Definition Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome.
Accession NC_004663
Length 6,260,361

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The map label for this gene is 29346710

Identifier: 29346710

GI number: 29346710

Start: 1621178

End: 1622020

Strand: Reverse

Name: 29346710

Synonym: BT_1300

Alternate gene names: NA

Gene position: 1622020-1621178 (Counterclockwise)

Preceding gene: 29346711

Following gene: 29346709

Centisome position: 25.91

GC content: 41.04

Gene sequence:

>843_bases
ATGAGTAGTAAATACTATTACTTGGTAGCCGGTTTGCCGGAACTCACTCTGGAGGACAGTAAACTGAGCTATACAGTAGC
CGATTTTAAAACCGAAATCTACAGTGGATTGTCTGCTTCAGACCAGAAGTTGATTGACCTGTTCTATCTGAAGTTTGATA
ATGCCAACGTGTTGAAACTCCTCAAAGACAAAGAGGCGGAAATAGACAGACGGGGAAACTATTCTGCTGCGGAACTCACC
GAGTATATTTCTATTCTGAAAGAAGGCGGTGAGATCAGTCCTAAAGAATTCCCTTCCTATTTATCTACTTTTATTTCCGA
CTATCTGAATACTCCGGCTGAAAGCATAGTGTTGCAGGAAGACCATCTGGCTGCTCTGTATTATGAACATGCTATGAAAT
GCGGAAATAAGTTCGTCTCTTCCTGGTTTGAATTCAATCTGAACATTAATAATATTCTTGTTGCATTTACAGCCCGTAAA
TTCAAATGGGATATTGCTTCCCATATTGTAGGAAATACGGAAGTGTGCGAAGCTTTGCGTACATCCAGTGCCCGCGATTT
TGGTTTGTCCGGTGAAGTGGATGTTTTTGAATCGTTGGTGAAGACCAGTGAGATTACGGAACTGGTGGAACGTGAAAAGA
AATTGGATGCTCTGCGGTGGAACTGGATGGAAGATGCTATCTTCTTCGATTATTTCACTGTAGAACGTATTTTCGCTTTC
TTACTGAAGCTGGAAATGATTGAGCGTTGGATTTCATTGGATAAGGAAAGAGGAAATCAATTGTTCCGAAGCATTATTGA
ATCGCTGAAGAATGAGGTACAGATTCCCGCAGAATTCAGATAA

Upstream 100 bases:

>100_bases
GTTCATATAAGGTGAACTTCGGAGAAGAAGAATTCATGAATTACTTCAAAGCGTTCTTGCGTCCTCAATTGGTAGAAATG
CTATTTTAAAAGAAGCGACT

Downstream 100 bases:

>100_bases
TAAATTAAAAAAAATATATGGCAACAAAAGGAACTGTTAGTGGCGTTATTGCCAACATGGTGACCCTCGTCGTTGACGGC
CCGGTAGCTCAGAATGAGAT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 280; Mature: 279

Protein sequence:

>280_residues
MSSKYYYLVAGLPELTLEDSKLSYTVADFKTEIYSGLSASDQKLIDLFYLKFDNANVLKLLKDKEAEIDRRGNYSAAELT
EYISILKEGGEISPKEFPSYLSTFISDYLNTPAESIVLQEDHLAALYYEHAMKCGNKFVSSWFEFNLNINNILVAFTARK
FKWDIASHIVGNTEVCEALRTSSARDFGLSGEVDVFESLVKTSEITELVEREKKLDALRWNWMEDAIFFDYFTVERIFAF
LLKLEMIERWISLDKERGNQLFRSIIESLKNEVQIPAEFR

Sequences:

>Translated_280_residues
MSSKYYYLVAGLPELTLEDSKLSYTVADFKTEIYSGLSASDQKLIDLFYLKFDNANVLKLLKDKEAEIDRRGNYSAAELT
EYISILKEGGEISPKEFPSYLSTFISDYLNTPAESIVLQEDHLAALYYEHAMKCGNKFVSSWFEFNLNINNILVAFTARK
FKWDIASHIVGNTEVCEALRTSSARDFGLSGEVDVFESLVKTSEITELVEREKKLDALRWNWMEDAIFFDYFTVERIFAF
LLKLEMIERWISLDKERGNQLFRSIIESLKNEVQIPAEFR
>Mature_279_residues
SSKYYYLVAGLPELTLEDSKLSYTVADFKTEIYSGLSASDQKLIDLFYLKFDNANVLKLLKDKEAEIDRRGNYSAAELTE
YISILKEGGEISPKEFPSYLSTFISDYLNTPAESIVLQEDHLAALYYEHAMKCGNKFVSSWFEFNLNINNILVAFTARKF
KWDIASHIVGNTEVCEALRTSSARDFGLSGEVDVFESLVKTSEITELVEREKKLDALRWNWMEDAIFFDYFTVERIFAFL
LKLEMIERWISLDKERGNQLFRSIIESLKNEVQIPAEFR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 32411; Mature: 32280

Theoretical pI: Translated: 4.54; Mature: 4.54

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSSKYYYLVAGLPELTLEDSKLSYTVADFKTEIYSGLSASDQKLIDLFYLKFDNANVLKL
CCCCEEEEEECCCCCEECCCCCEEHHHHHHHHHHCCCCCCHHHHHHHHEEEECCCHHHHH
LKDKEAEIDRRGNYSAAELTEYISILKEGGEISPKEFPSYLSTFISDYLNTPAESIVLQE
HHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCHHHEEECC
DHLAALYYEHAMKCGNKFVSSWFEFNLNINNILVAFTARKFKWDIASHIVGNTEVCEALR
CHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEHHHHHHHHHHHHCCCHHHHHHHH
TSSARDFGLSGEVDVFESLVKTSEITELVEREKKLDALRWNWMEDAIFFDYFTVERIFAF
HCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHH
LLKLEMIERWISLDKERGNQLFRSIIESLKNEVQIPAEFR
HHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure 
SSKYYYLVAGLPELTLEDSKLSYTVADFKTEIYSGLSASDQKLIDLFYLKFDNANVLKL
CCCEEEEEECCCCCEECCCCCEEHHHHHHHHHHCCCCCCHHHHHHHHEEEECCCHHHHH
LKDKEAEIDRRGNYSAAELTEYISILKEGGEISPKEFPSYLSTFISDYLNTPAESIVLQE
HHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCHHHEEECC
DHLAALYYEHAMKCGNKFVSSWFEFNLNINNILVAFTARKFKWDIASHIVGNTEVCEALR
CHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEHHHHHHHHHHHHCCCHHHHHHHH
TSSARDFGLSGEVDVFESLVKTSEITELVEREKKLDALRWNWMEDAIFFDYFTVERIFAF
HCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHH
LLKLEMIERWISLDKERGNQLFRSIIESLKNEVQIPAEFR
HHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA