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The map label for this gene is potH [H]

Identifier: 29346700

GI number: 29346700

Start: 1606814

End: 1607590

Strand: Reverse

Name: potH [H]

Synonym: BT_1290

Alternate gene names: 29346700

Gene position: 1607590-1606814 (Counterclockwise)

Preceding gene: 29346701

Following gene: 29346699

Centisome position: 25.68

GC content: 45.69

Gene sequence:

>777_bases
TTGTCATCACGTAAGAGCTGGACTCTTCCTTACATTATTTTCTCGGCGATCTTTGTGGTCATACCGTTGGTTCTAATTGT
CGTGTATGCGTTTACCGATGATAACGGTCATCTGACACTCGCCAATTTTCAGAAATTCTTCGAACATCCCGAAGCGATCA
ATACCTTCGTCTATTCCATAGGTATTGCCATTATTACGACTCTTATCTGTATCCTGCTGGGATATCCCGCAGCCTGGATA
TTAAGCAACAGCAAGCTGAACCGTTCCAAAACAATGGTGGTGTTGTTTATCCTGCCCATGTGGGTGAATATTCTGGTACG
TACCCTTGCCACTGTCGCTTTATTCGACTTTTTCAGCGTTCCGCTGGGAGAGGGAGCACTGATCTTCGGTATGGTTTACA
ACTTTATCCCCTTCATGATCTATCCCATCTATAACACATTGCAGAAGATGGACCATAGCTACATTGAGGCGGCGCAGGAC
TTGGGGGCTAATCCTGTACAGGTCTTTTTCAAAGCAGTTCTCCCGCTTTCCATGCCGGGAGTCATGAGCGGTATCATGAT
GGTGTTTATGCCGACTATTTCGACATTCGCCATTGCCGAACTGCTGACGATGAACAATATCAAACTCTTTGGTACTACCA
TTCAGGAGAATATCAATAACAGTATGTGGAACTATGGGGCAGCACTTTCGCTGATCATGCTGCTGCTGATAGCCGCGACT
TCACTGTTCAGTACCGATGATAAGGATAATACGAACGAAGGAGGTGGGCTATGGTAA

Upstream 100 bases:

>100_bases
ACGGAGACCGTGTGGGTATTACTATCCCTCCGGATGCGATTCGTGTAATTAAAATAACCGATTAACAGGAAAGGAAGTGA
ATAAGAAGTTTATAGTATTT

Downstream 100 bases:

>100_bases
AGAAGATATTCGCTCAGACTTACCTGTGGGTATTACTGCTGTTGCTATATTCCCCTATTGTGATCATTGTGATTTACTCT
TTTACCGAGGCGAAGGTATT

Product: putrescine transport system permease potH

Products: ADP; phosphate; putrescine [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 258; Mature: 257

Protein sequence:

>258_residues
MSSRKSWTLPYIIFSAIFVVIPLVLIVVYAFTDDNGHLTLANFQKFFEHPEAINTFVYSIGIAIITTLICILLGYPAAWI
LSNSKLNRSKTMVVLFILPMWVNILVRTLATVALFDFFSVPLGEGALIFGMVYNFIPFMIYPIYNTLQKMDHSYIEAAQD
LGANPVQVFFKAVLPLSMPGVMSGIMMVFMPTISTFAIAELLTMNNIKLFGTTIQENINNSMWNYGAALSLIMLLLIAAT
SLFSTDDKDNTNEGGGLW

Sequences:

>Translated_258_residues
MSSRKSWTLPYIIFSAIFVVIPLVLIVVYAFTDDNGHLTLANFQKFFEHPEAINTFVYSIGIAIITTLICILLGYPAAWI
LSNSKLNRSKTMVVLFILPMWVNILVRTLATVALFDFFSVPLGEGALIFGMVYNFIPFMIYPIYNTLQKMDHSYIEAAQD
LGANPVQVFFKAVLPLSMPGVMSGIMMVFMPTISTFAIAELLTMNNIKLFGTTIQENINNSMWNYGAALSLIMLLLIAAT
SLFSTDDKDNTNEGGGLW
>Mature_257_residues
SSRKSWTLPYIIFSAIFVVIPLVLIVVYAFTDDNGHLTLANFQKFFEHPEAINTFVYSIGIAIITTLICILLGYPAAWIL
SNSKLNRSKTMVVLFILPMWVNILVRTLATVALFDFFSVPLGEGALIFGMVYNFIPFMIYPIYNTLQKMDHSYIEAAQDL
GANPVQVFFKAVLPLSMPGVMSGIMMVFMPTISTFAIAELLTMNNIKLFGTTIQENINNSMWNYGAALSLIMLLLIAATS
LFSTDDKDNTNEGGGLW

Specific function: Required for the activity of the bacterial periplasmic transport system of putrescine [H]

COG id: COG1176

COG function: function code E; ABC-type spermidine/putrescine transport system, permease component I

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1787080, Length=237, Percent_Identity=34.1772151898734, Blast_Score=141, Evalue=4e-35,
Organism=Escherichia coli, GI1787369, Length=240, Percent_Identity=31.6666666666667, Blast_Score=128, Evalue=5e-31,
Organism=Escherichia coli, GI1787713, Length=197, Percent_Identity=26.9035532994924, Blast_Score=74, Evalue=7e-15,
Organism=Escherichia coli, GI1787368, Length=203, Percent_Identity=26.6009852216749, Blast_Score=64, Evalue=1e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 28758; Mature: 28627

Theoretical pI: Translated: 5.11; Mature: 5.11

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
5.4 %Met     (Translated Protein)
5.8 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
5.1 %Met     (Mature Protein)
5.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSSRKSWTLPYIIFSAIFVVIPLVLIVVYAFTDDNGHLTLANFQKFFEHPEAINTFVYSI
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHEECCCCCEEHHHHHHHHHCHHHHHHHHHHH
GIAIITTLICILLGYPAAWILSNSKLNRSKTMVVLFILPMWVNILVRTLATVALFDFFSV
HHHHHHHHHHHHHCCCHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
PLGEGALIFGMVYNFIPFMIYPIYNTLQKMDHSYIEAAQDLGANPVQVFFKAVLPLSMPG
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCHH
VMSGIMMVFMPTISTFAIAELLTMNNIKLFGTTIQENINNSMWNYGAALSLIMLLLIAAT
HHHHHHHHHHHHHHHHHHHHHHHHCCCCEEHHHHHHHHCHHHHHHHHHHHHHHHHHHHHH
SLFSTDDKDNTNEGGGLW
HHHCCCCCCCCCCCCCCC
>Mature Secondary Structure 
SSRKSWTLPYIIFSAIFVVIPLVLIVVYAFTDDNGHLTLANFQKFFEHPEAINTFVYSI
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHEECCCCCEEHHHHHHHHHCHHHHHHHHHHH
GIAIITTLICILLGYPAAWILSNSKLNRSKTMVVLFILPMWVNILVRTLATVALFDFFSV
HHHHHHHHHHHHHCCCHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
PLGEGALIFGMVYNFIPFMIYPIYNTLQKMDHSYIEAAQDLGANPVQVFFKAVLPLSMPG
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCHH
VMSGIMMVFMPTISTFAIAELLTMNNIKLFGTTIQENINNSMWNYGAALSLIMLLLIAAT
HHHHHHHHHHHHHHHHHHHHHHHHCCCCEEHHHHHHHHCHHHHHHHHHHHHHHHHHHHHH
SLFSTDDKDNTNEGGGLW
HHHCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; putrescine [Periplasm]; H2O [C]

Specific reaction: ATP + putrescine [Periplasm] + H2O = ADP + phosphate + putrescine [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8416922; 8905232; 9278503 [H]