Definition Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome.
Accession NC_004663
Length 6,260,361

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The map label for this gene is 29346478

Identifier: 29346478

GI number: 29346478

Start: 1356084

End: 1356428

Strand: Reverse

Name: 29346478

Synonym: BT_1068

Alternate gene names: NA

Gene position: 1356428-1356084 (Counterclockwise)

Preceding gene: 29346479

Following gene: 29346477

Centisome position: 21.67

GC content: 32.75

Gene sequence:

>345_bases
ATGAGATTAGAGGGATTTAAAGTGAATATTGGGTTGTTCAACCTTTTATTATTAGTAGCTATATTATCTTGTATGGATGA
TACTTTCACTAATAATACTACTGCCAAAGGGACATTTATTTCGATCAGAGGAATAGGTGTTCAGAGCAGTACACATCTAG
TCAATCCGGAAACGTATGATTTTGTATTTTTTGCCAATGAACCGTATAATATTCCCGTAATAAACCAATTGAATTATATT
ACTGCTTATGATAATCTGAATGATATTGTGTATTCAGAACGCTATTCCTTGTCCGAACAATTAATTCCGATGATACAGGA
GGTTAATTATCAATACGTTGCGTGA

Upstream 100 bases:

>100_bases
GCAGAGTCATGCAATATCCCGACATTTGCATTATGAGATTTTGACTGATTACAGATTAAGGCTTGACTGAGTACCAATGT
CAGGTAAATACGAATGTTTA

Downstream 100 bases:

>100_bases
AAAGATGAAGAAAATGATGAAATATATAATGAAGATATTTGGTCTGGTGATCATCTTACTGATATCCGCCTGTGAGCATG
AAACATTGTTGACGGGAGAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 114; Mature: 114

Protein sequence:

>114_residues
MRLEGFKVNIGLFNLLLLVAILSCMDDTFTNNTTAKGTFISIRGIGVQSSTHLVNPETYDFVFFANEPYNIPVINQLNYI
TAYDNLNDIVYSERYSLSEQLIPMIQEVNYQYVA

Sequences:

>Translated_114_residues
MRLEGFKVNIGLFNLLLLVAILSCMDDTFTNNTTAKGTFISIRGIGVQSSTHLVNPETYDFVFFANEPYNIPVINQLNYI
TAYDNLNDIVYSERYSLSEQLIPMIQEVNYQYVA
>Mature_114_residues
MRLEGFKVNIGLFNLLLLVAILSCMDDTFTNNTTAKGTFISIRGIGVQSSTHLVNPETYDFVFFANEPYNIPVINQLNYI
TAYDNLNDIVYSERYSLSEQLIPMIQEVNYQYVA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 13015; Mature: 13015

Theoretical pI: Translated: 4.13; Mature: 4.13

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRLEGFKVNIGLFNLLLLVAILSCMDDTFTNNTTAKGTFISIRGIGVQSSTHLVNPETYD
CCCCCEEEEHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEECCCCCCCEEECCCCEE
FVFFANEPYNIPVINQLNYITAYDNLNDIVYSERYSLSEQLIPMIQEVNYQYVA
EEEECCCCCCCCEECCCEEEEECCCCCHHHHCCCCCHHHHHHHHHHHCCEEECC
>Mature Secondary Structure
MRLEGFKVNIGLFNLLLLVAILSCMDDTFTNNTTAKGTFISIRGIGVQSSTHLVNPETYD
CCCCCEEEEHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEECCCCCCCEEECCCCEE
FVFFANEPYNIPVINQLNYITAYDNLNDIVYSERYSLSEQLIPMIQEVNYQYVA
EEEECCCCCCCCEECCCEEEEECCCCCHHHHCCCCCHHHHHHHHHHHCCEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA