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The map label for this gene is atpD1 [H]

Identifier: 29346707

GI number: 29346707

Start: 1617396

End: 1618001

Strand: Reverse

Name: atpD1 [H]

Synonym: BT_1297

Alternate gene names: 29346707

Gene position: 1618001-1617396 (Counterclockwise)

Preceding gene: 29346708

Following gene: 29346706

Centisome position: 25.85

GC content: 45.05

Gene sequence:

>606_bases
GTGGCTATAAAGTTTCAATATAACAAGACCTCTCTTCAGCAGCTCGAAAAGCAACTGAAAGTGCGGGTGCGTACGCTTCC
TATCATTAAGAATAAGGAAAGCGCCCTCCGCATGGAAGTGAAACGCTGTAAAACGGAAGCTGCCGATCTGGAGGATAGGC
TCGAACAACAAATTCAAGCCTATGAAGCCATGTTCGCCCTTTGGAATGAGTTTGACGCTTCATTGATAAAGGTGAATGAT
GTTCATCTTGGCGTGAAAAAGATTGCGGGTGTACGTGTACCGCTACTCGAAAATATCGATTTCGAGATACGTCCGTACAG
TATGTTTAATGCTCCCAAATGGTATGCCGACGGTATCCATTTGCTGGAGGAACTTGCTCATACGGCAATTGAACGTGAGT
TTATGCTCGCCAAGCTGAACCTGCTAGAACATGCGAGGAAAAAGACCACTCAGAAGGTGAATCTTTTTGAGAAGGTACAG
ATACCGGGCTATCAGGATGCATTGCGAAAGATCAAGCGGTTTATGGAAGATGAAGAGAACCTGTCGAAATCATCGCAAAA
GATCATGAAGTCCCATCAGGAAAAAAGGAAGGAGGTAGAGGCATGA

Upstream 100 bases:

>100_bases
GGAAGAAGTGAATATCAAGAAGGAACTTGTTGACCAATACTGGCCGAAAGGTGAATAATTAGCAACTAGTAATTTATAAC
TAATAATTAGCAAAAACAAC

Downstream 100 bases:

>100_bases
TTACAAAAATGAAGAAACTTACATTCCTGGTTTATCATAAGGAATACGAAGAATTCCTGAATAGCCTGCGCGAACTTGGC
GTGGTCCACATTGTGGAAAA

Product: V-type ATP synthase subunit D

Products: ADP; phosphate; H+

Alternate protein names: V-ATPase subunit D 1 [H]

Number of amino acids: Translated: 201; Mature: 200

Protein sequence:

>201_residues
MAIKFQYNKTSLQQLEKQLKVRVRTLPIIKNKESALRMEVKRCKTEAADLEDRLEQQIQAYEAMFALWNEFDASLIKVND
VHLGVKKIAGVRVPLLENIDFEIRPYSMFNAPKWYADGIHLLEELAHTAIEREFMLAKLNLLEHARKKTTQKVNLFEKVQ
IPGYQDALRKIKRFMEDEENLSKSSQKIMKSHQEKRKEVEA

Sequences:

>Translated_201_residues
MAIKFQYNKTSLQQLEKQLKVRVRTLPIIKNKESALRMEVKRCKTEAADLEDRLEQQIQAYEAMFALWNEFDASLIKVND
VHLGVKKIAGVRVPLLENIDFEIRPYSMFNAPKWYADGIHLLEELAHTAIEREFMLAKLNLLEHARKKTTQKVNLFEKVQ
IPGYQDALRKIKRFMEDEENLSKSSQKIMKSHQEKRKEVEA
>Mature_200_residues
AIKFQYNKTSLQQLEKQLKVRVRTLPIIKNKESALRMEVKRCKTEAADLEDRLEQQIQAYEAMFALWNEFDASLIKVNDV
HLGVKKIAGVRVPLLENIDFEIRPYSMFNAPKWYADGIHLLEELAHTAIEREFMLAKLNLLEHARKKTTQKVNLFEKVQI
PGYQDALRKIKRFMEDEENLSKSSQKIMKSHQEKRKEVEA

Specific function: Produces ATP from ADP in the presence of a proton gradient across the membrane [H]

COG id: COG1394

COG function: function code C; Archaeal/vacuolar-type H+-ATPase subunit D

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the V-ATPase D subunit family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002699 [H]

Pfam domain/function: PF01813 ATP-synt_D [H]

EC number: 3.6.3.14

Molecular weight: Translated: 23644; Mature: 23513

Theoretical pI: Translated: 9.83; Mature: 9.83

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAIKFQYNKTSLQQLEKQLKVRVRTLPIIKNKESALRMEVKRCKTEAADLEDRLEQQIQA
CEEEEECCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHH
YEAMFALWNEFDASLIKVNDVHLGVKKIAGVRVPLLENIDFEIRPYSMFNAPKWYADGIH
HHHHHHHHHHHCCHHEEEHHHHHHHHHHCCCCCHHHHCCCCEECCCHHCCCCCHHHHHHH
LLEELAHTAIEREFMLAKLNLLEHARKKTTQKVNLFEKVQIPGYQDALRKIKRFMEDEEN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH
LSKSSQKIMKSHQEKRKEVEA
HHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
AIKFQYNKTSLQQLEKQLKVRVRTLPIIKNKESALRMEVKRCKTEAADLEDRLEQQIQA
EEEEECCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHH
YEAMFALWNEFDASLIKVNDVHLGVKKIAGVRVPLLENIDFEIRPYSMFNAPKWYADGIH
HHHHHHHHHHHCCHHEEEHHHHHHHHHHCCCCCHHHHCCCCEECCCHHCCCCCHHHHHHH
LLEELAHTAIEREFMLAKLNLLEHARKKTTQKVNLFEKVQIPGYQDALRKIKRFMEDEEN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH
LSKSSQKIMKSHQEKRKEVEA
HHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; H2O; H+

Specific reaction: ATP + H2O + H+(in) = ADP + phosphate + H+(out)

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9665876 [H]