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The map label for this gene is 29349524

Identifier: 29349524

GI number: 29349524

Start: 5389689

End: 5391260

Strand: Reverse

Name: 29349524

Synonym: BT_4116

Alternate gene names: NA

Gene position: 5391260-5389689 (Counterclockwise)

Preceding gene: 29349532

Following gene: 29349523

Centisome position: 86.12

GC content: 43.7

Gene sequence:

>1572_bases
ATGAATAAAACTTTTTTAGGAGCTTTTCTTGCATCTGTCTTCATATCATTCACAGCCTGTTCGGAAGAAAATCTCGAACA
GGACACAAATCCTCCAATAGAACAGCCGGGAGATTCTACTGATCCGGATGATTCGGGAGAGGATCAGCTGCCGGAGTATC
CGACTCCCGACCGTTCGACAGTCGCAGCTTTTCCCGGTGCCGAAGGAGCCGGAAAACTAACTACCGGTGGAGCCGGAGGA
ACAGTATATACAGTAACTTCTCTCAAAGATGACGGTTCAGAAGGTACTCTCCGTTGGGCGATAGAGAAGTCGGGCAAAAG
GACGATTGTGTTCGCTGTTGGTGGAGTCATCCCTTTAACCAAACAGTTGCAAATAAAGAATGACGATATAACCATTGCAG
GTCAAACTGCTCCCCACCCCGGTATTTGCTTGAAAAATTACACTTTACGTGTCAACGCAAACAATGTCATTATCCGATTT
ATCCGTTCACGTATGGGGGATGAATGCAAGACGGAAGATGATTCGATGAATGGGTATCAAGATTCTTATCCCGGCAAAAG
GAATATTATTATCGACCATTGCTCCATGAGCTGGAGTACAGACGAATGTGCTTCCTTCTATGGAAATACCGACTTTACCA
TGCAATGGTGTATCATCAGCGAGAGTCTGACAAATTCTCTTCACAACAAAGGAGGACATGGATATGGCGGAATATGGGGA
GGAAGCCCTGCAACCTTCCACCATAATCTGCTGGCCCACCATAGCAACCGCACCCCTCGCCTCTGTGGAAGCCGTTATTC
TAACAGAGAAGATATGGAAAAAGCCGATTTATGCAATAATGTAATCTATAATTGGACTGGTGAAGGAGCCTATGCGGGAG
AGGGAGGTTCTTATAATATCATGAATAACTACTATAAGCCGGGACCTGTTAATGCTTCGGCAAAAGTACATTGCCGTATT
TTCACCGCCTACGTAGATGATGGTAAAAACCAACAGGCACAAGGGATATATGGAAAATTCTATGTAAACGGGAATTATTT
CGAAACACATGAGAAGTTATCTAATTCACAAAAGACAGAATTGGCCAATGCAAATGCAGATAATACCTCCTCAACCGCTT
TTTGCGTAAAAAACAACGAAGTTTCAACAAAAGATTTGCTTGTATCTTTGCGTTTTCCTATCTTAGATGATTATTCGTTC
GTTCAGTCTGCACAAGATGCCTATCAGTCTGTATTACTATACGCTGGTGCTTCCAATCTGCGTGACAAGATTGATAAACG
TATTGTAAAAGAAACCCAGGAAGGCACTTTCACATACACAGGCTCAAACGGAGGAACGAACGGACTGATCGATACACAAG
CTGATGTGGAAGGATGGAGTGAATACGCATCCACTACCACTACACAGCAGGATAGTGACAAAGACGGGATACCGGACGAA
TGGGAAACAGCCAACGGGCTGAATCCCAACGACGGCAGTGACGGAAACAAATATAACTTAAGCAAGGAATATACCAACCT
CGAAGTCTATCTGAATAGTTTGGTAAATTCCTTATACCCAACCAATAACTAA

Upstream 100 bases:

>100_bases
AACAAATATTGCACACCGACGTCTTTTCTTCCCTATACATTTGCAACCATATAATTAACACAATACGTGAGTACAACCCA
TATTTTAAAGAACTAATGCC

Downstream 100 bases:

>100_bases
GTAGCTATGAACAAAAAAATCCTGGTAGGGCTATGTGCCTTATTTATGCTCCCTTCTATCCAAGGGAATACAAATACTGA
CAATTCGTACAAAGAGAATG

Product: hypothetical protein

Products: NA

Alternate protein names: Pectinesterase; Pectate Lyase Protein; Polysaccharide Lyase Family; Ricin B Lectin; Pectate Lysase; PKD Domain Containing Protein; 50S Ribosomal Protein L; Pectate Lyase/Amb Allergen; Fibronectin Type III Domain-Containing Protein

Number of amino acids: Translated: 523; Mature: 523

Protein sequence:

>523_residues
MNKTFLGAFLASVFISFTACSEENLEQDTNPPIEQPGDSTDPDDSGEDQLPEYPTPDRSTVAAFPGAEGAGKLTTGGAGG
TVYTVTSLKDDGSEGTLRWAIEKSGKRTIVFAVGGVIPLTKQLQIKNDDITIAGQTAPHPGICLKNYTLRVNANNVIIRF
IRSRMGDECKTEDDSMNGYQDSYPGKRNIIIDHCSMSWSTDECASFYGNTDFTMQWCIISESLTNSLHNKGGHGYGGIWG
GSPATFHHNLLAHHSNRTPRLCGSRYSNREDMEKADLCNNVIYNWTGEGAYAGEGGSYNIMNNYYKPGPVNASAKVHCRI
FTAYVDDGKNQQAQGIYGKFYVNGNYFETHEKLSNSQKTELANANADNTSSTAFCVKNNEVSTKDLLVSLRFPILDDYSF
VQSAQDAYQSVLLYAGASNLRDKIDKRIVKETQEGTFTYTGSNGGTNGLIDTQADVEGWSEYASTTTTQQDSDKDGIPDE
WETANGLNPNDGSDGNKYNLSKEYTNLEVYLNSLVNSLYPTNN

Sequences:

>Translated_523_residues
MNKTFLGAFLASVFISFTACSEENLEQDTNPPIEQPGDSTDPDDSGEDQLPEYPTPDRSTVAAFPGAEGAGKLTTGGAGG
TVYTVTSLKDDGSEGTLRWAIEKSGKRTIVFAVGGVIPLTKQLQIKNDDITIAGQTAPHPGICLKNYTLRVNANNVIIRF
IRSRMGDECKTEDDSMNGYQDSYPGKRNIIIDHCSMSWSTDECASFYGNTDFTMQWCIISESLTNSLHNKGGHGYGGIWG
GSPATFHHNLLAHHSNRTPRLCGSRYSNREDMEKADLCNNVIYNWTGEGAYAGEGGSYNIMNNYYKPGPVNASAKVHCRI
FTAYVDDGKNQQAQGIYGKFYVNGNYFETHEKLSNSQKTELANANADNTSSTAFCVKNNEVSTKDLLVSLRFPILDDYSF
VQSAQDAYQSVLLYAGASNLRDKIDKRIVKETQEGTFTYTGSNGGTNGLIDTQADVEGWSEYASTTTTQQDSDKDGIPDE
WETANGLNPNDGSDGNKYNLSKEYTNLEVYLNSLVNSLYPTNN
>Mature_523_residues
MNKTFLGAFLASVFISFTACSEENLEQDTNPPIEQPGDSTDPDDSGEDQLPEYPTPDRSTVAAFPGAEGAGKLTTGGAGG
TVYTVTSLKDDGSEGTLRWAIEKSGKRTIVFAVGGVIPLTKQLQIKNDDITIAGQTAPHPGICLKNYTLRVNANNVIIRF
IRSRMGDECKTEDDSMNGYQDSYPGKRNIIIDHCSMSWSTDECASFYGNTDFTMQWCIISESLTNSLHNKGGHGYGGIWG
GSPATFHHNLLAHHSNRTPRLCGSRYSNREDMEKADLCNNVIYNWTGEGAYAGEGGSYNIMNNYYKPGPVNASAKVHCRI
FTAYVDDGKNQQAQGIYGKFYVNGNYFETHEKLSNSQKTELANANADNTSSTAFCVKNNEVSTKDLLVSLRFPILDDYSF
VQSAQDAYQSVLLYAGASNLRDKIDKRIVKETQEGTFTYTGSNGGTNGLIDTQADVEGWSEYASTTTTQQDSDKDGIPDE
WETANGLNPNDGSDGNKYNLSKEYTNLEVYLNSLVNSLYPTNN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 57265; Mature: 57265

Theoretical pI: Translated: 4.56; Mature: 4.56

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNKTFLGAFLASVFISFTACSEENLEQDTNPPIEQPGDSTDPDDSGEDQLPEYPTPDRST
CCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCE
VAAFPGAEGAGKLTTGGAGGTVYTVTSLKDDGSEGTLRWAIEKSGKRTIVFAVGGVIPLT
EEECCCCCCCCCEEECCCCCEEEEEEEECCCCCCCEEEEEEECCCCEEEEEEECCCCCCC
KQLQIKNDDITIAGQTAPHPGICLKNYTLRVNANNVIIRFIRSRMGDECKTEDDSMNGYQ
EEEEEECCCEEEEECCCCCCCEEEECEEEEEECCHHHHHHHHHHCCCCCCCCCCCCCCCC
DSYPGKRNIIIDHCSMSWSTDECASFYGNTDFTMQWCIISESLTNSLHNKGGHGYGGIWG
CCCCCCCCEEEEECCCCCCHHHHHHHHCCCCCEEEEEEECHHHHHHHHHCCCCCCCCCCC
GSPATFHHNLLAHHSNRTPRLCGSRYSNREDMEKADLCNNVIYNWTGEGAYAGEGGSYNI
CCCCHHHHHHHHHCCCCCCHHHCCCCCCHHHHHHHHHHCCCEEEECCCCCCCCCCCCCCC
MNNYYKPGPVNASAKVHCRIFTAYVDDGKNQQAQGIYGKFYVNGNYFETHEKLSNSQKTE
CCCCCCCCCCCCCCEEEEEEEEEEECCCCCCCCCCCEEEEEECCCEEEHHHHHCCCHHHH
LANANADNTSSTAFCVKNNEVSTKDLLVSLRFPILDDYSFVQSAQDAYQSVLLYAGASNL
HCCCCCCCCCCEEEEEECCCCCHHHEEEEEECCCCCCHHHHHHHHHHHHHEEHHCCCHHH
RDKIDKRIVKETQEGTFTYTGSNGGTNGLIDTQADVEGWSEYASTTTTQQDSDKDGIPDE
HHHHHHHHHHHCCCCEEEEECCCCCCCCEEECCHHHHHHHHHHHCCCCCCCCCCCCCCCC
WETANGLNPNDGSDGNKYNLSKEYTNLEVYLNSLVNSLYPTNN
CCCCCCCCCCCCCCCCEEECCHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MNKTFLGAFLASVFISFTACSEENLEQDTNPPIEQPGDSTDPDDSGEDQLPEYPTPDRST
CCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCE
VAAFPGAEGAGKLTTGGAGGTVYTVTSLKDDGSEGTLRWAIEKSGKRTIVFAVGGVIPLT
EEECCCCCCCCCEEECCCCCEEEEEEEECCCCCCCEEEEEEECCCCEEEEEEECCCCCCC
KQLQIKNDDITIAGQTAPHPGICLKNYTLRVNANNVIIRFIRSRMGDECKTEDDSMNGYQ
EEEEEECCCEEEEECCCCCCCEEEECEEEEEECCHHHHHHHHHHCCCCCCCCCCCCCCCC
DSYPGKRNIIIDHCSMSWSTDECASFYGNTDFTMQWCIISESLTNSLHNKGGHGYGGIWG
CCCCCCCCEEEEECCCCCCHHHHHHHHCCCCCEEEEEEECHHHHHHHHHCCCCCCCCCCC
GSPATFHHNLLAHHSNRTPRLCGSRYSNREDMEKADLCNNVIYNWTGEGAYAGEGGSYNI
CCCCHHHHHHHHHCCCCCCHHHCCCCCCHHHHHHHHHHCCCEEEECCCCCCCCCCCCCCC
MNNYYKPGPVNASAKVHCRIFTAYVDDGKNQQAQGIYGKFYVNGNYFETHEKLSNSQKTE
CCCCCCCCCCCCCCEEEEEEEEEEECCCCCCCCCCCEEEEEECCCEEEHHHHHCCCHHHH
LANANADNTSSTAFCVKNNEVSTKDLLVSLRFPILDDYSFVQSAQDAYQSVLLYAGASNL
HCCCCCCCCCCEEEEEECCCCCHHHEEEEEECCCCCCHHHHHHHHHHHHHEEHHCCCHHH
RDKIDKRIVKETQEGTFTYTGSNGGTNGLIDTQADVEGWSEYASTTTTQQDSDKDGIPDE
HHHHHHHHHHHCCCCEEEEECCCCCCCCEEECCHHHHHHHHHHHCCCCCCCCCCCCCCCC
WETANGLNPNDGSDGNKYNLSKEYTNLEVYLNSLVNSLYPTNN
CCCCCCCCCCCCCCCCEEECCHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA