| Definition | Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome. |
|---|---|
| Accession | NC_004663 |
| Length | 6,260,361 |
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The map label for this gene is 29349629
Identifier: 29349629
GI number: 29349629
Start: 5558156
End: 5558653
Strand: Reverse
Name: 29349629
Synonym: BT_4221
Alternate gene names: NA
Gene position: 5558653-5558156 (Counterclockwise)
Preceding gene: 29349630
Following gene: 29349628
Centisome position: 88.79
GC content: 43.57
Gene sequence:
>498_bases ATGAGTCATACCATCTTCCTAATCATCGCCCTCGTCACTACAGGAATTTTTCTTATTCAATTCGTATTATCCATTTTCTT CGGAGACATAGATGCAGATGTGGACGTGGATGCTGATATCAGCAGCGTAGTATCTTTCAAAGGTCTCACCCACTTCGGGA TCGGATTCGGATGGTATATGTACCTCGTAGGAAATGCCGATATAGCAAGTTATGCAATCGGAATTCTGGTAGGTCTGTTC TTTGTCTTTGCCGTATGGTTCCTTTATAAGAAAGCCTATCAACTGCAGCAAGTGAACCGGTCTGAAGAGACCGATCAATT GGTAGGACGGGAATGTACCATTTACTTCAAGCAAAGTGATAACAAATATACCGTACAGACAAACCGGGACGGCGCCATGC GCGAAGTGGACGTGATCTCCGAAACCGGAAAAGCATATCAGACCGGAGACAGAACAATCATCAGCAGCTACAAAGACGGA ACTTTATACATTAAATAA
Upstream 100 bases:
>100_bases AAACATATCTACTTTTTATCACATTATCTTTGTTTATCTCTTATAAACCTGTATATTTGGAGTATTATAACTGATACATT TATATTAATACAGAATTACT
Downstream 100 bases:
>100_bases CTATTCAAATACACAATTTTATGACACAAGAAATGCTAATCATGGCTGCTATACTAGTGGCGGTCATTCTGCTTACTTTT ATCGGTATCCTGTCGCGTTA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 165; Mature: 164
Protein sequence:
>165_residues MSHTIFLIIALVTTGIFLIQFVLSIFFGDIDADVDVDADISSVVSFKGLTHFGIGFGWYMYLVGNADIASYAIGILVGLF FVFAVWFLYKKAYQLQQVNRSEETDQLVGRECTIYFKQSDNKYTVQTNRDGAMREVDVISETGKAYQTGDRTIISSYKDG TLYIK
Sequences:
>Translated_165_residues MSHTIFLIIALVTTGIFLIQFVLSIFFGDIDADVDVDADISSVVSFKGLTHFGIGFGWYMYLVGNADIASYAIGILVGLF FVFAVWFLYKKAYQLQQVNRSEETDQLVGRECTIYFKQSDNKYTVQTNRDGAMREVDVISETGKAYQTGDRTIISSYKDG TLYIK >Mature_164_residues SHTIFLIIALVTTGIFLIQFVLSIFFGDIDADVDVDADISSVVSFKGLTHFGIGFGWYMYLVGNADIASYAIGILVGLFF VFAVWFLYKKAYQLQQVNRSEETDQLVGRECTIYFKQSDNKYTVQTNRDGAMREVDVISETGKAYQTGDRTIISSYKDGT LYIK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18585; Mature: 18454
Theoretical pI: Translated: 4.67; Mature: 4.67
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSHTIFLIIALVTTGIFLIQFVLSIFFGDIDADVDVDADISSVVSFKGLTHFGIGFGWYM CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHHH YLVGNADIASYAIGILVGLFFVFAVWFLYKKAYQLQQVNRSEETDQLVGRECTIYFKQSD HEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCEEEEEEEECC NKYTVQTNRDGAMREVDVISETGKAYQTGDRTIISSYKDGTLYIK CEEEEEECCCCCHHHHHHHHHCCCCEECCCCCEEECCCCCEEEEC >Mature Secondary Structure SHTIFLIIALVTTGIFLIQFVLSIFFGDIDADVDVDADISSVVSFKGLTHFGIGFGWYM CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHHH YLVGNADIASYAIGILVGLFFVFAVWFLYKKAYQLQQVNRSEETDQLVGRECTIYFKQSD HEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCEEEEEEEECC NKYTVQTNRDGAMREVDVISETGKAYQTGDRTIISSYKDGTLYIK CEEEEEECCCCCHHHHHHHHHCCCCEECCCCCEEECCCCCEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA