Definition Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome.
Accession NC_004663
Length 6,260,361

Click here to switch to the map view.

The map label for this gene is 29349629

Identifier: 29349629

GI number: 29349629

Start: 5558156

End: 5558653

Strand: Reverse

Name: 29349629

Synonym: BT_4221

Alternate gene names: NA

Gene position: 5558653-5558156 (Counterclockwise)

Preceding gene: 29349630

Following gene: 29349628

Centisome position: 88.79

GC content: 43.57

Gene sequence:

>498_bases
ATGAGTCATACCATCTTCCTAATCATCGCCCTCGTCACTACAGGAATTTTTCTTATTCAATTCGTATTATCCATTTTCTT
CGGAGACATAGATGCAGATGTGGACGTGGATGCTGATATCAGCAGCGTAGTATCTTTCAAAGGTCTCACCCACTTCGGGA
TCGGATTCGGATGGTATATGTACCTCGTAGGAAATGCCGATATAGCAAGTTATGCAATCGGAATTCTGGTAGGTCTGTTC
TTTGTCTTTGCCGTATGGTTCCTTTATAAGAAAGCCTATCAACTGCAGCAAGTGAACCGGTCTGAAGAGACCGATCAATT
GGTAGGACGGGAATGTACCATTTACTTCAAGCAAAGTGATAACAAATATACCGTACAGACAAACCGGGACGGCGCCATGC
GCGAAGTGGACGTGATCTCCGAAACCGGAAAAGCATATCAGACCGGAGACAGAACAATCATCAGCAGCTACAAAGACGGA
ACTTTATACATTAAATAA

Upstream 100 bases:

>100_bases
AAACATATCTACTTTTTATCACATTATCTTTGTTTATCTCTTATAAACCTGTATATTTGGAGTATTATAACTGATACATT
TATATTAATACAGAATTACT

Downstream 100 bases:

>100_bases
CTATTCAAATACACAATTTTATGACACAAGAAATGCTAATCATGGCTGCTATACTAGTGGCGGTCATTCTGCTTACTTTT
ATCGGTATCCTGTCGCGTTA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 165; Mature: 164

Protein sequence:

>165_residues
MSHTIFLIIALVTTGIFLIQFVLSIFFGDIDADVDVDADISSVVSFKGLTHFGIGFGWYMYLVGNADIASYAIGILVGLF
FVFAVWFLYKKAYQLQQVNRSEETDQLVGRECTIYFKQSDNKYTVQTNRDGAMREVDVISETGKAYQTGDRTIISSYKDG
TLYIK

Sequences:

>Translated_165_residues
MSHTIFLIIALVTTGIFLIQFVLSIFFGDIDADVDVDADISSVVSFKGLTHFGIGFGWYMYLVGNADIASYAIGILVGLF
FVFAVWFLYKKAYQLQQVNRSEETDQLVGRECTIYFKQSDNKYTVQTNRDGAMREVDVISETGKAYQTGDRTIISSYKDG
TLYIK
>Mature_164_residues
SHTIFLIIALVTTGIFLIQFVLSIFFGDIDADVDVDADISSVVSFKGLTHFGIGFGWYMYLVGNADIASYAIGILVGLFF
VFAVWFLYKKAYQLQQVNRSEETDQLVGRECTIYFKQSDNKYTVQTNRDGAMREVDVISETGKAYQTGDRTIISSYKDGT
LYIK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18585; Mature: 18454

Theoretical pI: Translated: 4.67; Mature: 4.67

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSHTIFLIIALVTTGIFLIQFVLSIFFGDIDADVDVDADISSVVSFKGLTHFGIGFGWYM
CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHHH
YLVGNADIASYAIGILVGLFFVFAVWFLYKKAYQLQQVNRSEETDQLVGRECTIYFKQSD
HEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCEEEEEEEECC
NKYTVQTNRDGAMREVDVISETGKAYQTGDRTIISSYKDGTLYIK
CEEEEEECCCCCHHHHHHHHHCCCCEECCCCCEEECCCCCEEEEC
>Mature Secondary Structure 
SHTIFLIIALVTTGIFLIQFVLSIFFGDIDADVDVDADISSVVSFKGLTHFGIGFGWYM
CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHHH
YLVGNADIASYAIGILVGLFFVFAVWFLYKKAYQLQQVNRSEETDQLVGRECTIYFKQSD
HEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCEEEEEEEECC
NKYTVQTNRDGAMREVDVISETGKAYQTGDRTIISSYKDGTLYIK
CEEEEEECCCCCHHHHHHHHHCCCCEECCCCCEEECCCCCEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA