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The map label for this gene is yidE [C]

Identifier: 29346639

GI number: 29346639

Start: 1531038

End: 1532705

Strand: Reverse

Name: yidE [C]

Synonym: BT_1229

Alternate gene names: 29346639

Gene position: 1532705-1531038 (Counterclockwise)

Preceding gene: 29346641

Following gene: 29346638

Centisome position: 24.48

GC content: 48.32

Gene sequence:

>1668_bases
ATGGAGTGGTTATATAATCTGTTTCTCGAACATTCTGCCTTACAGGCAGTTGTGGTGCTTTCACTGATTTCTGCGATTGG
GCTGGGGCTGGGAAGAGTGCATTTCTGGGGAGTATCTCTGGGAGTCACTTTTGTTTTTTTTGCAGGTATCCTTGCCGGAC
ACTTCGGGCTTTCGGTTGATCCACAGATGCTGAATTATGCAGAAAGTTTCGGACTGGTTATTTTCGTATATTCACTGGGG
CTTCAGGTAGGGCCCGGTTTCTTCAGTTCTTTCCGGAAAGGAGGGGTGACGCTGAATATGTTGGCGTTGGCCGTAGTTCT
GTTGGGTACTTTGCTGACTGTTGTTGCCAGTTATGCGACAGGTGTGTCTCTTCCTGATATGGTGGGTATCCTTTGCGGAG
CCACGACTAATACTCCTGCCTTGGGAGCTGCGCAGCAGACACTTAAACAGATGGGCATAGAGAGCAGTACTCCGGCTTTG
GGGTGTGCGGTAGCCTATCCGATGGGAGTGATCGGTGTGATTCTTGCCGTACTGCTGATTCGTAAATTCTTGGTTCATAA
AGAAGACTTGGAGATTAAAGAAAAGGATGATGCCAACAAAACCTTTATCGCAGCGTTTCAAGTACATAACCCCGCTATTT
TTAATAAAAGTATCAAGGATATAGCTCAGATGAGTTATCCGAAATTTGTGATTTCCCGTTTGTGGCGTGACGGTCATGTC
AGTATTCCTACCTCCGACAAGGTATTGAAGGAAGGCGACCGCCTGTTGGTGATCACAGCGGAAAAGAATGTCCTGGCTCT
GACAGTACTTTTCGGTGAACAGGAAGAAAATACGGACTGGAACAAGGAAGATATAGACTGGAATGCAATTGACAGCGAAT
TGATCTCGCAGCGTATCGTCGTAACCCGCCCCGAACTGAATGGAAAGAAACTTGGCTCATTGAGACTAAGAAACCATTAT
GGAATCAATATCAGCCGTGTGTACCGTTCGGGTGTGCAACTACTTGCCACTCCGGAACTGATTCTCCAGCTGGGCGACCG
CCTGACAGTAGTAGGTGAAGCAGCAGCCATTCAGAATGTAGAAAAAGTATTGGGAAATGCAGTGAAAAGTCTGAAAGAAC
CTAATCTTGTTGTCATATTTATAGGCATCGTATTGGGATTGGCATTGGGAGCGATCCCGTTCTCCATACCGGGAATCAGT
ACTCCCGTGAAGCTGGGGCTGGCAGGCGGACCGATTATCGTGGGTATCCTGCTGGGAACTTTCGGCCCACGGATACACAT
GATCACTTACACTACCCGCAGCGCCAATCTGATGCTGCGCGCGTTGGGGCTTTCCATGTATCTAGCCTGTCTTGGTCTGG
ATGCCGGTGCTCATTTCTTCGATACTGTCTTCCGTCCGGAAGGATTGCTTTGGATAGCTTTGGGAGCCGGTCTGACAATT
ATCCCGACGGTCCTGGTCGGCTTTGTCGCTTTCAAGATTATGAAGATAGACTTCGGCAGTGTATCCGGTATGTTGTGCGG
CAGTATGGCGAATCCGATGGCGCTGAATTATGCCAACGATACGATACCGGGTGACAATCCTTCCGTCGCTTATGCTACAG
TATATCCGTTGTGTATGTTTCTGCGTGTGATCATTGCGCAGGTGCTGTTGATGTTTTTATTGGGCTGA

Upstream 100 bases:

>100_bases
TAAGAATTTAGAGAAGAGATAGGGCGCGAAATGAAAGCTTAAAAGTTTTGAATGGGACTAAATAGTTTTTATCTTTGCGC
CCTATTAGTATGTTTAATTC

Downstream 100 bases:

>100_bases
CGATGAACATTAAAGGCTGGAATTTGTAATAAGTAGATGATAAATCGTTATATTTATAGCGATAAACGATAAGTCGATAA
ATAGCATATTGTAAATAGTA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 555; Mature: 555

Protein sequence:

>555_residues
MEWLYNLFLEHSALQAVVVLSLISAIGLGLGRVHFWGVSLGVTFVFFAGILAGHFGLSVDPQMLNYAESFGLVIFVYSLG
LQVGPGFFSSFRKGGVTLNMLALAVVLLGTLLTVVASYATGVSLPDMVGILCGATTNTPALGAAQQTLKQMGIESSTPAL
GCAVAYPMGVIGVILAVLLIRKFLVHKEDLEIKEKDDANKTFIAAFQVHNPAIFNKSIKDIAQMSYPKFVISRLWRDGHV
SIPTSDKVLKEGDRLLVITAEKNVLALTVLFGEQEENTDWNKEDIDWNAIDSELISQRIVVTRPELNGKKLGSLRLRNHY
GINISRVYRSGVQLLATPELILQLGDRLTVVGEAAAIQNVEKVLGNAVKSLKEPNLVVIFIGIVLGLALGAIPFSIPGIS
TPVKLGLAGGPIIVGILLGTFGPRIHMITYTTRSANLMLRALGLSMYLACLGLDAGAHFFDTVFRPEGLLWIALGAGLTI
IPTVLVGFVAFKIMKIDFGSVSGMLCGSMANPMALNYANDTIPGDNPSVAYATVYPLCMFLRVIIAQVLLMFLLG

Sequences:

>Translated_555_residues
MEWLYNLFLEHSALQAVVVLSLISAIGLGLGRVHFWGVSLGVTFVFFAGILAGHFGLSVDPQMLNYAESFGLVIFVYSLG
LQVGPGFFSSFRKGGVTLNMLALAVVLLGTLLTVVASYATGVSLPDMVGILCGATTNTPALGAAQQTLKQMGIESSTPAL
GCAVAYPMGVIGVILAVLLIRKFLVHKEDLEIKEKDDANKTFIAAFQVHNPAIFNKSIKDIAQMSYPKFVISRLWRDGHV
SIPTSDKVLKEGDRLLVITAEKNVLALTVLFGEQEENTDWNKEDIDWNAIDSELISQRIVVTRPELNGKKLGSLRLRNHY
GINISRVYRSGVQLLATPELILQLGDRLTVVGEAAAIQNVEKVLGNAVKSLKEPNLVVIFIGIVLGLALGAIPFSIPGIS
TPVKLGLAGGPIIVGILLGTFGPRIHMITYTTRSANLMLRALGLSMYLACLGLDAGAHFFDTVFRPEGLLWIALGAGLTI
IPTVLVGFVAFKIMKIDFGSVSGMLCGSMANPMALNYANDTIPGDNPSVAYATVYPLCMFLRVIIAQVLLMFLLG
>Mature_555_residues
MEWLYNLFLEHSALQAVVVLSLISAIGLGLGRVHFWGVSLGVTFVFFAGILAGHFGLSVDPQMLNYAESFGLVIFVYSLG
LQVGPGFFSSFRKGGVTLNMLALAVVLLGTLLTVVASYATGVSLPDMVGILCGATTNTPALGAAQQTLKQMGIESSTPAL
GCAVAYPMGVIGVILAVLLIRKFLVHKEDLEIKEKDDANKTFIAAFQVHNPAIFNKSIKDIAQMSYPKFVISRLWRDGHV
SIPTSDKVLKEGDRLLVITAEKNVLALTVLFGEQEENTDWNKEDIDWNAIDSELISQRIVVTRPELNGKKLGSLRLRNHY
GINISRVYRSGVQLLATPELILQLGDRLTVVGEAAAIQNVEKVLGNAVKSLKEPNLVVIFIGIVLGLALGAIPFSIPGIS
TPVKLGLAGGPIIVGILLGTFGPRIHMITYTTRSANLMLRALGLSMYLACLGLDAGAHFFDTVFRPEGLLWIALGAGLTI
IPTVLVGFVAFKIMKIDFGSVSGMLCGSMANPMALNYANDTIPGDNPSVAYATVYPLCMFLRVIIAQVLLMFLLG

Specific function: Unknown

COG id: COG2985

COG function: function code R; Predicted permease

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential)

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 RCK C-terminal domains

Homologues:

Organism=Escherichia coli, GI87082315, Length=552, Percent_Identity=37.1376811594203, Blast_Score=348, Evalue=3e-97,
Organism=Escherichia coli, GI1787071, Length=562, Percent_Identity=25.0889679715303, Blast_Score=153, Evalue=2e-38,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y1229_BACTN (Q8A8D8)

Other databases:

- EMBL:   AE015928
- RefSeq:   NP_810142.1
- ProteinModelPortal:   Q8A8D8
- GeneID:   1073714
- GenomeReviews:   AE015928_GR
- KEGG:   bth:BT_1229
- NMPDR:   fig|226186.1.peg.1229
- HOGENOM:   HBG452396
- OMA:   MANPMAL
- PhylomeDB:   Q8A8D8
- ProtClustDB:   PRK03818
- BioCyc:   BTHE226186:BT_1229-MONOMER
- InterPro:   IPR006037
- InterPro:   IPR006512
- TIGRFAMs:   TIGR01625

Pfam domain/function: PF06826 Asp-Al_Ex; PF02080 TrkA_C

EC number: NA

Molecular weight: Translated: 59618; Mature: 59618

Theoretical pI: Translated: 7.92; Mature: 7.92

Prosite motif: PS51202 RCK_C

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0xb4375c4)-; HASH(0xe74bf54)-; HASH(0xe992088)-; HASH(0xe427c68)-; HASH(0xe968270)-; HASH(0xe75b0f0)-; HASH(0xe6cfbb0)-; HASH(0xe98fa0c)-; HASH(0xe98f8d4)-; HASH(0xe87f434)-; HASH(0xe1c9c78)-;

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHHHHHHHHCH
>Mature Secondary Structure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HHHHHHHHHHHHHCH

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 12663928