Definition | Lactococcus lactis subsp. lactis Il1403, complete genome. |
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Accession | NC_002662 |
Length | 2,365,589 |
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The map label for this gene is ynaE
Identifier: 30024032
GI number: 30024032
Start: 1307010
End: 1307630
Strand: Reverse
Name: ynaE
Synonym: L106755
Alternate gene names: 30024032
Gene position: 1307630-1307010 (Counterclockwise)
Preceding gene: 30024033
Following gene: 15673255
Centisome position: 55.28
GC content: 35.75
Gene sequence:
>621_bases ATGTCTAAAACACGTCGGATGGTGTTAATTGCCATGCTTGCTGCATTATCAACAATCTTATTATTGCCGATTTTGCAGTT TCCGCTATTGCCTGGAATTGATTTTATGAAAGTTGAACTCTCAATCATTCCAGTACTTATTGGAGTCTTTACTTTGGGAT TGGGTGATGGATTTATAATCCTCTTTATTCGCTCTATCTTATGGTATCTCCTATTTAATCAAGGGCCATCAACTTGGATT GGTGTGCCGATGAACTTCATTGCTTTGGGAATCTTCATGGCAATTGTTTGGTTCTTTACAAAGAAAAAATTCTCAATCAA AAACTATACAGTTGGTGTGGTTTTAGCAGCCATCGCATCAGTTCTTGTGATGATGGTATTGAATGTTTTCTACGCACTCC CTCTCTATCGTTTAGCTGCTGGCTTCGATGTTGATAAGATTTTTGTTGGAGCAACTCATCTTTTTAATATGGGTTCTCTA TCAGTTACTTTGAATCCAACTTATCTTTTAACAGTAGTTTTACCTTTTAATGCTTTGCAGTACATCATCTTTGCTCTGGT ATTTGGATTGATTGTTGCAGTGTTCAAGAAAAACAAAGTCGTAAAATTTTATAATGCTTAA
Upstream 100 bases:
>100_bases AATCAACTTCGGTTGGATTACTGTTTTTAGCCAAACCAAAAATGTCTATCAACTTCCTCGAAATTTGAAGAATTATTTTC TCATATTTGGAGGTTTTTTT
Downstream 100 bases:
>100_bases TAAAAAAAGAAATTTCATTGATTTGAAGTTTCTTTTTTTATTTAAATAGTAAATAAGTGGGAATCTCAATTCATAGAGTC TGTTTTAAACGCTTTCTTTA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 206; Mature: 205
Protein sequence:
>206_residues MSKTRRMVLIAMLAALSTILLLPILQFPLLPGIDFMKVELSIIPVLIGVFTLGLGDGFIILFIRSILWYLLFNQGPSTWI GVPMNFIALGIFMAIVWFFTKKKFSIKNYTVGVVLAAIASVLVMMVLNVFYALPLYRLAAGFDVDKIFVGATHLFNMGSL SVTLNPTYLLTVVLPFNALQYIIFALVFGLIVAVFKKNKVVKFYNA
Sequences:
>Translated_206_residues MSKTRRMVLIAMLAALSTILLLPILQFPLLPGIDFMKVELSIIPVLIGVFTLGLGDGFIILFIRSILWYLLFNQGPSTWI GVPMNFIALGIFMAIVWFFTKKKFSIKNYTVGVVLAAIASVLVMMVLNVFYALPLYRLAAGFDVDKIFVGATHLFNMGSL SVTLNPTYLLTVVLPFNALQYIIFALVFGLIVAVFKKNKVVKFYNA >Mature_205_residues SKTRRMVLIAMLAALSTILLLPILQFPLLPGIDFMKVELSIIPVLIGVFTLGLGDGFIILFIRSILWYLLFNQGPSTWIG VPMNFIALGIFMAIVWFFTKKKFSIKNYTVGVVLAAIASVLVMMVLNVFYALPLYRLAAGFDVDKIFVGATHLFNMGSLS VTLNPTYLLTVVLPFNALQYIIFALVFGLIVAVFKKNKVVKFYNA
Specific function: Mediates riboflavin uptake, probably via a facilitated diffusion mechanism. May also transport FMN and roseoflavin [H]
COG id: COG3601
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the prokaryotic riboflavin transporter (P- RFT) (TC 2.A.87) family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22955; Mature: 22823
Theoretical pI: Translated: 10.53; Mature: 10.53
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.4 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.9 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKTRRMVLIAMLAALSTILLLPILQFPLLPGIDFMKVELSIIPVLIGVFTLGLGDGFII CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHH LFIRSILWYLLFNQGPSTWIGVPMNFIALGIFMAIVWFFTKKKFSIKNYTVGVVLAAIAS HHHHHHHHHHHHCCCCCCEECCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHH VLVMMVLNVFYALPLYRLAAGFDVDKIFVGATHLFNMGSLSVTLNPTYLLTVVLPFNALQ HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCEEEEECCCEEEEEHHHHHHHH YIIFALVFGLIVAVFKKNKVVKFYNA HHHHHHHHHHHHHHHHCCCEEEEECC >Mature Secondary Structure SKTRRMVLIAMLAALSTILLLPILQFPLLPGIDFMKVELSIIPVLIGVFTLGLGDGFII CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHH LFIRSILWYLLFNQGPSTWIGVPMNFIALGIFMAIVWFFTKKKFSIKNYTVGVVLAAIAS HHHHHHHHHHHHCCCCCCEECCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHH VLVMMVLNVFYALPLYRLAAGFDVDKIFVGATHLFNMGSLSVTLNPTYLLTVVLPFNALQ HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCEEEEECCCEEEEEHHHHHHHH YIIFALVFGLIVAVFKKNKVVKFYNA HHHHHHHHHHHHHHHHCCCEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA