Definition Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome.
Accession NC_004663
Length 6,260,361

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The map label for this gene is 29349555

Identifier: 29349555

GI number: 29349555

Start: 5445658

End: 5446248

Strand: Reverse

Name: 29349555

Synonym: BT_4147

Alternate gene names: NA

Gene position: 5446248-5445658 (Counterclockwise)

Preceding gene: 29349556

Following gene: 29349554

Centisome position: 87.0

GC content: 48.56

Gene sequence:

>591_bases
ATGTTAAAACAACTACTGACCGTCGTACTGCTGGCAATCTGCCTCATTAACGTACAGGCGCAGCAACTGACTCCTCCCGC
CGGAACTTTCCGTCTGGGTATATCGAAAGGAACCGACAGTCATTGGCTGGCTCCTCAGGAAAAAGTGAAAGGAATCGCTT
TCCGGTGGAAAGCCCTGCCGGATACCCGCGGCTTTATTCTCGAAGTAGCGGTCACCTCCTTGCAGCAGGCCGATACCTTA
TTCTGGAGCTTCGGAAACTGTCAGCCGGACATGGATATAAACGTGTTCAGTGTAGAAGGGCAAGCCTTCACCTGTTATTA
TGGTGAAAGTATGAAACTCCGCACCTTGCAGGCGGTCACTCCCACTGACGATATCCGTTTGAGTAACGGCCGTCAGGACA
AGACTCCCCTCTTGCTTTATGAATCGGGGAAACGAACAGACCGTCCTGTCCTCGCAGGGCGCTGCCCGCTCGCAGCAAAC
AGTAAACTTTATTTCTGTTTCTACGAGCAAAATGCACGAGCAGATTATAATTATTTTATGTTGCCGGATCTTTTTGCAAA
GATTGATGAATCTAAACATAGTAAAAAATGA

Upstream 100 bases:

>100_bases
TATACGAGAAACTTTAATCTATCGGAAATAACATTGGACGTCAAAGACAAAGATGCTATTGTATTAAAGGAAAATGAACA
AAGTAATATCCACTTCGACT

Downstream 100 bases:

>100_bases
ATAAAACAGTAGTATCTCCATTCTCCTCCTTCGGGAAGGAGGAGATTTAAGATACTATTGATTATCATTTAGCTTAAATC
CATACAAAGATGAAAAGAAT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 196; Mature: 196

Protein sequence:

>196_residues
MLKQLLTVVLLAICLINVQAQQLTPPAGTFRLGISKGTDSHWLAPQEKVKGIAFRWKALPDTRGFILEVAVTSLQQADTL
FWSFGNCQPDMDINVFSVEGQAFTCYYGESMKLRTLQAVTPTDDIRLSNGRQDKTPLLLYESGKRTDRPVLAGRCPLAAN
SKLYFCFYEQNARADYNYFMLPDLFAKIDESKHSKK

Sequences:

>Translated_196_residues
MLKQLLTVVLLAICLINVQAQQLTPPAGTFRLGISKGTDSHWLAPQEKVKGIAFRWKALPDTRGFILEVAVTSLQQADTL
FWSFGNCQPDMDINVFSVEGQAFTCYYGESMKLRTLQAVTPTDDIRLSNGRQDKTPLLLYESGKRTDRPVLAGRCPLAAN
SKLYFCFYEQNARADYNYFMLPDLFAKIDESKHSKK
>Mature_196_residues
MLKQLLTVVLLAICLINVQAQQLTPPAGTFRLGISKGTDSHWLAPQEKVKGIAFRWKALPDTRGFILEVAVTSLQQADTL
FWSFGNCQPDMDINVFSVEGQAFTCYYGESMKLRTLQAVTPTDDIRLSNGRQDKTPLLLYESGKRTDRPVLAGRCPLAAN
SKLYFCFYEQNARADYNYFMLPDLFAKIDESKHSKK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22123; Mature: 22123

Theoretical pI: Translated: 8.70; Mature: 8.70

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.6 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
2.6 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLKQLLTVVLLAICLINVQAQQLTPPAGTFRLGISKGTDSHWLAPQEKVKGIAFRWKALP
CHHHHHHHHHHHHHHHCCHHHHCCCCCCEEEEEECCCCCCCCCCCHHHHCCEEEEEEECC
DTRGFILEVAVTSLQQADTLFWSFGNCQPDMDINVFSVEGQAFTCYYGESMKLRTLQAVT
CCCCEEEEEHHHHHHHHHEEEEECCCCCCCCCEEEEEECCCEEEEEECCCEEEEEEEEEC
PTDDIRLSNGRQDKTPLLLYESGKRTDRPVLAGRCPLAANSKLYFCFYEQNARADYNYFM
CCCCEEECCCCCCCCCEEEECCCCCCCCCEEECCCCCCCCCEEEEEEEECCCCCCCCEEE
LPDLFAKIDESKHSKK
CHHHHHHHCCCCCCCC
>Mature Secondary Structure
MLKQLLTVVLLAICLINVQAQQLTPPAGTFRLGISKGTDSHWLAPQEKVKGIAFRWKALP
CHHHHHHHHHHHHHHHCCHHHHCCCCCCEEEEEECCCCCCCCCCCHHHHCCEEEEEEECC
DTRGFILEVAVTSLQQADTLFWSFGNCQPDMDINVFSVEGQAFTCYYGESMKLRTLQAVT
CCCCEEEEEHHHHHHHHHEEEEECCCCCCCCCEEEEEECCCEEEEEECCCEEEEEEEEEC
PTDDIRLSNGRQDKTPLLLYESGKRTDRPVLAGRCPLAANSKLYFCFYEQNARADYNYFM
CCCCEEECCCCCCCCCEEEECCCCCCCCCEEECCCCCCCCCEEEEEEEECCCCCCCCEEE
LPDLFAKIDESKHSKK
CHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA