Definition Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome.
Accession NC_004663
Length 6,260,361

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The map label for this gene is 29349705

Identifier: 29349705

GI number: 29349705

Start: 5660608

End: 5662659

Strand: Reverse

Name: 29349705

Synonym: BT_4297

Alternate gene names: NA

Gene position: 5662659-5660608 (Counterclockwise)

Preceding gene: 29349706

Following gene: 29349704

Centisome position: 90.45

GC content: 46.54

Gene sequence:

>2052_bases
ATGAAAAAGTTATTCAAAATAATATTGGGAGCAACAGTAGGAAGTACACTACTACTCAGTTCCTGCAATTTTCTGGATGT
AGACCCATACTTCGAAGCTACTTTCAAAGAAGACTCCATCTTTCACAGCAAGAAAAATGCTGAAGGTTATCTCTGGAACA
CTCCGAAAGGTTTTCCCGACGCAGGGGCTATCTGGGGAAATTCCTGGAATCCGGGGGAATCTGCTTCGGACGAAATAACA
CTTAAATATCAGACAAATGAATTTTGGGGACTACAATTTTCCGTAGGTACCATCAACAGCAGAAATCTGCCTATCCAAAA
CCAATGGTACGACATGTATGTCATTGTAGCAAGATGTAACAAAATGCTTAAAGAAGTCTACAATGTACCTGATATGAACG
AAATGGACAGAAGACGTTATATCGGATATGTTCACTTTATGCGTGGGTACGCTTATTATCATCTTTTGATGAACTGGGGA
CCGTTGATTATCGTGGGCGATGAAGAACTGAGCACCTCCGAACCTGCCGAATATTATAATCGCGAACGGGCTACCTATGA
TGAGTCTGTAGATTATATATGCGATGAATTCCGCCTGGCAACTCAAGGCATCTATTCGGCGGATGAGCAAAGCGTCAACT
ATTATCAACGTCCGACCAAAGGAGCAGCCATGGCACTCATCGCCCGTTTGCGCCTCTTCCAGGCTTCACCGCTTTTCAAT
GGCGGAGCTGCAGCCCGTAAATGTTTCGGGACCTGGAAACGTAAAAGCGACGGAGCCTACTATGTCAATCAAGAGTATGA
CCCGAGACGCTGGGCCGTTGCAGCAGCTGCCGCCAAACAGCTGACCAAAATGGGATACGAGCTACATACAGTGGAAGCAG
ATGCCCAGAACCCATATCCTCTGGCCTCCAATGTCCCTACTGCTAACTTCCCTGACGGAGCAGGCAATATCGATCCTTAT
CACTCTTACTCCGACATGTTCACAGGAGAAGGTATCATACAGACTAATAAAGAATTCATCTGGGCGATGGAATCCAGTAA
CGTCACTAACTATACCCATCACTCATTCCCTGTCAAGTTTGGCGGATGGGGTTCAATGTCTGTGCCGCAGAGGGTAATTG
ATTGCTATCTGATGGCAGATGGGCGGACTATTCATAATTCATCGGCAGAATATCCATATGAACCGGACTTCAGCAGACTC
ACCGGCGAATCCAAAAAACTGGGGACATACCTACTGAGGGAAAACGTACCTATGATGTACGCCAATCGTTCGGCACGCTT
CTATGCCTCGATAGGTTTTCCGGGTCGCTACTGGCCGATGAGTTCAGCTTCTACCGACGCCTCCTACGTCAATCAGCAAT
TCTGGTATTCTCACGATGATACCAATGCCGGAATTGCCGGTGCCGGAAATAACGTAAACGACTACAGTGTCAGCGGTTAT
GTTCCCGTCAAATACATTCATCCGGACGACTCATGGGCTAACGGCAAAGGGAGTGTAAAAGGCGCATTCGTCACCAGCCC
TAAACCGTTCCCTATCATTCGTTATGGTGAAGTGCTACTGGAATATGTAGAAGCATTGAACCGTGTAGAAGGTACAGTGA
CCGTAGAAGTATCCGACAATACAGGTACACTTATTGAGGAAACCGTTAGCCGTGATCCGGCAGAAATGGCTAAATATTTC
AACATGATACGTTATCGCGTCGGCTTGCCGGGAGTAGATGCCAACGACATGGCAGAAGCAGACAATTTTGAAAAAATCAT
CCGCAATGAACGTCAGGTAGAGCTCTTTAACGAAGGATACCGATATTTCGATACGCGCAGATGGGGAACCTATCTGGACG
AAGATGCCAACAGCTCCAACTGGCGGGGACTGGATGTGACAAAAGACCGTACAAATGCCAACGGTAATGAAGGATTCTGG
AATATTGTGACGATCAATACACAAAATGTGCGAGACCGCATTGCACTGCCTAAAATGGTATTCTTACCGATCCGCCATGA
TGAATTGCTGAAGGTTCCCAATGCCGACCAGAATTTCGGATGGGACAGATAA

Upstream 100 bases:

>100_bases
TGATCCGGAACAGGCATCTGCAAACGGGGCCGCTTATCCGATACCGGCAACTTACACGTTCCAGGTTTATCTTAAATTCT
AAAAATAATATAGAACACTC

Downstream 100 bases:

>100_bases
TATCAAAACATGAATAACAGACTGAATATGAAAAAGAAATTTAATATAATGCTCTGCACCCTTATAGGTGTATTGAGTGC
TTGCAATGAATACGATTTCG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 683; Mature: 683

Protein sequence:

>683_residues
MKKLFKIILGATVGSTLLLSSCNFLDVDPYFEATFKEDSIFHSKKNAEGYLWNTPKGFPDAGAIWGNSWNPGESASDEIT
LKYQTNEFWGLQFSVGTINSRNLPIQNQWYDMYVIVARCNKMLKEVYNVPDMNEMDRRRYIGYVHFMRGYAYYHLLMNWG
PLIIVGDEELSTSEPAEYYNRERATYDESVDYICDEFRLATQGIYSADEQSVNYYQRPTKGAAMALIARLRLFQASPLFN
GGAAARKCFGTWKRKSDGAYYVNQEYDPRRWAVAAAAAKQLTKMGYELHTVEADAQNPYPLASNVPTANFPDGAGNIDPY
HSYSDMFTGEGIIQTNKEFIWAMESSNVTNYTHHSFPVKFGGWGSMSVPQRVIDCYLMADGRTIHNSSAEYPYEPDFSRL
TGESKKLGTYLLRENVPMMYANRSARFYASIGFPGRYWPMSSASTDASYVNQQFWYSHDDTNAGIAGAGNNVNDYSVSGY
VPVKYIHPDDSWANGKGSVKGAFVTSPKPFPIIRYGEVLLEYVEALNRVEGTVTVEVSDNTGTLIEETVSRDPAEMAKYF
NMIRYRVGLPGVDANDMAEADNFEKIIRNERQVELFNEGYRYFDTRRWGTYLDEDANSSNWRGLDVTKDRTNANGNEGFW
NIVTINTQNVRDRIALPKMVFLPIRHDELLKVPNADQNFGWDR

Sequences:

>Translated_683_residues
MKKLFKIILGATVGSTLLLSSCNFLDVDPYFEATFKEDSIFHSKKNAEGYLWNTPKGFPDAGAIWGNSWNPGESASDEIT
LKYQTNEFWGLQFSVGTINSRNLPIQNQWYDMYVIVARCNKMLKEVYNVPDMNEMDRRRYIGYVHFMRGYAYYHLLMNWG
PLIIVGDEELSTSEPAEYYNRERATYDESVDYICDEFRLATQGIYSADEQSVNYYQRPTKGAAMALIARLRLFQASPLFN
GGAAARKCFGTWKRKSDGAYYVNQEYDPRRWAVAAAAAKQLTKMGYELHTVEADAQNPYPLASNVPTANFPDGAGNIDPY
HSYSDMFTGEGIIQTNKEFIWAMESSNVTNYTHHSFPVKFGGWGSMSVPQRVIDCYLMADGRTIHNSSAEYPYEPDFSRL
TGESKKLGTYLLRENVPMMYANRSARFYASIGFPGRYWPMSSASTDASYVNQQFWYSHDDTNAGIAGAGNNVNDYSVSGY
VPVKYIHPDDSWANGKGSVKGAFVTSPKPFPIIRYGEVLLEYVEALNRVEGTVTVEVSDNTGTLIEETVSRDPAEMAKYF
NMIRYRVGLPGVDANDMAEADNFEKIIRNERQVELFNEGYRYFDTRRWGTYLDEDANSSNWRGLDVTKDRTNANGNEGFW
NIVTINTQNVRDRIALPKMVFLPIRHDELLKVPNADQNFGWDR
>Mature_683_residues
MKKLFKIILGATVGSTLLLSSCNFLDVDPYFEATFKEDSIFHSKKNAEGYLWNTPKGFPDAGAIWGNSWNPGESASDEIT
LKYQTNEFWGLQFSVGTINSRNLPIQNQWYDMYVIVARCNKMLKEVYNVPDMNEMDRRRYIGYVHFMRGYAYYHLLMNWG
PLIIVGDEELSTSEPAEYYNRERATYDESVDYICDEFRLATQGIYSADEQSVNYYQRPTKGAAMALIARLRLFQASPLFN
GGAAARKCFGTWKRKSDGAYYVNQEYDPRRWAVAAAAAKQLTKMGYELHTVEADAQNPYPLASNVPTANFPDGAGNIDPY
HSYSDMFTGEGIIQTNKEFIWAMESSNVTNYTHHSFPVKFGGWGSMSVPQRVIDCYLMADGRTIHNSSAEYPYEPDFSRL
TGESKKLGTYLLRENVPMMYANRSARFYASIGFPGRYWPMSSASTDASYVNQQFWYSHDDTNAGIAGAGNNVNDYSVSGY
VPVKYIHPDDSWANGKGSVKGAFVTSPKPFPIIRYGEVLLEYVEALNRVEGTVTVEVSDNTGTLIEETVSRDPAEMAKYF
NMIRYRVGLPGVDANDMAEADNFEKIIRNERQVELFNEGYRYFDTRRWGTYLDEDANSSNWRGLDVTKDRTNANGNEGFW
NIVTINTQNVRDRIALPKMVFLPIRHDELLKVPNADQNFGWDR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 77763; Mature: 77763

Theoretical pI: Translated: 5.17; Mature: 5.17

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKLFKIILGATVGSTLLLSSCNFLDVDPYFEATFKEDSIFHSKKNAEGYLWNTPKGFPD
CHHHHHHHHHHHHHHHHHHHCCCEEECCCCHHEECCCCCCCCCCCCCCCEEECCCCCCCC
AGAIWGNSWNPGESASDEITLKYQTNEFWGLQFSVGTINSRNLPIQNQWYDMYVIVARCN
CCCCCCCCCCCCCCCCCEEEEEEECCCEEEEEEEEEECCCCCCCCCCCCHHHHHHHHHHH
KMLKEVYNVPDMNEMDRRRYIGYVHFMRGYAYYHLLMNWGPLIIVGDEELSTSEPAEYYN
HHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCHHHHC
RERATYDESVDYICDEFRLATQGIYSADEQSVNYYQRPTKGAAMALIARLRLFQASPLFN
CCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHCCCCCHHHHHHHHHHHHHHCCCCCC
GGAAARKCFGTWKRKSDGAYYVNQEYDPRRWAVAAAAAKQLTKMGYELHTVEADAQNPYP
CCHHHHHHHHHHCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCC
LASNVPTANFPDGAGNIDPYHSYSDMFTGEGIIQTNKEFIWAMESSNVTNYTHHSFPVKF
CCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCEEEECCEEEEEEECCCCCCEECCCCCEEE
GGWGSMSVPQRVIDCYLMADGRTIHNSSAEYPYEPDFSRLTGESKKLGTYLLRENVPMMY
CCCCCCCHHHHHEEEEEEECCEEEECCCCCCCCCCCHHHHCCCCHHHHHHHHHCCCCEEE
ANRSARFYASIGFPGRYWPMSSASTDASYVNQQFWYSHDDTNAGIAGAGNNVNDYSVSGY
ECCCEEEEEEECCCCCCCCCCCCCCCHHHHHHHHEECCCCCCCCEECCCCCCCCEEECCE
VPVKYIHPDDSWANGKGSVKGAFVTSPKPFPIIRYGEVLLEYVEALNRVEGTVTVEVSDN
EEEEEECCCCCCCCCCCCEEEEEECCCCCCCEEHHHHHHHHHHHHHHHCCCEEEEEECCC
TGTLIEETVSRDPAEMAKYFNMIRYRVGLPGVDANDMAEADNFEKIIRNERQVELFNEGY
CCCHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCEEEEHHCCC
RYFDTRRWGTYLDEDANSSNWRGLDVTKDRTNANGNEGFWNIVTINTQNVRDRIALPKMV
CEEECCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCEEEEEEEECCCCHHHHCCCCEE
FLPIRHDELLKVPNADQNFGWDR
EEECCCHHHEECCCCCCCCCCCC
>Mature Secondary Structure
MKKLFKIILGATVGSTLLLSSCNFLDVDPYFEATFKEDSIFHSKKNAEGYLWNTPKGFPD
CHHHHHHHHHHHHHHHHHHHCCCEEECCCCHHEECCCCCCCCCCCCCCCEEECCCCCCCC
AGAIWGNSWNPGESASDEITLKYQTNEFWGLQFSVGTINSRNLPIQNQWYDMYVIVARCN
CCCCCCCCCCCCCCCCCEEEEEEECCCEEEEEEEEEECCCCCCCCCCCCHHHHHHHHHHH
KMLKEVYNVPDMNEMDRRRYIGYVHFMRGYAYYHLLMNWGPLIIVGDEELSTSEPAEYYN
HHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCHHHHC
RERATYDESVDYICDEFRLATQGIYSADEQSVNYYQRPTKGAAMALIARLRLFQASPLFN
CCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHCCCCCHHHHHHHHHHHHHHCCCCCC
GGAAARKCFGTWKRKSDGAYYVNQEYDPRRWAVAAAAAKQLTKMGYELHTVEADAQNPYP
CCHHHHHHHHHHCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCC
LASNVPTANFPDGAGNIDPYHSYSDMFTGEGIIQTNKEFIWAMESSNVTNYTHHSFPVKF
CCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCEEEECCEEEEEEECCCCCCEECCCCCEEE
GGWGSMSVPQRVIDCYLMADGRTIHNSSAEYPYEPDFSRLTGESKKLGTYLLRENVPMMY
CCCCCCCHHHHHEEEEEEECCEEEECCCCCCCCCCCHHHHCCCCHHHHHHHHHCCCCEEE
ANRSARFYASIGFPGRYWPMSSASTDASYVNQQFWYSHDDTNAGIAGAGNNVNDYSVSGY
ECCCEEEEEEECCCCCCCCCCCCCCCHHHHHHHHEECCCCCCCCEECCCCCCCCEEECCE
VPVKYIHPDDSWANGKGSVKGAFVTSPKPFPIIRYGEVLLEYVEALNRVEGTVTVEVSDN
EEEEEECCCCCCCCCCCCEEEEEECCCCCCCEEHHHHHHHHHHHHHHHCCCEEEEEECCC
TGTLIEETVSRDPAEMAKYFNMIRYRVGLPGVDANDMAEADNFEKIIRNERQVELFNEGY
CCCHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCEEEEHHCCC
RYFDTRRWGTYLDEDANSSNWRGLDVTKDRTNANGNEGFWNIVTINTQNVRDRIALPKMV
CEEECCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCEEEEEEEECCCCHHHHCCCCEE
FLPIRHDELLKVPNADQNFGWDR
EEECCCHHHEECCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA