Definition Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome.
Accession NC_004663
Length 6,260,361

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The map label for this gene is 29349707

Identifier: 29349707

GI number: 29349707

Start: 5665786

End: 5667273

Strand: Reverse

Name: 29349707

Synonym: BT_4299

Alternate gene names: NA

Gene position: 5667273-5665786 (Counterclockwise)

Preceding gene: 29349708

Following gene: 29349706

Centisome position: 90.53

GC content: 42.94

Gene sequence:

>1488_bases
ATGCGAAAAAGAAGAGTTTATTGGACGCTGTTCATTACAGCTTTCGCGTGGTTAGCTTCCTGTTCAGATGACGACATCAA
TGGAAGCAGCGGGTTCAACCCAAACCAGCCTATTGAGATCACAGAATTTTATCCTGATTCCGGAGGTATAGCCACTCCGA
TGATCATCGAAGGCCGCAACTTCGGTACAGACACCACTGGCATGAAAGTCTATTTTGAAGATGTAGACGGGATCAGACAT
CCTGCCGGATTAGTCAGCAGTAACGGTAGCAGAATCTATGCATTTGTTCCCAAAGGACTCACCTTCAAAAGAGAGATGAA
TATTCTTGTAGAAAGAAGAACGCCCGACGGTCAAGAATACATAGGCAAAGCACCAGACCAATTCCTATACAAGACACAAA
CCAGTGTTAGTACGGTAGCAGGACTTGCATCACCGGACAATAATATAAACACCGTTGGTGGTGACCTTGCCACATGTACT
TTCTCCTCTCCTTTCTATCTCTGTATAGACGGTGAAGACAATATATTTGTGGTAGACCGTAAAGGAGACAGTGGAAAAGA
CAAACAACCAAACACAACCTGCCGTAATGAAAAAGGTGAAGGCGTAAACGGAAACATTTCAATGATTTCCATCGCCAGCA
ATTCTTCCATTGTATTAAAATATGGAACTGCATATATTAATGCACCTGCTTATTCTGATGAAAAAGATGCTGAAGCTGTT
TACATTCCGGATGATGCCGGCATGAAATATTATGATATGCAAAAACTTCTAAATTATGTTCCCCGATATAGAACAGTCTT
GAAATCAGAAGAACTCAGCACCGTAGACGAAAACAACTGGAAGCATTGCTTTGTAATCAACAAGCTGGATCATATGATCT
ATACGGTCATGTGGAAAGGGCAATTGGTTCGAATCAATCCTAAAAACCGTACAGCAGAAATTTTGCTAAAGAAAATATCT
AATGTAGCAACAGGCGACGGCGGCAAAGCAGGAAGTGACTCCTATATCGCATTCAGCCCTATTAAAGGAGAAGAAAACGT
ACTCTATGTATCTCTTGCAGATTTTCACCAGATTTGGAGAGTGGACGTATCCAAGATCACTCCGGAAGATAAAGACACTT
ATAACGGAGAATCATACGCAGGAAAAGCAATCTACGAAGGAGTTATGAACGGGAAGGGCTGGGAAGACGGCTTGCTGAAG
AACGCCAAATTCAGACACCCGCGCCAGATTTGTTTCACCGACGACGGAAAAATGTACATTGCTGACAGTGGTAATTCCTG
CATCCGCGTAATAGATACTACTATGCCGAAAGAAAGAGCAGCCGTAACCACACCTATCGGTCTGCCGGGAGCGGAAGGTT
ATAAGGATGGAGGTCCGGAAATTGCCAAATTCCACTTCCCTTGCGGAGTAGCAGTCAACAGTGATGGAACTATTGTATAT
GTAGCCGACACACAGAACAAAGTGATTCGTAAATTATCCATTGAATAA

Upstream 100 bases:

>100_bases
CATACCCTAGTTCTACCCACATAGTAGACACACAAGAGTAGGTTTCCCTATCACTTTTTTTTAACCAATCTAATTATTAA
CCTTTTATCACAGAAAAACA

Downstream 100 bases:

>100_bases
CCTTATACAAAATACAATATGAGAAATAATTTTCTACTGATTGTACTGATCATGGCGCTTATACCGCTGACGAGTTACAG
TCAAGACAATAAGAAAAAAC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 495; Mature: 495

Protein sequence:

>495_residues
MRKRRVYWTLFITAFAWLASCSDDDINGSSGFNPNQPIEITEFYPDSGGIATPMIIEGRNFGTDTTGMKVYFEDVDGIRH
PAGLVSSNGSRIYAFVPKGLTFKREMNILVERRTPDGQEYIGKAPDQFLYKTQTSVSTVAGLASPDNNINTVGGDLATCT
FSSPFYLCIDGEDNIFVVDRKGDSGKDKQPNTTCRNEKGEGVNGNISMISIASNSSIVLKYGTAYINAPAYSDEKDAEAV
YIPDDAGMKYYDMQKLLNYVPRYRTVLKSEELSTVDENNWKHCFVINKLDHMIYTVMWKGQLVRINPKNRTAEILLKKIS
NVATGDGGKAGSDSYIAFSPIKGEENVLYVSLADFHQIWRVDVSKITPEDKDTYNGESYAGKAIYEGVMNGKGWEDGLLK
NAKFRHPRQICFTDDGKMYIADSGNSCIRVIDTTMPKERAAVTTPIGLPGAEGYKDGGPEIAKFHFPCGVAVNSDGTIVY
VADTQNKVIRKLSIE

Sequences:

>Translated_495_residues
MRKRRVYWTLFITAFAWLASCSDDDINGSSGFNPNQPIEITEFYPDSGGIATPMIIEGRNFGTDTTGMKVYFEDVDGIRH
PAGLVSSNGSRIYAFVPKGLTFKREMNILVERRTPDGQEYIGKAPDQFLYKTQTSVSTVAGLASPDNNINTVGGDLATCT
FSSPFYLCIDGEDNIFVVDRKGDSGKDKQPNTTCRNEKGEGVNGNISMISIASNSSIVLKYGTAYINAPAYSDEKDAEAV
YIPDDAGMKYYDMQKLLNYVPRYRTVLKSEELSTVDENNWKHCFVINKLDHMIYTVMWKGQLVRINPKNRTAEILLKKIS
NVATGDGGKAGSDSYIAFSPIKGEENVLYVSLADFHQIWRVDVSKITPEDKDTYNGESYAGKAIYEGVMNGKGWEDGLLK
NAKFRHPRQICFTDDGKMYIADSGNSCIRVIDTTMPKERAAVTTPIGLPGAEGYKDGGPEIAKFHFPCGVAVNSDGTIVY
VADTQNKVIRKLSIE
>Mature_495_residues
MRKRRVYWTLFITAFAWLASCSDDDINGSSGFNPNQPIEITEFYPDSGGIATPMIIEGRNFGTDTTGMKVYFEDVDGIRH
PAGLVSSNGSRIYAFVPKGLTFKREMNILVERRTPDGQEYIGKAPDQFLYKTQTSVSTVAGLASPDNNINTVGGDLATCT
FSSPFYLCIDGEDNIFVVDRKGDSGKDKQPNTTCRNEKGEGVNGNISMISIASNSSIVLKYGTAYINAPAYSDEKDAEAV
YIPDDAGMKYYDMQKLLNYVPRYRTVLKSEELSTVDENNWKHCFVINKLDHMIYTVMWKGQLVRINPKNRTAEILLKKIS
NVATGDGGKAGSDSYIAFSPIKGEENVLYVSLADFHQIWRVDVSKITPEDKDTYNGESYAGKAIYEGVMNGKGWEDGLLK
NAKFRHPRQICFTDDGKMYIADSGNSCIRVIDTTMPKERAAVTTPIGLPGAEGYKDGGPEIAKFHFPCGVAVNSDGTIVY
VADTQNKVIRKLSIE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 54741; Mature: 54741

Theoretical pI: Translated: 5.57; Mature: 5.57

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRKRRVYWTLFITAFAWLASCSDDDINGSSGFNPNQPIEITEFYPDSGGIATPMIIEGRN
CCCCEEEEEHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCEEEECCC
FGTDTTGMKVYFEDVDGIRHPAGLVSSNGSRIYAFVPKGLTFKREMNILVERRTPDGQEY
CCCCCCCEEEEEECCCCCCCCCCCEECCCCEEEEECCCCCEEEEEEEEEEEECCCCCHHH
IGKAPDQFLYKTQTSVSTVAGLASPDNNINTVGGDLATCTFSSPFYLCIDGEDNIFVVDR
HCCCCHHHEEECCCCHHHHHCCCCCCCCCEECCCCEEEEEECCCEEEEEECCCCEEEEEC
KGDSGKDKQPNTTCRNEKGEGVNGNISMISIASNSSIVLKYGTAYINAPAYSDEKDAEAV
CCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCEEEEEECCEEEECCCCCCCCCCCEE
YIPDDAGMKYYDMQKLLNYVPRYRTVLKSEELSTVDENNWKHCFVINKLDHMIYTVMWKG
EECCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEECCCCEEEEEEECC
QLVRINPKNRTAEILLKKISNVATGDGGKAGSDSYIAFSPIKGEENVLYVSLADFHQIWR
EEEEECCCCCHHHHHHHHHHHCCCCCCCCCCCCCEEEEECCCCCCCEEEEEEHHHHHHHE
VDVSKITPEDKDTYNGESYAGKAIYEGVMNGKGWEDGLLKNAKFRHPRQICFTDDGKMYI
EEHHHCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCHHHCCCCCCCCCEEEEECCCCEEE
ADSGNSCIRVIDTTMPKERAAVTTPIGLPGAEGYKDGGPEIAKFHFPCGVAVNSDGTIVY
EECCCCEEEEEECCCCCCCCEEECCCCCCCCCCCCCCCCCEEEEECCCEEEECCCCEEEE
VADTQNKVIRKLSIE
EECCCCHHHHEECCC
>Mature Secondary Structure
MRKRRVYWTLFITAFAWLASCSDDDINGSSGFNPNQPIEITEFYPDSGGIATPMIIEGRN
CCCCEEEEEHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCEEEECCC
FGTDTTGMKVYFEDVDGIRHPAGLVSSNGSRIYAFVPKGLTFKREMNILVERRTPDGQEY
CCCCCCCEEEEEECCCCCCCCCCCEECCCCEEEEECCCCCEEEEEEEEEEEECCCCCHHH
IGKAPDQFLYKTQTSVSTVAGLASPDNNINTVGGDLATCTFSSPFYLCIDGEDNIFVVDR
HCCCCHHHEEECCCCHHHHHCCCCCCCCCEECCCCEEEEEECCCEEEEEECCCCEEEEEC
KGDSGKDKQPNTTCRNEKGEGVNGNISMISIASNSSIVLKYGTAYINAPAYSDEKDAEAV
CCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCEEEEEECCEEEECCCCCCCCCCCEE
YIPDDAGMKYYDMQKLLNYVPRYRTVLKSEELSTVDENNWKHCFVINKLDHMIYTVMWKG
EECCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEECCCCEEEEEEECC
QLVRINPKNRTAEILLKKISNVATGDGGKAGSDSYIAFSPIKGEENVLYVSLADFHQIWR
EEEEECCCCCHHHHHHHHHHHCCCCCCCCCCCCCEEEEECCCCCCCEEEEEEHHHHHHHE
VDVSKITPEDKDTYNGESYAGKAIYEGVMNGKGWEDGLLKNAKFRHPRQICFTDDGKMYI
EEHHHCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCHHHCCCCCCCCCEEEEECCCCEEE
ADSGNSCIRVIDTTMPKERAAVTTPIGLPGAEGYKDGGPEIAKFHFPCGVAVNSDGTIVY
EECCCCEEEEEECCCCCCCCEEECCCCCCCCCCCCCCCCCEEEEECCCEEEECCCCEEEE
VADTQNKVIRKLSIE
EECCCCHHHHEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA