| Definition | Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome. |
|---|---|
| Accession | NC_004663 |
| Length | 6,260,361 |
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The map label for this gene is 29349446
Identifier: 29349446
GI number: 29349446
Start: 5248793
End: 5250634
Strand: Reverse
Name: 29349446
Synonym: BT_4038
Alternate gene names: NA
Gene position: 5250634-5248793 (Counterclockwise)
Preceding gene: 29349447
Following gene: 29349445
Centisome position: 83.87
GC content: 44.41
Gene sequence:
>1842_bases ATGAAGACATTGAAAAAACTATCAATCATAGTGGCCGTAGGACTAAGCACGATATTCTTTTCGGGTTGCAGCGATTATCT GGATGTATCGGACGACCTGGCGGCAGAATTAAGCATGGAAGAAGTATTCAATAATACCGGTTATGCCCGTCGCTTCCACC GATATATATATTCCGGAATTCCGGATGTATCAAACATTATTATAACCAGTTCTTATGCAGCCTTGACGGGATTGGATAAT CCCTGGCCGGCAGTTTCCGACGAGTTAAAAAGTGCACAAAATAATGTCAAGACAATTCCGACAGTAGGTTACCATGCCGG ATCGGCGGATTTATCGCGCTGGAGTCTTTACAAACAAATCCGTCAGGCAAACGAATTTCTGGCATACTCGCATACGATCC CACAGCAAGGTGACGTTACGGATTACATTGACGAAGACGAATTGGCAAGATTGAAAAACGAAGCTCGTTTCCTACGTGCT TACTATCACTACTTGTTATTTGAATTGTATGGTCCTATCCCCATTATGACAGAAATATCGGAACCGTCCGCAAGTGATCT GGACTATTACCGGAACTCTGTCGACGAAGTAGTGCAATTCATCGATTCCGAACTCAATGAATGCTACAATGAACTGCCTG AAAAGGAAGTGAACGATGACGGGACTCCAAACGAGAACCGAAGCGCAGCACCTACCAAAGGGGCAGCATTGGCTATTCTG GCAAAACTCCACGTGTATGCCGCAAGCCCCTTACTTAACGGAGGATATTCGGAAGCAATCGCATTGAGGGATAATCAGGA CAAACAACTGTTTCCTGCGAAAGATGACAAAAAATGGCAAACTGCCTTAAACGCGTTGCAGCGCTTCATTGATTATGCAA AAACTCACTATCACCTTTATAAAGAAAAAGATAAAGATGGAGAGTTGAATGCAGAAGAATCTCTATACCAACTCTTTCAG GTAAGTTTGAACAACCCGGAAGCTATCTGGCAAACCAGCAAGAATTCATGGGGCGATGTAGGTGGAGAAGGAAGAGAACG CAGATGCACTCCACGTGCGATATATAGCGGATTCGGTTGTGTAGGTGTATTGCAGGAAGCCATTGACGATTTCTACATGA ATGACGGCAAGAGTATTCACGAGTCAGGACTTTATTCAGAAGAAGGCATTGGCGAAGACGGCATTCCTAATATGTATAAG AATCGCGAACCACGTTTTTATCAGGCCATAACTTACTCCGGCAAGACATGGCAAAAAACAACGAAACAGATTTATTTCTA TAAAGGCAGCGGAGACGATAACTCCAAAGCGGATATGAGCTACTCCGGCTATCTGCTTTACAAGGGAATGAACCGTGATC TTTTAAACCAAGGAAGTAATGCCAAATCAAAATACAGAGCAGGAATGTTGTTCCGTCTCGCCGACTTCTATTTATTATAT GCCGAAGCGTTGAACCATGTAAATCCTTCGGATGAACGTATCATTGCACATATCGACAGTGTCCGCTACCGAGCAGGTAT CCCTTTACTAAAGGACATCAAGCCTGAAATAAAAGGCAACCAAGCCTTACAGGAAGAAGCCATCCGCAAAGAACGCCGGA TCGAACTATTCGCCGAAGGACAACGCTATTTCGACGTCCGTCGCTGGATGTGTGCCGATGAAGAAGGATATAAGCAAGGC GGACCGGTACATGGTATGAATATGAATGCCGATAACCTGGAGGACTTTATGGAGCGTACCGCATTTGAAACCCGTATTTT TGAAAGACGCATGTACCTCTATCCTATCCCGTTAAACGAGATTCAGAAGTCGAGCAAACTTGTTCAGAATCCGGGTTGGT AG
Upstream 100 bases:
>100_bases ACTTGGAAACACCAACGGCGGCTTCTCATATCCACTGAGCCGGACTTTCACATTCGGTCTTGACTTTACTTTCTAATAAT ACATATAATACATTATATAT
Downstream 100 bases:
>100_bases CAGCCAAATGTCATAACACAGACACAATAGGTATCCCATCATAGATGCAGAAAAACATCACCTAAACGGTGCTGATGTAA AAAGAGTTTTCCATTCATTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 613; Mature: 613
Protein sequence:
>613_residues MKTLKKLSIIVAVGLSTIFFSGCSDYLDVSDDLAAELSMEEVFNNTGYARRFHRYIYSGIPDVSNIIITSSYAALTGLDN PWPAVSDELKSAQNNVKTIPTVGYHAGSADLSRWSLYKQIRQANEFLAYSHTIPQQGDVTDYIDEDELARLKNEARFLRA YYHYLLFELYGPIPIMTEISEPSASDLDYYRNSVDEVVQFIDSELNECYNELPEKEVNDDGTPNENRSAAPTKGAALAIL AKLHVYAASPLLNGGYSEAIALRDNQDKQLFPAKDDKKWQTALNALQRFIDYAKTHYHLYKEKDKDGELNAEESLYQLFQ VSLNNPEAIWQTSKNSWGDVGGEGRERRCTPRAIYSGFGCVGVLQEAIDDFYMNDGKSIHESGLYSEEGIGEDGIPNMYK NREPRFYQAITYSGKTWQKTTKQIYFYKGSGDDNSKADMSYSGYLLYKGMNRDLLNQGSNAKSKYRAGMLFRLADFYLLY AEALNHVNPSDERIIAHIDSVRYRAGIPLLKDIKPEIKGNQALQEEAIRKERRIELFAEGQRYFDVRRWMCADEEGYKQG GPVHGMNMNADNLEDFMERTAFETRIFERRMYLYPIPLNEIQKSSKLVQNPGW
Sequences:
>Translated_613_residues MKTLKKLSIIVAVGLSTIFFSGCSDYLDVSDDLAAELSMEEVFNNTGYARRFHRYIYSGIPDVSNIIITSSYAALTGLDN PWPAVSDELKSAQNNVKTIPTVGYHAGSADLSRWSLYKQIRQANEFLAYSHTIPQQGDVTDYIDEDELARLKNEARFLRA YYHYLLFELYGPIPIMTEISEPSASDLDYYRNSVDEVVQFIDSELNECYNELPEKEVNDDGTPNENRSAAPTKGAALAIL AKLHVYAASPLLNGGYSEAIALRDNQDKQLFPAKDDKKWQTALNALQRFIDYAKTHYHLYKEKDKDGELNAEESLYQLFQ VSLNNPEAIWQTSKNSWGDVGGEGRERRCTPRAIYSGFGCVGVLQEAIDDFYMNDGKSIHESGLYSEEGIGEDGIPNMYK NREPRFYQAITYSGKTWQKTTKQIYFYKGSGDDNSKADMSYSGYLLYKGMNRDLLNQGSNAKSKYRAGMLFRLADFYLLY AEALNHVNPSDERIIAHIDSVRYRAGIPLLKDIKPEIKGNQALQEEAIRKERRIELFAEGQRYFDVRRWMCADEEGYKQG GPVHGMNMNADNLEDFMERTAFETRIFERRMYLYPIPLNEIQKSSKLVQNPGW >Mature_613_residues MKTLKKLSIIVAVGLSTIFFSGCSDYLDVSDDLAAELSMEEVFNNTGYARRFHRYIYSGIPDVSNIIITSSYAALTGLDN PWPAVSDELKSAQNNVKTIPTVGYHAGSADLSRWSLYKQIRQANEFLAYSHTIPQQGDVTDYIDEDELARLKNEARFLRA YYHYLLFELYGPIPIMTEISEPSASDLDYYRNSVDEVVQFIDSELNECYNELPEKEVNDDGTPNENRSAAPTKGAALAIL AKLHVYAASPLLNGGYSEAIALRDNQDKQLFPAKDDKKWQTALNALQRFIDYAKTHYHLYKEKDKDGELNAEESLYQLFQ VSLNNPEAIWQTSKNSWGDVGGEGRERRCTPRAIYSGFGCVGVLQEAIDDFYMNDGKSIHESGLYSEEGIGEDGIPNMYK NREPRFYQAITYSGKTWQKTTKQIYFYKGSGDDNSKADMSYSGYLLYKGMNRDLLNQGSNAKSKYRAGMLFRLADFYLLY AEALNHVNPSDERIIAHIDSVRYRAGIPLLKDIKPEIKGNQALQEEAIRKERRIELFAEGQRYFDVRRWMCADEEGYKQG GPVHGMNMNADNLEDFMERTAFETRIFERRMYLYPIPLNEIQKSSKLVQNPGW
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 69988; Mature: 69988
Theoretical pI: Translated: 5.00; Mature: 5.00
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKTLKKLSIIVAVGLSTIFFSGCSDYLDVSDDLAAELSMEEVFNNTGYARRFHRYIYSGI CCCHHHHHHHHHHHHHHHHHHCCHHHHCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHCC PDVSNIIITSSYAALTGLDNPWPAVSDELKSAQNNVKTIPTVGYHAGSADLSRWSLYKQI CCHHHEEEECCHHHHCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHH RQANEFLAYSHTIPQQGDVTDYIDEDELARLKNEARFLRAYYHYLLFELYGPIPIMTEIS HHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCC EPSASDLDYYRNSVDEVVQFIDSELNECYNELPEKEVNDDGTPNENRSAAPTKGAALAIL CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHH AKLHVYAASPLLNGGYSEAIALRDNQDKQLFPAKDDKKWQTALNALQRFIDYAKTHYHLY HHHHHHHCCCCCCCCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH KEKDKDGELNAEESLYQLFQVSLNNPEAIWQTSKNSWGDVGGEGRERRCTPRAIYSGFGC HCCCCCCCCCHHHHHHHHHHHHCCCCHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHCCCH VGVLQEAIDDFYMNDGKSIHESGLYSEEGIGEDGIPNMYKNREPRFYQAITYSGKTWQKT HHHHHHHHHHHHHCCCCCHHHCCCCCCCCCCCCCCCCHHCCCCCCEEEEEECCCCHHHCC TKQIYFYKGSGDDNSKADMSYSGYLLYKGMNRDLLNQGSNAKSKYRAGMLFRLADFYLLY CCEEEEEECCCCCCCCCCCCCCCEEEEECCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHH AEALNHVNPSDERIIAHIDSVRYRAGIPLLKDIKPEIKGNQALQEEAIRKERRIELFAEG HHHHHCCCCCCHHHHHHHHHHHHHCCCCHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCC QRYFDVRRWMCADEEGYKQGGPVHGMNMNADNLEDFMERTAFETRIFERRMYLYPIPLNE HHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCEEEEECCHHH IQKSSKLVQNPGW HHHHHHHHCCCCC >Mature Secondary Structure MKTLKKLSIIVAVGLSTIFFSGCSDYLDVSDDLAAELSMEEVFNNTGYARRFHRYIYSGI CCCHHHHHHHHHHHHHHHHHHCCHHHHCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHCC PDVSNIIITSSYAALTGLDNPWPAVSDELKSAQNNVKTIPTVGYHAGSADLSRWSLYKQI CCHHHEEEECCHHHHCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHH RQANEFLAYSHTIPQQGDVTDYIDEDELARLKNEARFLRAYYHYLLFELYGPIPIMTEIS HHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCC EPSASDLDYYRNSVDEVVQFIDSELNECYNELPEKEVNDDGTPNENRSAAPTKGAALAIL CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHH AKLHVYAASPLLNGGYSEAIALRDNQDKQLFPAKDDKKWQTALNALQRFIDYAKTHYHLY HHHHHHHCCCCCCCCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH KEKDKDGELNAEESLYQLFQVSLNNPEAIWQTSKNSWGDVGGEGRERRCTPRAIYSGFGC HCCCCCCCCCHHHHHHHHHHHHCCCCHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHCCCH VGVLQEAIDDFYMNDGKSIHESGLYSEEGIGEDGIPNMYKNREPRFYQAITYSGKTWQKT HHHHHHHHHHHHHCCCCCHHHCCCCCCCCCCCCCCCCHHCCCCCCEEEEEECCCCHHHCC TKQIYFYKGSGDDNSKADMSYSGYLLYKGMNRDLLNQGSNAKSKYRAGMLFRLADFYLLY CCEEEEEECCCCCCCCCCCCCCCEEEEECCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHH AEALNHVNPSDERIIAHIDSVRYRAGIPLLKDIKPEIKGNQALQEEAIRKERRIELFAEG HHHHHCCCCCCHHHHHHHHHHHHHCCCCHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCC QRYFDVRRWMCADEEGYKQGGPVHGMNMNADNLEDFMERTAFETRIFERRMYLYPIPLNE HHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCEEEEECCHHH IQKSSKLVQNPGW HHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA