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The map label for this gene is 29349582

Identifier: 29349582

GI number: 29349582

Start: 5495430

End: 5496590

Strand: Reverse

Name: 29349582

Synonym: BT_4174

Alternate gene names: NA

Gene position: 5496590-5495430 (Counterclockwise)

Preceding gene: 29349589

Following gene: 29349581

Centisome position: 87.8

GC content: 44.62

Gene sequence:

>1161_bases
ATGAAGAAATTACTCCTCTCATTTATTACAGCAACTCTCCTGAGTAGCATGTCTGCCGGTTCAGCCGGTGCGCAAGAGTT
GCCCGAACAAAAGGAGACTTTGGCAACCATCGTAAAAGTAAACGACTACTTTATGAAAAAGTATGCCGATTATACCCTAC
CCTCGTTTTTTGGCAGAGTTCGCCCCAGCAATATCTGGACTCGCGGAGTATATTATGAAGGGCTGATAGCTTTATATAGC
ATTTACCCGCGCGAAGATTATTATAGCTATACATACGATTGGGCGAATTTCCACAAATGGGGAATGCGTAATGGAAACAC
GACCCGCAATGCGGATGACCAATGCTGCGGACAAGTTTACATTGACCTATATAATATGTGTCCCTCCGACCCTAACATGA
TCCGGAATATAAAAGCCAGCATCGATATGGTCGTAAATACTCCGCAAGTAAATGATTGGGACTGGATTGACGCTATACAA
ATGGCAATGCCGATTTATGCCAAGTTTGGCAAGATGACCGGCGAACAAAAGTACTATGACAAAATGTGGGATCTGTATTC
CTATACCCGCAACACAGAAGGAGAAGCCGGTATGTACAATGCCAAAGAAGGATTATGGTGGCGCGATCAGGATTTTGATC
CTCCTTACAAAGAGCCGAACGGCAAGAACTGCTACTGGTCCAGAGGAAACGGTTGGGTATATGCAGCCCTTGTGCGTGTA
TTGGATGAAATCCCCGCTGACGAAACACATCGTCAGGACTATATCAATGACTTCCTGACCATGAGCAAAGCCTTGAAGCA
ATGTCAGCGTACAGACGGCTTCTGGAACGTAAGCCTCCACGATGAAAGCAATTTCGGAGGTAAAGAAACTTCGGGCACAG
CCTTGTTTGTATACGGAATGGCATGGGGAATCCGCAACGGATTACTCGACCGTAAAGAATATCTCCCTGTTGCACTGAAA
GCATGGAATGCAATGGTAAAAGAGGCAGTTCATCCGAATGGTTTCTTGGGCTATGTACAAGGAACAGGCAAAGAACCGAA
AGACGGGCAGCCGGTAACTTACAAAAGTGTTCCCGATTTTGAAAGATTATGGTGTAGGATGTTTCCTATTAGCAGGTACA
GAAGTTTACAAGTTAAAATAAGAGCATTATTTATCAGGTAA

Upstream 100 bases:

>100_bases
TTGTGGACAATATTCCATTGAAGAGGAAAAAAGATTCCCCTATCTTTGCCCGTGAAATCAATTATAGTAGCTAATTTTAT
TTATAAACAGTTTTTATACC

Downstream 100 bases:

>100_bases
ATGAAAAACAAGGTATTTCACTGCTTATGCTGGCTCACAGCCATCATATGCAGCTTGCAGATGCAGGCACAAAACAACAT
TGCTTCTCCAATGAAAGATG

Product: hypothetical protein

Products: NA

Alternate protein names: Glycosy Hydrolase Family Protein; Glycosyl Hydrolase; Family; Glycosyl Hydrolase RhiN; Gycosyl Hydrolase; Rhamnogalacturonides Degradation Protein RhiN

Number of amino acids: Translated: 386; Mature: 386

Protein sequence:

>386_residues
MKKLLLSFITATLLSSMSAGSAGAQELPEQKETLATIVKVNDYFMKKYADYTLPSFFGRVRPSNIWTRGVYYEGLIALYS
IYPREDYYSYTYDWANFHKWGMRNGNTTRNADDQCCGQVYIDLYNMCPSDPNMIRNIKASIDMVVNTPQVNDWDWIDAIQ
MAMPIYAKFGKMTGEQKYYDKMWDLYSYTRNTEGEAGMYNAKEGLWWRDQDFDPPYKEPNGKNCYWSRGNGWVYAALVRV
LDEIPADETHRQDYINDFLTMSKALKQCQRTDGFWNVSLHDESNFGGKETSGTALFVYGMAWGIRNGLLDRKEYLPVALK
AWNAMVKEAVHPNGFLGYVQGTGKEPKDGQPVTYKSVPDFERLWCRMFPISRYRSLQVKIRALFIR

Sequences:

>Translated_386_residues
MKKLLLSFITATLLSSMSAGSAGAQELPEQKETLATIVKVNDYFMKKYADYTLPSFFGRVRPSNIWTRGVYYEGLIALYS
IYPREDYYSYTYDWANFHKWGMRNGNTTRNADDQCCGQVYIDLYNMCPSDPNMIRNIKASIDMVVNTPQVNDWDWIDAIQ
MAMPIYAKFGKMTGEQKYYDKMWDLYSYTRNTEGEAGMYNAKEGLWWRDQDFDPPYKEPNGKNCYWSRGNGWVYAALVRV
LDEIPADETHRQDYINDFLTMSKALKQCQRTDGFWNVSLHDESNFGGKETSGTALFVYGMAWGIRNGLLDRKEYLPVALK
AWNAMVKEAVHPNGFLGYVQGTGKEPKDGQPVTYKSVPDFERLWCRMFPISRYRSLQVKIRALFIR
>Mature_386_residues
MKKLLLSFITATLLSSMSAGSAGAQELPEQKETLATIVKVNDYFMKKYADYTLPSFFGRVRPSNIWTRGVYYEGLIALYS
IYPREDYYSYTYDWANFHKWGMRNGNTTRNADDQCCGQVYIDLYNMCPSDPNMIRNIKASIDMVVNTPQVNDWDWIDAIQ
MAMPIYAKFGKMTGEQKYYDKMWDLYSYTRNTEGEAGMYNAKEGLWWRDQDFDPPYKEPNGKNCYWSRGNGWVYAALVRV
LDEIPADETHRQDYINDFLTMSKALKQCQRTDGFWNVSLHDESNFGGKETSGTALFVYGMAWGIRNGLLDRKEYLPVALK
AWNAMVKEAVHPNGFLGYVQGTGKEPKDGQPVTYKSVPDFERLWCRMFPISRYRSLQVKIRALFIR

Specific function: Unknown

COG id: COG4225

COG function: function code R; Predicted unsaturated glucuronyl hydrolase involved in regulation of bacterial surface properties, and related proteins

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 44805; Mature: 44805

Theoretical pI: Translated: 8.06; Mature: 8.06

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
5.7 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
4.1 %Met     (Mature Protein)
5.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKLLLSFITATLLSSMSAGSAGAQELPEQKETLATIVKVNDYFMKKYADYTLPSFFGRV
CHHHHHHHHHHHHHHHCCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCC
RPSNIWTRGVYYEGLIALYSIYPREDYYSYTYDWANFHKWGMRNGNTTRNADDQCCGQVY
CCCCEEECCHHHHHHHHHHHHCCCCCCCEEEECCHHHHHHCCCCCCCCCCCCHHHHHHHH
IDLYNMCPSDPNMIRNIKASIDMVVNTPQVNDWDWIDAIQMAMPIYAKFGKMTGEQKYYD
HHHHHCCCCCHHHHHHHHHCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHH
KMWDLYSYTRNTEGEAGMYNAKEGLWWRDQDFDPPYKEPNGKNCYWSRGNGWVYAALVRV
HHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCHHHHHHHH
LDEIPADETHRQDYINDFLTMSKALKQCQRTDGFWNVSLHDESNFGGKETSGTALFVYGM
HHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCCEEEEEHH
AWGIRNGLLDRKEYLPVALKAWNAMVKEAVHPNGFLGYVQGTGKEPKDGQPVTYKSVPDF
HHHHHHCCCCHHHHCHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCEEECCCCCH
ERLWCRMFPISRYRSLQVKIRALFIR
HHHHHHHCCHHHHHHHEEEEEEEEEC
>Mature Secondary Structure
MKKLLLSFITATLLSSMSAGSAGAQELPEQKETLATIVKVNDYFMKKYADYTLPSFFGRV
CHHHHHHHHHHHHHHHCCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCC
RPSNIWTRGVYYEGLIALYSIYPREDYYSYTYDWANFHKWGMRNGNTTRNADDQCCGQVY
CCCCEEECCHHHHHHHHHHHHCCCCCCCEEEECCHHHHHHCCCCCCCCCCCCHHHHHHHH
IDLYNMCPSDPNMIRNIKASIDMVVNTPQVNDWDWIDAIQMAMPIYAKFGKMTGEQKYYD
HHHHHCCCCCHHHHHHHHHCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHH
KMWDLYSYTRNTEGEAGMYNAKEGLWWRDQDFDPPYKEPNGKNCYWSRGNGWVYAALVRV
HHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCHHHHHHHH
LDEIPADETHRQDYINDFLTMSKALKQCQRTDGFWNVSLHDESNFGGKETSGTALFVYGM
HHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCCEEEEEHH
AWGIRNGLLDRKEYLPVALKAWNAMVKEAVHPNGFLGYVQGTGKEPKDGQPVTYKSVPDF
HHHHHHCCCCHHHHCHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCEEECCCCCH
ERLWCRMFPISRYRSLQVKIRALFIR
HHHHHHHCCHHHHHHHEEEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA