| Definition | Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome. |
|---|---|
| Accession | NC_004663 |
| Length | 6,260,361 |
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The map label for this gene is 29346502
Identifier: 29346502
GI number: 29346502
Start: 1380460
End: 1380819
Strand: Reverse
Name: 29346502
Synonym: BT_1092
Alternate gene names: NA
Gene position: 1380819-1380460 (Counterclockwise)
Preceding gene: 29346503
Following gene: 29346501
Centisome position: 22.06
GC content: 44.72
Gene sequence:
>360_bases ATGAGAACAAAAAGATGGATGGCCACTTGCGTGGTGGCTCTTTTGAGCGTAGCAGCCGTGTTGGCAAAGGATATCCGTGT AGTCATATTCAAAGTCTCTCAGATGCACTGCGAGAACTGCGAGAAGAAAGTGAAAAATAACATGCGCTTCGAGAAAGGCG TGAAGGAACTTTCCACCGAACTGAAGAACAAAACCGTGTCCATCACCTACGATGCCGAAAAGACAGATGTGAAGAAGTTG CAGGCAGGATTCAAAAAGTTCAATTATGAGGCCGAGTTTGTGAAGGAAACCAAGCAGGACGGCAAGAAAGATGGCAAACA AGAATCTAAGAAAGAGGATAAGAAGGCCGATAAGAAGTAA
Upstream 100 bases:
>100_bases CAACGATGATATGGGGACCTGTGCACGGGGCAAAAGCCTATATCGGAATACGTTTCAATCTGGCAAGAAATGAATAATAA CCATTAAACGAATAAGAAAA
Downstream 100 bases:
>100_bases TCGAACAAATACCCGTATTTGCTTGTTTTATAAATACTAATTAATTAAAGAGTAAAGGATTATATGGGTAATATAGCAAA AAAAGCGTTTCCCGTGCTTA
Product: putative heavy-metal binding protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 119; Mature: 119
Protein sequence:
>119_residues MRTKRWMATCVVALLSVAAVLAKDIRVVIFKVSQMHCENCEKKVKNNMRFEKGVKELSTELKNKTVSITYDAEKTDVKKL QAGFKKFNYEAEFVKETKQDGKKDGKQESKKEDKKADKK
Sequences:
>Translated_119_residues MRTKRWMATCVVALLSVAAVLAKDIRVVIFKVSQMHCENCEKKVKNNMRFEKGVKELSTELKNKTVSITYDAEKTDVKKL QAGFKKFNYEAEFVKETKQDGKKDGKQESKKEDKKADKK >Mature_119_residues MRTKRWMATCVVALLSVAAVLAKDIRVVIFKVSQMHCENCEKKVKNNMRFEKGVKELSTELKNKTVSITYDAEKTDVKKL QAGFKKFNYEAEFVKETKQDGKKDGKQESKKEDKKADKK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13723; Mature: 13723
Theoretical pI: Translated: 10.35; Mature: 10.35
Prosite motif: PS50846 HMA_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.5 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 5.9 %Cys+Met (Translated Protein) 2.5 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 5.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRTKRWMATCVVALLSVAAVLAKDIRVVIFKVSQMHCENCEKKVKNNMRFEKGVKELSTE CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH LKNKTVSITYDAEKTDVKKLQAGFKKFNYEAEFVKETKQDGKKDGKQESKKEDKKADKK HCCCEEEEEECCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCHHHHHHHHHCCCCC >Mature Secondary Structure MRTKRWMATCVVALLSVAAVLAKDIRVVIFKVSQMHCENCEKKVKNNMRFEKGVKELSTE CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH LKNKTVSITYDAEKTDVKKLQAGFKKFNYEAEFVKETKQDGKKDGKQESKKEDKKADKK HCCCEEEEEECCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA