| Definition | Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome. |
|---|---|
| Accession | NC_004663 |
| Length | 6,260,361 |
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The map label for this gene is 29349389
Identifier: 29349389
GI number: 29349389
Start: 5183203
End: 5183889
Strand: Reverse
Name: 29349389
Synonym: BT_3981
Alternate gene names: NA
Gene position: 5183889-5183203 (Counterclockwise)
Preceding gene: 29349397
Following gene: 29349388
Centisome position: 82.8
GC content: 37.99
Gene sequence:
>687_bases ATGAAAACAGTATTTAATATTGTATTAGTACTCTGTGCTGCTGCATTAATCTACATTTGCTATAGCAGTATTATGGGTCC TATCAATTTTGAAAAAGCGAAAAAGGAAAGAGAGCAGGCTGTCATTGCCCGTTTGATCGACATCCGTAAAGCACAACAGG AATACCGTTCGCTTCATCACGGAATGTACACAGAACATTTTGACACACTGATTGATTTCGTTAAAAATCAAAAATTACCT TTCGTTATGAAAGTTGGTCAGCTGACAGACGACCAATTGGAAAGCGGCTTGACTGAGAAGAAAGCAATGGCAATCATCAA CAAAGCTAAAAAAACAGGCAAGTATGATGAAGTTAAGAAAAACGGACTTGAAAACTTTAAGCGTGACACCATGTGGGTAG CTGTAATGGACACCATCTATCCAAAAGGTTTCAATGCAGATTCAATGAAGTACATTCCTTATGGCAACGGTGCTATCTTT GAAATGAATGTTAAAAACGACACAGCTAAATCAGGTGCTCCTGTATACTTGTTTGAAGTGAAAGCTCCATATGAAACTTA CTTGGGCGGACTTGACAGACAAGAAATTATCAATTTGAAAGACCTTAATGAAAAACTGGGCAGATACTCAGGTTTGATGG TAGGTTCTATTGACAATCCTAACAATGGTGCTGGTAACTGGGAATAA
Upstream 100 bases:
>100_bases ATCATTTTTGTACGAGAAAAAAGTTCCCGGAACTATCGTATTTAAATTTATTTATTCTATTTTTGCGATGCGAATATAAC AACTAAAAACATAATTTATC
Downstream 100 bases:
>100_bases TGATTGATTTTACAAAATCAAAACAATATACTTTATCCATCCGTCTTAGTACGGATGGATTTTCTTTTTCTATCTACAAT CCGATTAACGACAATTCGCA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 228; Mature: 228
Protein sequence:
>228_residues MKTVFNIVLVLCAAALIYICYSSIMGPINFEKAKKEREQAVIARLIDIRKAQQEYRSLHHGMYTEHFDTLIDFVKNQKLP FVMKVGQLTDDQLESGLTEKKAMAIINKAKKTGKYDEVKKNGLENFKRDTMWVAVMDTIYPKGFNADSMKYIPYGNGAIF EMNVKNDTAKSGAPVYLFEVKAPYETYLGGLDRQEIINLKDLNEKLGRYSGLMVGSIDNPNNGAGNWE
Sequences:
>Translated_228_residues MKTVFNIVLVLCAAALIYICYSSIMGPINFEKAKKEREQAVIARLIDIRKAQQEYRSLHHGMYTEHFDTLIDFVKNQKLP FVMKVGQLTDDQLESGLTEKKAMAIINKAKKTGKYDEVKKNGLENFKRDTMWVAVMDTIYPKGFNADSMKYIPYGNGAIF EMNVKNDTAKSGAPVYLFEVKAPYETYLGGLDRQEIINLKDLNEKLGRYSGLMVGSIDNPNNGAGNWE >Mature_228_residues MKTVFNIVLVLCAAALIYICYSSIMGPINFEKAKKEREQAVIARLIDIRKAQQEYRSLHHGMYTEHFDTLIDFVKNQKLP FVMKVGQLTDDQLESGLTEKKAMAIINKAKKTGKYDEVKKNGLENFKRDTMWVAVMDTIYPKGFNADSMKYIPYGNGAIF EMNVKNDTAKSGAPVYLFEVKAPYETYLGGLDRQEIINLKDLNEKLGRYSGLMVGSIDNPNNGAGNWE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25842; Mature: 25842
Theoretical pI: Translated: 8.87; Mature: 8.87
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 4.4 %Met (Translated Protein) 5.3 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 4.4 %Met (Mature Protein) 5.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKTVFNIVLVLCAAALIYICYSSIMGPINFEKAKKEREQAVIARLIDIRKAQQEYRSLHH CHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC GMYTEHFDTLIDFVKNQKLPFVMKVGQLTDDQLESGLTEKKAMAIINKAKKTGKYDEVKK CHHHHHHHHHHHHHHCCCCCCEEECCCCCHHHHHCCCHHHHHHHHHHHHHHCCCHHHHHH NGLENFKRDTMWVAVMDTIYPKGFNADSMKYIPYGNGAIFEMNVKNDTAKSGAPVYLFEV HHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCEEEEEECCCCCCCCCCCEEEEEE KAPYETYLGGLDRQEIINLKDLNEKLGRYSGLMVGSIDNPNNGAGNWE CCCHHHHHCCCCHHHHHCHHHHHHHHHHHHCEEEECCCCCCCCCCCCC >Mature Secondary Structure MKTVFNIVLVLCAAALIYICYSSIMGPINFEKAKKEREQAVIARLIDIRKAQQEYRSLHH CHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC GMYTEHFDTLIDFVKNQKLPFVMKVGQLTDDQLESGLTEKKAMAIINKAKKTGKYDEVKK CHHHHHHHHHHHHHHCCCCCCEEECCCCCHHHHHCCCHHHHHHHHHHHHHHCCCHHHHHH NGLENFKRDTMWVAVMDTIYPKGFNADSMKYIPYGNGAIFEMNVKNDTAKSGAPVYLFEV HHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCEEEEEECCCCCCCCCCCEEEEEE KAPYETYLGGLDRQEIINLKDLNEKLGRYSGLMVGSIDNPNNGAGNWE CCCHHHHHCCCCHHHHHCHHHHHHHHHHHHCEEEECCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA