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The map label for this gene is ctpA [H]

Identifier: 29349667

GI number: 29349667

Start: 5608883

End: 5610631

Strand: Reverse

Name: ctpA [H]

Synonym: BT_4259

Alternate gene names: 29349667

Gene position: 5610631-5608883 (Counterclockwise)

Preceding gene: 29349668

Following gene: 29349666

Centisome position: 89.62

GC content: 46.54

Gene sequence:

>1749_bases
ATGAGTACAAGAAACTCTTCACGTTTTACGCCTATCATCATAGCTATCAGCGTGGTGGCCGGTATTCTTATCGGTACATT
TTATGCCAAGCACTTCGCCGGCAACCGTCTGGGTATCATCAACGGTTCTTCCAACAAGCTGAATGCGCTGTTGAGAATCG
TAGATGATCAATATGTAGACACCGTAAACATGACCGACCTCGTGGAGAAGGCTATGCCACAGATCCTGGCAGAACTGGAC
CCGCACTCCACTTACATCCCTGCACAGAATCTCGAAGAAGTCAATTCGGAACTGGAAGGCAGTTTCAGCGGAATCGGTAT
CCAGTTTACGATACAGAATGATACGATTCATGTGAATGCCGTTATCCAGGGAGGCCCATCTGAAAAAGTGGGACTCATGG
CGGGCGACCGCATCGTTAATGTAGACGACAGTTTATTTGTAGGCAAAAAGCTGAACAACGAACTAGCCATGCGCACACTG
AAAGGTCCTAAGGGATCGCAGGTGAAACTGGGTGTCAAACGCGTAGGAGAACCGAAATTGCTGGACTTCACCATCACCCG
CGGAGACATTCCTCAAAATACAGTAGACGCTGCCTATATGCTGAACGATGATATCGGTTATGTAAAAGTCAGCAAATTCG
GACGGACAAGCCACGTAGAATTGCTTAACGCCTTGGCCCAGCTCAATCATAAGAAATGTAAAGGACTGATTATTGACCTT
CGCGGCAATACAGGAGGATACATGGAAGCTGCCATCCGCATGGTGAATGAATTCCTGCCCGAAGGTAAACTGATTGTATA
TACACAAGGACGTAAATATCCCCGTGCGGAAGAATTTGCCAACGGTACGGGCAGTTGCCAGAAAATGCCACTCGTTGTAT
TGATTGACGAGGGTTCTGCTTCTGCCAGCGAAATCTTTACCGGAGCAATTCAGGATAATGACCGCGGTACAGTGGTAGGA
CGCCGTTCCTTCGGAAAAGGACTGGTACAACAACCGATTGACTTCAGCGACGGCTCTGCTATCCGCCTGACTATCGCCCG
CTATTATACTCCTTCAGGGCGTTGCATCCAACGTCCTTACGAAAGTGGTAAAGACAAGAATTATGAACTAGACATATACA
ACCGCTACGAACACGGTGAGTTCTTCTCACGCGACAGCATCAAGCTGAACGAAAACGAACGCTATCTCACCAGCCTGGGA
CGCACTGTTTATGGTGGTGGCGGTATCATGCCGGATGTATTTGTACCACAAGATACTACCGGAGTCACTTCTTATCTCTC
ATCAGTAATCAACCGCGGACTAACTCTTCAGTTTACTTTCCAGTACACGGACAATAATCGGAAGAAGCTGAGCCAGTATG
AAACGGAAGAAGACCTGCTGAATTATCTTCGTCACCAAGGTTTGGTAGAGCAGTTCATCCGCTTTGCCGACTCGAAAGGT
GTAAAGAGAAGGAATATTCTGATCCAGAAATCGTATAAACGACTGGAAGCGAATATATACGGCAACATTATCTATAATAT
GCTGGGACTGGAAGCTTATCTGAAATACTTCAATAAATCGGATGCTACAGTTCAACAAGGTATAGAACTGCTCGAAAAAG
GAGAAGCTTTCCCAAAAGCACCCGCCGAGACAGAAGAGGAAGTGACGAAAGACAATAAAGATGGAAAGAAAAAAAGAACT
GCGCAAGCTTATGGCATCACTGAAGATCCGACACGCATCTTCGACTTTGCAGAAGCTACAATCAGCTAA

Upstream 100 bases:

>100_bases
CTATTAAAACGGGCAGGAATCGAAGTTATCTATACAGAAATGAACGAAGATTCTTCTCCAAACAAATAATAAAACGAACG
TTTTAAAAAAAGGAATAGAC

Downstream 100 bases:

>100_bases
AATACTTGCCGCCCTCGAAGCCCACCCGGCTTTCAGGGCGGCAACTACTGTATTGCTCTACCATTCGCTCAAAGATGAAG
TAGACACGCATGCGTTTATC

Product: carboxy-terminal processing protease

Products: NA

Alternate protein names: C-terminal-processing protease [H]

Number of amino acids: Translated: 582; Mature: 581

Protein sequence:

>582_residues
MSTRNSSRFTPIIIAISVVAGILIGTFYAKHFAGNRLGIINGSSNKLNALLRIVDDQYVDTVNMTDLVEKAMPQILAELD
PHSTYIPAQNLEEVNSELEGSFSGIGIQFTIQNDTIHVNAVIQGGPSEKVGLMAGDRIVNVDDSLFVGKKLNNELAMRTL
KGPKGSQVKLGVKRVGEPKLLDFTITRGDIPQNTVDAAYMLNDDIGYVKVSKFGRTSHVELLNALAQLNHKKCKGLIIDL
RGNTGGYMEAAIRMVNEFLPEGKLIVYTQGRKYPRAEEFANGTGSCQKMPLVVLIDEGSASASEIFTGAIQDNDRGTVVG
RRSFGKGLVQQPIDFSDGSAIRLTIARYYTPSGRCIQRPYESGKDKNYELDIYNRYEHGEFFSRDSIKLNENERYLTSLG
RTVYGGGGIMPDVFVPQDTTGVTSYLSSVINRGLTLQFTFQYTDNNRKKLSQYETEEDLLNYLRHQGLVEQFIRFADSKG
VKRRNILIQKSYKRLEANIYGNIIYNMLGLEAYLKYFNKSDATVQQGIELLEKGEAFPKAPAETEEEVTKDNKDGKKKRT
AQAYGITEDPTRIFDFAEATIS

Sequences:

>Translated_582_residues
MSTRNSSRFTPIIIAISVVAGILIGTFYAKHFAGNRLGIINGSSNKLNALLRIVDDQYVDTVNMTDLVEKAMPQILAELD
PHSTYIPAQNLEEVNSELEGSFSGIGIQFTIQNDTIHVNAVIQGGPSEKVGLMAGDRIVNVDDSLFVGKKLNNELAMRTL
KGPKGSQVKLGVKRVGEPKLLDFTITRGDIPQNTVDAAYMLNDDIGYVKVSKFGRTSHVELLNALAQLNHKKCKGLIIDL
RGNTGGYMEAAIRMVNEFLPEGKLIVYTQGRKYPRAEEFANGTGSCQKMPLVVLIDEGSASASEIFTGAIQDNDRGTVVG
RRSFGKGLVQQPIDFSDGSAIRLTIARYYTPSGRCIQRPYESGKDKNYELDIYNRYEHGEFFSRDSIKLNENERYLTSLG
RTVYGGGGIMPDVFVPQDTTGVTSYLSSVINRGLTLQFTFQYTDNNRKKLSQYETEEDLLNYLRHQGLVEQFIRFADSKG
VKRRNILIQKSYKRLEANIYGNIIYNMLGLEAYLKYFNKSDATVQQGIELLEKGEAFPKAPAETEEEVTKDNKDGKKKRT
AQAYGITEDPTRIFDFAEATIS
>Mature_581_residues
STRNSSRFTPIIIAISVVAGILIGTFYAKHFAGNRLGIINGSSNKLNALLRIVDDQYVDTVNMTDLVEKAMPQILAELDP
HSTYIPAQNLEEVNSELEGSFSGIGIQFTIQNDTIHVNAVIQGGPSEKVGLMAGDRIVNVDDSLFVGKKLNNELAMRTLK
GPKGSQVKLGVKRVGEPKLLDFTITRGDIPQNTVDAAYMLNDDIGYVKVSKFGRTSHVELLNALAQLNHKKCKGLIIDLR
GNTGGYMEAAIRMVNEFLPEGKLIVYTQGRKYPRAEEFANGTGSCQKMPLVVLIDEGSASASEIFTGAIQDNDRGTVVGR
RSFGKGLVQQPIDFSDGSAIRLTIARYYTPSGRCIQRPYESGKDKNYELDIYNRYEHGEFFSRDSIKLNENERYLTSLGR
TVYGGGGIMPDVFVPQDTTGVTSYLSSVINRGLTLQFTFQYTDNNRKKLSQYETEEDLLNYLRHQGLVEQFIRFADSKGV
KRRNILIQKSYKRLEANIYGNIIYNMLGLEAYLKYFNKSDATVQQGIELLEKGEAFPKAPAETEEEVTKDNKDGKKKRTA
QAYGITEDPTRIFDFAEATIS

Specific function: Involved in protection of the bacterium from thermal and osmotic stresses (Potential) [H]

COG id: COG0793

COG function: function code M; Periplasmic protease

Gene ontology:

Cell location: Secreted (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 PDZ (DHR) domain [H]

Homologues:

Organism=Escherichia coli, GI1788134, Length=324, Percent_Identity=32.0987654320988, Blast_Score=137, Evalue=1e-33,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001478
- InterPro:   IPR005151
- InterPro:   IPR004447 [H]

Pfam domain/function: PF00595 PDZ; PF03572 Peptidase_S41 [H]

EC number: =3.4.21.102 [H]

Molecular weight: Translated: 64795; Mature: 64664

Theoretical pI: Translated: 7.60; Mature: 7.60

Prosite motif: PS50106 PDZ

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSTRNSSRFTPIIIAISVVAGILIGTFYAKHFAGNRLGIINGSSNKLNALLRIVDDQYVD
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHHHCC
TVNMTDLVEKAMPQILAELDPHSTYIPAQNLEEVNSELEGSFSGIGIQFTIQNDTIHVNA
CCCHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHCCCCCCEEEEEEEECCEEEEEE
VIQGGPSEKVGLMAGDRIVNVDDSLFVGKKLNNELAMRTLKGPKGSQVKLGVKRVGEPKL
EEECCCCCCEEEEECCEEEECCCCEEECCCCCCHHHHHHCCCCCCCEEEEHHHHCCCCCE
LDFTITRGDIPQNTVDAAYMLNDDIGYVKVSKFGRTSHVELLNALAQLNHKKCKGLIIDL
EEEEEECCCCCCCCCCEEEEEECCCCEEEEECCCCCHHHHHHHHHHHCCCCCCCEEEEEE
RGNTGGYMEAAIRMVNEFLPEGKLIVYTQGRKYPRAEEFANGTGSCQKMPLVVLIDEGSA
ECCCCHHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHCCCCCCCCCCCEEEEECCCCC
SASEIFTGAIQDNDRGTVVGRRSFGKGLVQQPIDFSDGSAIRLTIARYYTPSGRCIQRPY
CHHHHEEEEECCCCCCEEEECHHHCCHHHHCCCCCCCCCEEEEEEEEEECCCCCHHHCCH
ESGKDKNYELDIYNRYEHGEFFSRDSIKLNENERYLTSLGRTVYGGGGIMPDVFVPQDTT
HCCCCCCEEEEEEECCCCCCCCCCCCEEECCCCHHHHHCCCEEECCCCCCCCCCCCCCCH
GVTSYLSSVINRGLTLQFTFQYTDNNRKKLSQYETEEDLLNYLRHQGLVEQFIRFADSKG
HHHHHHHHHHHCCEEEEEEEEECCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCC
VKRRNILIQKSYKRLEANIYGNIIYNMLGLEAYLKYFNKSDATVQQGIELLEKGEAFPKA
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCC
PAETEEEVTKDNKDGKKKRTAQAYGITEDPTRIFDFAEATIS
CCCCHHHHHCCCCCCHHHHHHHHCCCCCCCHHHHHHHHHHCC
>Mature Secondary Structure 
STRNSSRFTPIIIAISVVAGILIGTFYAKHFAGNRLGIINGSSNKLNALLRIVDDQYVD
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHHHCC
TVNMTDLVEKAMPQILAELDPHSTYIPAQNLEEVNSELEGSFSGIGIQFTIQNDTIHVNA
CCCHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHCCCCCCEEEEEEEECCEEEEEE
VIQGGPSEKVGLMAGDRIVNVDDSLFVGKKLNNELAMRTLKGPKGSQVKLGVKRVGEPKL
EEECCCCCCEEEEECCEEEECCCCEEECCCCCCHHHHHHCCCCCCCEEEEHHHHCCCCCE
LDFTITRGDIPQNTVDAAYMLNDDIGYVKVSKFGRTSHVELLNALAQLNHKKCKGLIIDL
EEEEEECCCCCCCCCCEEEEEECCCCEEEEECCCCCHHHHHHHHHHHCCCCCCCEEEEEE
RGNTGGYMEAAIRMVNEFLPEGKLIVYTQGRKYPRAEEFANGTGSCQKMPLVVLIDEGSA
ECCCCHHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHCCCCCCCCCCCEEEEECCCCC
SASEIFTGAIQDNDRGTVVGRRSFGKGLVQQPIDFSDGSAIRLTIARYYTPSGRCIQRPY
CHHHHEEEEECCCCCCEEEECHHHCCHHHHCCCCCCCCCEEEEEEEEEECCCCCHHHCCH
ESGKDKNYELDIYNRYEHGEFFSRDSIKLNENERYLTSLGRTVYGGGGIMPDVFVPQDTT
HCCCCCCEEEEEEECCCCCCCCCCCCEEECCCCHHHHHCCCEEECCCCCCCCCCCCCCCH
GVTSYLSSVINRGLTLQFTFQYTDNNRKKLSQYETEEDLLNYLRHQGLVEQFIRFADSKG
HHHHHHHHHHHCCEEEEEEEEECCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCC
VKRRNILIQKSYKRLEANIYGNIIYNMLGLEAYLKYFNKSDATVQQGIELLEKGEAFPKA
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCC
PAETEEEVTKDNKDGKKKRTAQAYGITEDPTRIFDFAEATIS
CCCCHHHHHCCCCCCHHHHHHHHCCCCCCCHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9141685 [H]