| Definition | Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome. |
|---|---|
| Accession | NC_004663 |
| Length | 6,260,361 |
Click here to switch to the map view.
The map label for this gene is 29346478
Identifier: 29346478
GI number: 29346478
Start: 1356084
End: 1356428
Strand: Reverse
Name: 29346478
Synonym: BT_1068
Alternate gene names: NA
Gene position: 1356428-1356084 (Counterclockwise)
Preceding gene: 29346479
Following gene: 29346477
Centisome position: 21.67
GC content: 32.75
Gene sequence:
>345_bases ATGAGATTAGAGGGATTTAAAGTGAATATTGGGTTGTTCAACCTTTTATTATTAGTAGCTATATTATCTTGTATGGATGA TACTTTCACTAATAATACTACTGCCAAAGGGACATTTATTTCGATCAGAGGAATAGGTGTTCAGAGCAGTACACATCTAG TCAATCCGGAAACGTATGATTTTGTATTTTTTGCCAATGAACCGTATAATATTCCCGTAATAAACCAATTGAATTATATT ACTGCTTATGATAATCTGAATGATATTGTGTATTCAGAACGCTATTCCTTGTCCGAACAATTAATTCCGATGATACAGGA GGTTAATTATCAATACGTTGCGTGA
Upstream 100 bases:
>100_bases GCAGAGTCATGCAATATCCCGACATTTGCATTATGAGATTTTGACTGATTACAGATTAAGGCTTGACTGAGTACCAATGT CAGGTAAATACGAATGTTTA
Downstream 100 bases:
>100_bases AAAGATGAAGAAAATGATGAAATATATAATGAAGATATTTGGTCTGGTGATCATCTTACTGATATCCGCCTGTGAGCATG AAACATTGTTGACGGGAGAG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 114; Mature: 114
Protein sequence:
>114_residues MRLEGFKVNIGLFNLLLLVAILSCMDDTFTNNTTAKGTFISIRGIGVQSSTHLVNPETYDFVFFANEPYNIPVINQLNYI TAYDNLNDIVYSERYSLSEQLIPMIQEVNYQYVA
Sequences:
>Translated_114_residues MRLEGFKVNIGLFNLLLLVAILSCMDDTFTNNTTAKGTFISIRGIGVQSSTHLVNPETYDFVFFANEPYNIPVINQLNYI TAYDNLNDIVYSERYSLSEQLIPMIQEVNYQYVA >Mature_114_residues MRLEGFKVNIGLFNLLLLVAILSCMDDTFTNNTTAKGTFISIRGIGVQSSTHLVNPETYDFVFFANEPYNIPVINQLNYI TAYDNLNDIVYSERYSLSEQLIPMIQEVNYQYVA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13015; Mature: 13015
Theoretical pI: Translated: 4.13; Mature: 4.13
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRLEGFKVNIGLFNLLLLVAILSCMDDTFTNNTTAKGTFISIRGIGVQSSTHLVNPETYD CCCCCEEEEHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEECCCCCCCEEECCCCEE FVFFANEPYNIPVINQLNYITAYDNLNDIVYSERYSLSEQLIPMIQEVNYQYVA EEEECCCCCCCCEECCCEEEEECCCCCHHHHCCCCCHHHHHHHHHHHCCEEECC >Mature Secondary Structure MRLEGFKVNIGLFNLLLLVAILSCMDDTFTNNTTAKGTFISIRGIGVQSSTHLVNPETYD CCCCCEEEEHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEECCCCCCCEEECCCCEE FVFFANEPYNIPVINQLNYITAYDNLNDIVYSERYSLSEQLIPMIQEVNYQYVA EEEECCCCCCCCEECCCEEEEECCCCCHHHHCCCCCHHHHHHHHHHHCCEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA