Definition Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome.
Accession NC_004663
Length 6,260,361

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The map label for this gene is 29349398

Identifier: 29349398

GI number: 29349398

Start: 5196633

End: 5198900

Strand: Reverse

Name: 29349398

Synonym: BT_3990

Alternate gene names: NA

Gene position: 5198900-5196633 (Counterclockwise)

Preceding gene: 29349399

Following gene: 29349397

Centisome position: 83.04

GC content: 46.6

Gene sequence:

>2268_bases
ATGAAAAGACTCTTATTAATAGCCTGTATACTTAATTGCACGCTATTGTCCCAAGCCAAAGACTGGACGCAGTACGTCAA
TCCGCTGATGGGTTCCCAATCTACTTTTGAGTTATCAACAGGCAATACCTATCCGGCTATTGCCCGTCCCTGGGGTATGA
ACTTCTGGACTCCACAGACAGGCAAAATGGGAGACGGATGGCAATATACCTATACCGCCAACAAAATCCGCGGGTTCAAA
CAGACACACCAGCCCAGTCCGTGGATCAATGATTATGGTCAGTTCTCGATAATGCCGATAGTGGGCCAACCGGTGTTTGA
CGAAGAGAAACGGGCAAGCTGGTTTGCACATAAAGGGGAAGTGGCAACTCCTTACTACTACAAAGTATACCTGGCAGAAC
ACGATATAGTCACCGAAATGACACCGACGGAACGTGCTGTGCTTTTCCGTTTCACATTCCCGGAGAATGATCATTCTTAT
GTGGTCGTAGATGCCTTCGACAAAGGTTCTTACATCAAAATTATTCCGGAAGAGAATAAGATAATCGGTTATACCACACG
CAACAGCGGTGGTGTTCCTGAAAACTTCAAGAACTACTTTATCATTGAGTTCGACAAGCCTTTCACCTATAAGGCCACGG
TAGAGAACGGAAATCTGCAAGAGAACGTAGCGGAACAGACAACCGACCATGCCGGAGCGATCATCGGATTCAAAACCCGC
AAAGGAGAGCAGGTGAACGCACGTATCGCCTCTTCTTTTATCAGCTTCGAGCAGGCTGCCGCTAATATGAACGAACTGGG
CAAAGATAATATAGAACAACTCGCCCAAAAAGGAAAAGATGCCTGGAATCAGGTGCTGGGCAAAATAGAAGTAGAAGGCG
GCAATCTGGATCAGTACCGTACATTCTACTCCTGCCTGTATCGTTCACTGCTTTTCCCGCGCAAGTTCTATGAGCTGGAT
GCGAACGGTCAGCCCATTCATTACAGTCCGTATAACGGACAGGTACTTCCGGGATATATGTTTACCGATACCGGCTTCTG
GGATACATTCCGCTGCCTCTTCCCGCTGTTGAATCTGATGTACCCGTCGGTTAATAAGGAGATGCAGGAAGGGTTGATCA
ATACATACCTTGAAAGCGGTTTCTTCCCCGAATGGGCAAGTCCGGGGCACAGAGGTTGCATGGTTGGAAATAACTCCGCA
TCAATCCTGGTAGACGCCTATATGAAAGGAGTAAAAGTCGATGATATCAAGACGTTGTATGAAGGACTGATTCACGGAAC
GGAGAATGTGCATCCGGAGGTTTCTTCTACCGGACGATTGGGATACGAGTATTATAATAAACTGGGATACGTACCCTACG
ATGTGAAAATCAACGAGAACGCCGCCCGTACTCTGGAGTATGCATACGATGACTGGTGTATCTATCGGTTGGCTAAAGAA
CTGAAACGTCCCAAGAAAGAAATCAGCCTGTTTGCCAAACGTGCCATGAATTACAAGAATCTTTTCGATAAAGAATCCAA
GCTGATGCGTGGTCGCAACGAAGACGGTACATTCCAGTCTCCTTTCTCACCACTGAAATGGGGAGATGCCTTTACGGAAG
GAAACAGCTGGCATTATACCTGGTCTGTCTTCCACGATCCGCAGGGACTTATTGACCTGATGGGCGGGAAAGAGATGTTT
GTTACCATGATGGATTCCGTATTTGCCGTACCGCCCATTTTTGATGACAGCTATTACGGACAAGTGATTCACGAAATTCG
TGAAATGACAGTGATGAATATGGGCAACTATGCACATGGTAATCAGCCGATCCAGCACATGATCTACCTCTATGACTATG
CGGGACAACCGTGGAAGGCTCAATATTGGTTACGTCAGGTAATGGACAGAATGTACACGCCCGGACCGGACGGTTACTGC
GGAGACGAAGACAACGGACAAACTTCTGCCTGGTATGTGTTCTCTGCGCTGGGTTTCTACCCTGTTTGCCCTGGAACGGA
CGAATATGTGATGGGAACTCCTCTGTTCAAAAAGGCTACTCTTCACTTCGAGAACGGCAATAGTCTTGTTATCGACGCGC
CCAATAACAGCACGGAAAATTTCTATATTGATTCCATGAGCTTCAATGGTGCTGATCATACCAAGAATTATCTGCGTCAC
GAAGATTTGTTCAAGGGAGGTACTATCAAAGTAGACATGAGTAATCGGCCGAATCTGAACAGAGGAACCAAAGAAGAGGA
TATGCCTTATTCTTTTTCCAAAGAATAG

Upstream 100 bases:

>100_bases
TAGCCAACATTCCGGATACCTGACATCACGCCGTCATTCTTCGCTATGCTCCGGATGACAGCGTGATGTTTCTCAATAAT
CATATAAACCATTACTTATC

Downstream 100 bases:

>100_bases
TAGTTAGTTCATCGATTAAATTCACGTTCCTATATTAGGCCCTTTTTCTTCCGGTTTTCTGACTTTCTCTCTGTTCTGAA
AGACTTTATCCGGATAATGG

Product: putative alpha-1,2-mannosidase

Products: NA

Alternate protein names: Alpha-1 2-Mannosidase Family Protein; Glycoside Hydrolase Family; Sugar Hydrolase; Secreted Protein; Glycoside Hydrolase Family Protein; Glycosyl Hydrolase Family; Outer Membrane Protein; Immunoreactive; Cell Wall Antigen; Glycosyl Hydrolase; Exported Alpha-1 2-Mannosidase; Antigen; Glycosyltransferase; Alpha-1 2-Mannosidase Protein; Mannosidase

Number of amino acids: Translated: 755; Mature: 755

Protein sequence:

>755_residues
MKRLLLIACILNCTLLSQAKDWTQYVNPLMGSQSTFELSTGNTYPAIARPWGMNFWTPQTGKMGDGWQYTYTANKIRGFK
QTHQPSPWINDYGQFSIMPIVGQPVFDEEKRASWFAHKGEVATPYYYKVYLAEHDIVTEMTPTERAVLFRFTFPENDHSY
VVVDAFDKGSYIKIIPEENKIIGYTTRNSGGVPENFKNYFIIEFDKPFTYKATVENGNLQENVAEQTTDHAGAIIGFKTR
KGEQVNARIASSFISFEQAAANMNELGKDNIEQLAQKGKDAWNQVLGKIEVEGGNLDQYRTFYSCLYRSLLFPRKFYELD
ANGQPIHYSPYNGQVLPGYMFTDTGFWDTFRCLFPLLNLMYPSVNKEMQEGLINTYLESGFFPEWASPGHRGCMVGNNSA
SILVDAYMKGVKVDDIKTLYEGLIHGTENVHPEVSSTGRLGYEYYNKLGYVPYDVKINENAARTLEYAYDDWCIYRLAKE
LKRPKKEISLFAKRAMNYKNLFDKESKLMRGRNEDGTFQSPFSPLKWGDAFTEGNSWHYTWSVFHDPQGLIDLMGGKEMF
VTMMDSVFAVPPIFDDSYYGQVIHEIREMTVMNMGNYAHGNQPIQHMIYLYDYAGQPWKAQYWLRQVMDRMYTPGPDGYC
GDEDNGQTSAWYVFSALGFYPVCPGTDEYVMGTPLFKKATLHFENGNSLVIDAPNNSTENFYIDSMSFNGADHTKNYLRH
EDLFKGGTIKVDMSNRPNLNRGTKEEDMPYSFSKE

Sequences:

>Translated_755_residues
MKRLLLIACILNCTLLSQAKDWTQYVNPLMGSQSTFELSTGNTYPAIARPWGMNFWTPQTGKMGDGWQYTYTANKIRGFK
QTHQPSPWINDYGQFSIMPIVGQPVFDEEKRASWFAHKGEVATPYYYKVYLAEHDIVTEMTPTERAVLFRFTFPENDHSY
VVVDAFDKGSYIKIIPEENKIIGYTTRNSGGVPENFKNYFIIEFDKPFTYKATVENGNLQENVAEQTTDHAGAIIGFKTR
KGEQVNARIASSFISFEQAAANMNELGKDNIEQLAQKGKDAWNQVLGKIEVEGGNLDQYRTFYSCLYRSLLFPRKFYELD
ANGQPIHYSPYNGQVLPGYMFTDTGFWDTFRCLFPLLNLMYPSVNKEMQEGLINTYLESGFFPEWASPGHRGCMVGNNSA
SILVDAYMKGVKVDDIKTLYEGLIHGTENVHPEVSSTGRLGYEYYNKLGYVPYDVKINENAARTLEYAYDDWCIYRLAKE
LKRPKKEISLFAKRAMNYKNLFDKESKLMRGRNEDGTFQSPFSPLKWGDAFTEGNSWHYTWSVFHDPQGLIDLMGGKEMF
VTMMDSVFAVPPIFDDSYYGQVIHEIREMTVMNMGNYAHGNQPIQHMIYLYDYAGQPWKAQYWLRQVMDRMYTPGPDGYC
GDEDNGQTSAWYVFSALGFYPVCPGTDEYVMGTPLFKKATLHFENGNSLVIDAPNNSTENFYIDSMSFNGADHTKNYLRH
EDLFKGGTIKVDMSNRPNLNRGTKEEDMPYSFSKE
>Mature_755_residues
MKRLLLIACILNCTLLSQAKDWTQYVNPLMGSQSTFELSTGNTYPAIARPWGMNFWTPQTGKMGDGWQYTYTANKIRGFK
QTHQPSPWINDYGQFSIMPIVGQPVFDEEKRASWFAHKGEVATPYYYKVYLAEHDIVTEMTPTERAVLFRFTFPENDHSY
VVVDAFDKGSYIKIIPEENKIIGYTTRNSGGVPENFKNYFIIEFDKPFTYKATVENGNLQENVAEQTTDHAGAIIGFKTR
KGEQVNARIASSFISFEQAAANMNELGKDNIEQLAQKGKDAWNQVLGKIEVEGGNLDQYRTFYSCLYRSLLFPRKFYELD
ANGQPIHYSPYNGQVLPGYMFTDTGFWDTFRCLFPLLNLMYPSVNKEMQEGLINTYLESGFFPEWASPGHRGCMVGNNSA
SILVDAYMKGVKVDDIKTLYEGLIHGTENVHPEVSSTGRLGYEYYNKLGYVPYDVKINENAARTLEYAYDDWCIYRLAKE
LKRPKKEISLFAKRAMNYKNLFDKESKLMRGRNEDGTFQSPFSPLKWGDAFTEGNSWHYTWSVFHDPQGLIDLMGGKEMF
VTMMDSVFAVPPIFDDSYYGQVIHEIREMTVMNMGNYAHGNQPIQHMIYLYDYAGQPWKAQYWLRQVMDRMYTPGPDGYC
GDEDNGQTSAWYVFSALGFYPVCPGTDEYVMGTPLFKKATLHFENGNSLVIDAPNNSTENFYIDSMSFNGADHTKNYLRH
EDLFKGGTIKVDMSNRPNLNRGTKEEDMPYSFSKE

Specific function: Unknown

COG id: COG3537

COG function: function code G; Putative alpha-1,2-mannosidase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 86633; Mature: 86633

Theoretical pI: Translated: 5.53; Mature: 5.53

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRLLLIACILNCTLLSQAKDWTQYVNPLMGSQSTFELSTGNTYPAIARPWGMNFWTPQT
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCCCCCC
GKMGDGWQYTYTANKIRGFKQTHQPSPWINDYGQFSIMPIVGQPVFDEEKRASWFAHKGE
CCCCCCEEEEEEHHHHHCHHHCCCCCCCCCCCCCEEEEEECCCCCCCCHHHHHHHHCCCC
VATPYYYKVYLAEHDIVTEMTPTERAVLFRFTFPENDHSYVVVDAFDKGSYIKIIPEENK
CCCCEEEEEEEECCCEEECCCCCCCEEEEEEECCCCCCCEEEEEEECCCCEEEEEECCCC
IIGYTTRNSGGVPENFKNYFIIEFDKPFTYKATVENGNLQENVAEQTTDHAGAIIGFKTR
EEEEEECCCCCCCCCCCCEEEEEECCCEEEEEEECCCCCHHHHHHHHHCCCCEEEEEECC
KGEQVNARIASSFISFEQAAANMNELGKDNIEQLAQKGKDAWNQVLGKIEVEGGNLDQYR
CCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCHHHHHHHHEEEEECCCCHHHHH
TFYSCLYRSLLFPRKFYELDANGQPIHYSPYNGQVLPGYMFTDTGFWDTFRCLFPLLNLM
HHHHHHHHHHHCCHHHEEECCCCCCEEECCCCCCEECCEEEECCCCHHHHHHHHHHHHHH
YPSVNKEMQEGLINTYLESGFFPEWASPGHRGCMVGNNSASILVDAYMKGVKVDDIKTLY
CCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCEEEECCCCCEEEEEHHHCCCCHHHHHHHH
EGLIHGTENVHPEVSSTGRLGYEYYNKLGYVPYDVKINENAARTLEYAYDDWCIYRLAKE
HHHHCCCCCCCCCCCCCCCCCHHHHHHCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHH
LKRPKKEISLFAKRAMNYKNLFDKESKLMRGRNEDGTFQSPFSPLKWGDAFTEGNSWHYT
HHCCHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEE
WSVFHDPQGLIDLMGGKEMFVTMMDSVFAVPPIFDDSYYGQVIHEIREMTVMNMGNYAHG
EEEEECCCHHHHHCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCC
NQPIQHMIYLYDYAGQPWKAQYWLRQVMDRMYTPGPDGYCGDEDNGQTSAWYVFSALGFY
CCCHHHEEEEEECCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHEEEEHHCCCE
PVCPGTDEYVMGTPLFKKATLHFENGNSLVIDAPNNSTENFYIDSMSFNGADHTKNYLRH
ECCCCCCCEEECCCCEEEEEEEEECCCEEEEECCCCCCCEEEEEEEECCCCHHHHHHHHH
EDLFKGGTIKVDMSNRPNLNRGTKEEDMPYSFSKE
HHHCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MKRLLLIACILNCTLLSQAKDWTQYVNPLMGSQSTFELSTGNTYPAIARPWGMNFWTPQT
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCCCCCC
GKMGDGWQYTYTANKIRGFKQTHQPSPWINDYGQFSIMPIVGQPVFDEEKRASWFAHKGE
CCCCCCEEEEEEHHHHHCHHHCCCCCCCCCCCCCEEEEEECCCCCCCCHHHHHHHHCCCC
VATPYYYKVYLAEHDIVTEMTPTERAVLFRFTFPENDHSYVVVDAFDKGSYIKIIPEENK
CCCCEEEEEEEECCCEEECCCCCCCEEEEEEECCCCCCCEEEEEEECCCCEEEEEECCCC
IIGYTTRNSGGVPENFKNYFIIEFDKPFTYKATVENGNLQENVAEQTTDHAGAIIGFKTR
EEEEEECCCCCCCCCCCCEEEEEECCCEEEEEEECCCCCHHHHHHHHHCCCCEEEEEECC
KGEQVNARIASSFISFEQAAANMNELGKDNIEQLAQKGKDAWNQVLGKIEVEGGNLDQYR
CCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCHHHHHHHHEEEEECCCCHHHHH
TFYSCLYRSLLFPRKFYELDANGQPIHYSPYNGQVLPGYMFTDTGFWDTFRCLFPLLNLM
HHHHHHHHHHHCCHHHEEECCCCCCEEECCCCCCEECCEEEECCCCHHHHHHHHHHHHHH
YPSVNKEMQEGLINTYLESGFFPEWASPGHRGCMVGNNSASILVDAYMKGVKVDDIKTLY
CCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCEEEECCCCCEEEEEHHHCCCCHHHHHHHH
EGLIHGTENVHPEVSSTGRLGYEYYNKLGYVPYDVKINENAARTLEYAYDDWCIYRLAKE
HHHHCCCCCCCCCCCCCCCCCHHHHHHCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHH
LKRPKKEISLFAKRAMNYKNLFDKESKLMRGRNEDGTFQSPFSPLKWGDAFTEGNSWHYT
HHCCHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEE
WSVFHDPQGLIDLMGGKEMFVTMMDSVFAVPPIFDDSYYGQVIHEIREMTVMNMGNYAHG
EEEEECCCHHHHHCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCC
NQPIQHMIYLYDYAGQPWKAQYWLRQVMDRMYTPGPDGYCGDEDNGQTSAWYVFSALGFY
CCCHHHEEEEEECCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHEEEEHHCCCE
PVCPGTDEYVMGTPLFKKATLHFENGNSLVIDAPNNSTENFYIDSMSFNGADHTKNYLRH
ECCCCCCCEEECCCCEEEEEEEEECCCEEEEECCCCCCCEEEEEEEECCCCHHHHHHHHH
EDLFKGGTIKVDMSNRPNLNRGTKEEDMPYSFSKE
HHHCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA