| Definition | Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome. |
|---|---|
| Accession | NC_004663 |
| Length | 6,260,361 |
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The map label for this gene is 29349398
Identifier: 29349398
GI number: 29349398
Start: 5196633
End: 5198900
Strand: Reverse
Name: 29349398
Synonym: BT_3990
Alternate gene names: NA
Gene position: 5198900-5196633 (Counterclockwise)
Preceding gene: 29349399
Following gene: 29349397
Centisome position: 83.04
GC content: 46.6
Gene sequence:
>2268_bases ATGAAAAGACTCTTATTAATAGCCTGTATACTTAATTGCACGCTATTGTCCCAAGCCAAAGACTGGACGCAGTACGTCAA TCCGCTGATGGGTTCCCAATCTACTTTTGAGTTATCAACAGGCAATACCTATCCGGCTATTGCCCGTCCCTGGGGTATGA ACTTCTGGACTCCACAGACAGGCAAAATGGGAGACGGATGGCAATATACCTATACCGCCAACAAAATCCGCGGGTTCAAA CAGACACACCAGCCCAGTCCGTGGATCAATGATTATGGTCAGTTCTCGATAATGCCGATAGTGGGCCAACCGGTGTTTGA CGAAGAGAAACGGGCAAGCTGGTTTGCACATAAAGGGGAAGTGGCAACTCCTTACTACTACAAAGTATACCTGGCAGAAC ACGATATAGTCACCGAAATGACACCGACGGAACGTGCTGTGCTTTTCCGTTTCACATTCCCGGAGAATGATCATTCTTAT GTGGTCGTAGATGCCTTCGACAAAGGTTCTTACATCAAAATTATTCCGGAAGAGAATAAGATAATCGGTTATACCACACG CAACAGCGGTGGTGTTCCTGAAAACTTCAAGAACTACTTTATCATTGAGTTCGACAAGCCTTTCACCTATAAGGCCACGG TAGAGAACGGAAATCTGCAAGAGAACGTAGCGGAACAGACAACCGACCATGCCGGAGCGATCATCGGATTCAAAACCCGC AAAGGAGAGCAGGTGAACGCACGTATCGCCTCTTCTTTTATCAGCTTCGAGCAGGCTGCCGCTAATATGAACGAACTGGG CAAAGATAATATAGAACAACTCGCCCAAAAAGGAAAAGATGCCTGGAATCAGGTGCTGGGCAAAATAGAAGTAGAAGGCG GCAATCTGGATCAGTACCGTACATTCTACTCCTGCCTGTATCGTTCACTGCTTTTCCCGCGCAAGTTCTATGAGCTGGAT GCGAACGGTCAGCCCATTCATTACAGTCCGTATAACGGACAGGTACTTCCGGGATATATGTTTACCGATACCGGCTTCTG GGATACATTCCGCTGCCTCTTCCCGCTGTTGAATCTGATGTACCCGTCGGTTAATAAGGAGATGCAGGAAGGGTTGATCA ATACATACCTTGAAAGCGGTTTCTTCCCCGAATGGGCAAGTCCGGGGCACAGAGGTTGCATGGTTGGAAATAACTCCGCA TCAATCCTGGTAGACGCCTATATGAAAGGAGTAAAAGTCGATGATATCAAGACGTTGTATGAAGGACTGATTCACGGAAC GGAGAATGTGCATCCGGAGGTTTCTTCTACCGGACGATTGGGATACGAGTATTATAATAAACTGGGATACGTACCCTACG ATGTGAAAATCAACGAGAACGCCGCCCGTACTCTGGAGTATGCATACGATGACTGGTGTATCTATCGGTTGGCTAAAGAA CTGAAACGTCCCAAGAAAGAAATCAGCCTGTTTGCCAAACGTGCCATGAATTACAAGAATCTTTTCGATAAAGAATCCAA GCTGATGCGTGGTCGCAACGAAGACGGTACATTCCAGTCTCCTTTCTCACCACTGAAATGGGGAGATGCCTTTACGGAAG GAAACAGCTGGCATTATACCTGGTCTGTCTTCCACGATCCGCAGGGACTTATTGACCTGATGGGCGGGAAAGAGATGTTT GTTACCATGATGGATTCCGTATTTGCCGTACCGCCCATTTTTGATGACAGCTATTACGGACAAGTGATTCACGAAATTCG TGAAATGACAGTGATGAATATGGGCAACTATGCACATGGTAATCAGCCGATCCAGCACATGATCTACCTCTATGACTATG CGGGACAACCGTGGAAGGCTCAATATTGGTTACGTCAGGTAATGGACAGAATGTACACGCCCGGACCGGACGGTTACTGC GGAGACGAAGACAACGGACAAACTTCTGCCTGGTATGTGTTCTCTGCGCTGGGTTTCTACCCTGTTTGCCCTGGAACGGA CGAATATGTGATGGGAACTCCTCTGTTCAAAAAGGCTACTCTTCACTTCGAGAACGGCAATAGTCTTGTTATCGACGCGC CCAATAACAGCACGGAAAATTTCTATATTGATTCCATGAGCTTCAATGGTGCTGATCATACCAAGAATTATCTGCGTCAC GAAGATTTGTTCAAGGGAGGTACTATCAAAGTAGACATGAGTAATCGGCCGAATCTGAACAGAGGAACCAAAGAAGAGGA TATGCCTTATTCTTTTTCCAAAGAATAG
Upstream 100 bases:
>100_bases TAGCCAACATTCCGGATACCTGACATCACGCCGTCATTCTTCGCTATGCTCCGGATGACAGCGTGATGTTTCTCAATAAT CATATAAACCATTACTTATC
Downstream 100 bases:
>100_bases TAGTTAGTTCATCGATTAAATTCACGTTCCTATATTAGGCCCTTTTTCTTCCGGTTTTCTGACTTTCTCTCTGTTCTGAA AGACTTTATCCGGATAATGG
Product: putative alpha-1,2-mannosidase
Products: NA
Alternate protein names: Alpha-1 2-Mannosidase Family Protein; Glycoside Hydrolase Family; Sugar Hydrolase; Secreted Protein; Glycoside Hydrolase Family Protein; Glycosyl Hydrolase Family; Outer Membrane Protein; Immunoreactive; Cell Wall Antigen; Glycosyl Hydrolase; Exported Alpha-1 2-Mannosidase; Antigen; Glycosyltransferase; Alpha-1 2-Mannosidase Protein; Mannosidase
Number of amino acids: Translated: 755; Mature: 755
Protein sequence:
>755_residues MKRLLLIACILNCTLLSQAKDWTQYVNPLMGSQSTFELSTGNTYPAIARPWGMNFWTPQTGKMGDGWQYTYTANKIRGFK QTHQPSPWINDYGQFSIMPIVGQPVFDEEKRASWFAHKGEVATPYYYKVYLAEHDIVTEMTPTERAVLFRFTFPENDHSY VVVDAFDKGSYIKIIPEENKIIGYTTRNSGGVPENFKNYFIIEFDKPFTYKATVENGNLQENVAEQTTDHAGAIIGFKTR KGEQVNARIASSFISFEQAAANMNELGKDNIEQLAQKGKDAWNQVLGKIEVEGGNLDQYRTFYSCLYRSLLFPRKFYELD ANGQPIHYSPYNGQVLPGYMFTDTGFWDTFRCLFPLLNLMYPSVNKEMQEGLINTYLESGFFPEWASPGHRGCMVGNNSA SILVDAYMKGVKVDDIKTLYEGLIHGTENVHPEVSSTGRLGYEYYNKLGYVPYDVKINENAARTLEYAYDDWCIYRLAKE LKRPKKEISLFAKRAMNYKNLFDKESKLMRGRNEDGTFQSPFSPLKWGDAFTEGNSWHYTWSVFHDPQGLIDLMGGKEMF VTMMDSVFAVPPIFDDSYYGQVIHEIREMTVMNMGNYAHGNQPIQHMIYLYDYAGQPWKAQYWLRQVMDRMYTPGPDGYC GDEDNGQTSAWYVFSALGFYPVCPGTDEYVMGTPLFKKATLHFENGNSLVIDAPNNSTENFYIDSMSFNGADHTKNYLRH EDLFKGGTIKVDMSNRPNLNRGTKEEDMPYSFSKE
Sequences:
>Translated_755_residues MKRLLLIACILNCTLLSQAKDWTQYVNPLMGSQSTFELSTGNTYPAIARPWGMNFWTPQTGKMGDGWQYTYTANKIRGFK QTHQPSPWINDYGQFSIMPIVGQPVFDEEKRASWFAHKGEVATPYYYKVYLAEHDIVTEMTPTERAVLFRFTFPENDHSY VVVDAFDKGSYIKIIPEENKIIGYTTRNSGGVPENFKNYFIIEFDKPFTYKATVENGNLQENVAEQTTDHAGAIIGFKTR KGEQVNARIASSFISFEQAAANMNELGKDNIEQLAQKGKDAWNQVLGKIEVEGGNLDQYRTFYSCLYRSLLFPRKFYELD ANGQPIHYSPYNGQVLPGYMFTDTGFWDTFRCLFPLLNLMYPSVNKEMQEGLINTYLESGFFPEWASPGHRGCMVGNNSA SILVDAYMKGVKVDDIKTLYEGLIHGTENVHPEVSSTGRLGYEYYNKLGYVPYDVKINENAARTLEYAYDDWCIYRLAKE LKRPKKEISLFAKRAMNYKNLFDKESKLMRGRNEDGTFQSPFSPLKWGDAFTEGNSWHYTWSVFHDPQGLIDLMGGKEMF VTMMDSVFAVPPIFDDSYYGQVIHEIREMTVMNMGNYAHGNQPIQHMIYLYDYAGQPWKAQYWLRQVMDRMYTPGPDGYC GDEDNGQTSAWYVFSALGFYPVCPGTDEYVMGTPLFKKATLHFENGNSLVIDAPNNSTENFYIDSMSFNGADHTKNYLRH EDLFKGGTIKVDMSNRPNLNRGTKEEDMPYSFSKE >Mature_755_residues MKRLLLIACILNCTLLSQAKDWTQYVNPLMGSQSTFELSTGNTYPAIARPWGMNFWTPQTGKMGDGWQYTYTANKIRGFK QTHQPSPWINDYGQFSIMPIVGQPVFDEEKRASWFAHKGEVATPYYYKVYLAEHDIVTEMTPTERAVLFRFTFPENDHSY VVVDAFDKGSYIKIIPEENKIIGYTTRNSGGVPENFKNYFIIEFDKPFTYKATVENGNLQENVAEQTTDHAGAIIGFKTR KGEQVNARIASSFISFEQAAANMNELGKDNIEQLAQKGKDAWNQVLGKIEVEGGNLDQYRTFYSCLYRSLLFPRKFYELD ANGQPIHYSPYNGQVLPGYMFTDTGFWDTFRCLFPLLNLMYPSVNKEMQEGLINTYLESGFFPEWASPGHRGCMVGNNSA SILVDAYMKGVKVDDIKTLYEGLIHGTENVHPEVSSTGRLGYEYYNKLGYVPYDVKINENAARTLEYAYDDWCIYRLAKE LKRPKKEISLFAKRAMNYKNLFDKESKLMRGRNEDGTFQSPFSPLKWGDAFTEGNSWHYTWSVFHDPQGLIDLMGGKEMF VTMMDSVFAVPPIFDDSYYGQVIHEIREMTVMNMGNYAHGNQPIQHMIYLYDYAGQPWKAQYWLRQVMDRMYTPGPDGYC GDEDNGQTSAWYVFSALGFYPVCPGTDEYVMGTPLFKKATLHFENGNSLVIDAPNNSTENFYIDSMSFNGADHTKNYLRH EDLFKGGTIKVDMSNRPNLNRGTKEEDMPYSFSKE
Specific function: Unknown
COG id: COG3537
COG function: function code G; Putative alpha-1,2-mannosidase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 86633; Mature: 86633
Theoretical pI: Translated: 5.53; Mature: 5.53
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKRLLLIACILNCTLLSQAKDWTQYVNPLMGSQSTFELSTGNTYPAIARPWGMNFWTPQT CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCCCCCC GKMGDGWQYTYTANKIRGFKQTHQPSPWINDYGQFSIMPIVGQPVFDEEKRASWFAHKGE CCCCCCEEEEEEHHHHHCHHHCCCCCCCCCCCCCEEEEEECCCCCCCCHHHHHHHHCCCC VATPYYYKVYLAEHDIVTEMTPTERAVLFRFTFPENDHSYVVVDAFDKGSYIKIIPEENK CCCCEEEEEEEECCCEEECCCCCCCEEEEEEECCCCCCCEEEEEEECCCCEEEEEECCCC IIGYTTRNSGGVPENFKNYFIIEFDKPFTYKATVENGNLQENVAEQTTDHAGAIIGFKTR EEEEEECCCCCCCCCCCCEEEEEECCCEEEEEEECCCCCHHHHHHHHHCCCCEEEEEECC KGEQVNARIASSFISFEQAAANMNELGKDNIEQLAQKGKDAWNQVLGKIEVEGGNLDQYR CCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCHHHHHHHHEEEEECCCCHHHHH TFYSCLYRSLLFPRKFYELDANGQPIHYSPYNGQVLPGYMFTDTGFWDTFRCLFPLLNLM HHHHHHHHHHHCCHHHEEECCCCCCEEECCCCCCEECCEEEECCCCHHHHHHHHHHHHHH YPSVNKEMQEGLINTYLESGFFPEWASPGHRGCMVGNNSASILVDAYMKGVKVDDIKTLY CCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCEEEECCCCCEEEEEHHHCCCCHHHHHHHH EGLIHGTENVHPEVSSTGRLGYEYYNKLGYVPYDVKINENAARTLEYAYDDWCIYRLAKE HHHHCCCCCCCCCCCCCCCCCHHHHHHCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHH LKRPKKEISLFAKRAMNYKNLFDKESKLMRGRNEDGTFQSPFSPLKWGDAFTEGNSWHYT HHCCHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEE WSVFHDPQGLIDLMGGKEMFVTMMDSVFAVPPIFDDSYYGQVIHEIREMTVMNMGNYAHG EEEEECCCHHHHHCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCC NQPIQHMIYLYDYAGQPWKAQYWLRQVMDRMYTPGPDGYCGDEDNGQTSAWYVFSALGFY CCCHHHEEEEEECCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHEEEEHHCCCE PVCPGTDEYVMGTPLFKKATLHFENGNSLVIDAPNNSTENFYIDSMSFNGADHTKNYLRH ECCCCCCCEEECCCCEEEEEEEEECCCEEEEECCCCCCCEEEEEEEECCCCHHHHHHHHH EDLFKGGTIKVDMSNRPNLNRGTKEEDMPYSFSKE HHHCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MKRLLLIACILNCTLLSQAKDWTQYVNPLMGSQSTFELSTGNTYPAIARPWGMNFWTPQT CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCCCCCC GKMGDGWQYTYTANKIRGFKQTHQPSPWINDYGQFSIMPIVGQPVFDEEKRASWFAHKGE CCCCCCEEEEEEHHHHHCHHHCCCCCCCCCCCCCEEEEEECCCCCCCCHHHHHHHHCCCC VATPYYYKVYLAEHDIVTEMTPTERAVLFRFTFPENDHSYVVVDAFDKGSYIKIIPEENK CCCCEEEEEEEECCCEEECCCCCCCEEEEEEECCCCCCCEEEEEEECCCCEEEEEECCCC IIGYTTRNSGGVPENFKNYFIIEFDKPFTYKATVENGNLQENVAEQTTDHAGAIIGFKTR EEEEEECCCCCCCCCCCCEEEEEECCCEEEEEEECCCCCHHHHHHHHHCCCCEEEEEECC KGEQVNARIASSFISFEQAAANMNELGKDNIEQLAQKGKDAWNQVLGKIEVEGGNLDQYR CCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCHHHHHHHHEEEEECCCCHHHHH TFYSCLYRSLLFPRKFYELDANGQPIHYSPYNGQVLPGYMFTDTGFWDTFRCLFPLLNLM HHHHHHHHHHHCCHHHEEECCCCCCEEECCCCCCEECCEEEECCCCHHHHHHHHHHHHHH YPSVNKEMQEGLINTYLESGFFPEWASPGHRGCMVGNNSASILVDAYMKGVKVDDIKTLY CCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCEEEECCCCCEEEEEHHHCCCCHHHHHHHH EGLIHGTENVHPEVSSTGRLGYEYYNKLGYVPYDVKINENAARTLEYAYDDWCIYRLAKE HHHHCCCCCCCCCCCCCCCCCHHHHHHCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHH LKRPKKEISLFAKRAMNYKNLFDKESKLMRGRNEDGTFQSPFSPLKWGDAFTEGNSWHYT HHCCHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEE WSVFHDPQGLIDLMGGKEMFVTMMDSVFAVPPIFDDSYYGQVIHEIREMTVMNMGNYAHG EEEEECCCHHHHHCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCC NQPIQHMIYLYDYAGQPWKAQYWLRQVMDRMYTPGPDGYCGDEDNGQTSAWYVFSALGFY CCCHHHEEEEEECCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHEEEEHHCCCE PVCPGTDEYVMGTPLFKKATLHFENGNSLVIDAPNNSTENFYIDSMSFNGADHTKNYLRH ECCCCCCCEEECCCCEEEEEEEEECCCEEEEECCCCCCCEEEEEEEECCCCHHHHHHHHH EDLFKGGTIKVDMSNRPNLNRGTKEEDMPYSFSKE HHHCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA