| Definition | Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome. |
|---|---|
| Accession | NC_004663 |
| Length | 6,260,361 |
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The map label for this gene is fepA [C]
Identifier: 29346450
GI number: 29346450
Start: 1312432
End: 1315194
Strand: Reverse
Name: fepA [C]
Synonym: BT_1040
Alternate gene names: 29346450
Gene position: 1315194-1312432 (Counterclockwise)
Preceding gene: 29346451
Following gene: 29346449
Centisome position: 21.01
GC content: 37.35
Gene sequence:
>2763_bases ATGGGTGAAGACACGCAAACCTTGGACGAAGTAGTAGTTACTGCGTTGGGTATCAAACGTGAACAAAAAGCGTTGAGTTA TAATGTACAGCAAGTAAAGGGAGATGAATTGACTAATATAAAGGATGCTAACTTTATTAATGCTTTATCAGGAAAAGTAG CTGGCGTAACAATAAATGCTTCTTCAGCCGGTGCTGGGGCTGCGGCTCGTGTAGTTATGCGTGGTACAAAGTCTTTGGAG AAAAATGATAATGCACTTTATGTTATTGATGGTATTCCAATGTTTAATGTAAATTCAGGAGATAATGCTGGAGGTACGAT GAACAAACAGCCAGGATCTAATAGCGTAGCTGATATTAATCCTGAAGATATTGAGAGCATGACAATTTTAACAGGACCTT CCGCTGCAGCCTTGTATGGTTCGGATGCTTCTAATGGAGTTATTCTTATCACTACTAAAAAAGGTACTGTAGGAAAAGTG CAAATTTCTTATAGTAATAGTACAAGTTTTTCATCTCCGATGATGATGCCGAAGTTTCAGAATATTTATGGTAATCGTGA AGGAGAGTTAGGCAGTTGGGGGAGCTTGATGGATACTCCTAGCAACTTTGATCCATCTGACTTCTTCAATACGGGAATGA CGGAGATGAATGGTTTCACGTTGACCACTGGTACTGAACAAAATCAAACTTACGCATCTGTCTCTACTACAAACTCTACA GGTATCTTACCTAATAATGCTTATAACCGCTATAATTTCTCTATTCGTAATACCGCTAAATTCTGTGATAATAAGTTGAG TCTTGATTTGGGAGCTCAATATATTATTCAAAATAATAAGAATATGGTAGGTAGTGGACAATATTTTAATCCCTTGGTAT CTCTTTATCTTTTTCCACGAGGTGAAAACTTTCAGGAAGTACAGATGTATGAACGCTATAGTGAGGCTCGAAACCTTATG GTACAATATTGGCCGGAATCTATATTTGGTACTGATTTGGATATGCAAAACCCATATTGGATTATGAATCGAATGCAGAA TGAGCTTTCTAAACGTCGTTATATGTTTAATGCTAGTCTGAAATGGGATATAACAGATTGGGTGAATGTAACAGGGCGAG TACGTGTGGATAATTCAGATAGCGATAGTTATGAAAAGTATTATGCTAGTACACGAGGTACTTTTACAGAAAGTAGTTCT AAAGGTTATTATGGACATACTAAACAAAATGATCGGTCTGTTTATGCTGATGTAATGGCTAGCATAAATAAGAATTTCTT TGATGACAAACTTTCATTGAATGCAACTGTTGGTGCTTCTATTAATGATATTCAGGAAGATGCTATGTATCTAAAGGGAG GATTGGAGCAAATTCCTAATTTCTTCCATTATGGCAATATTAATGTCAATACTTCCAAGCGTAATGAATCAAAATGGCAT GATCAAGTACAAAGTGTTTTTGCAAGTGCAGAATTAGGATGGAATCATCAATTGTATTTGACTGTCACTGGGCGTAATGA CTGGGCATCTCAATTAGCTTTTACCAGCAAAGGTTCCTACTTTTATCCGTCTGTTGGTCTGTCATGGCTTGTTAGTGAAT CTGTAAAGCTACCAAAAGCTATTTCTTATTTGAAAGTTCGTGGTTCGTGGGCGGAGGTCGCTTCTTCCCCTAATCGATAC CTTACCCAAATGCAATATACTTATAATGAGCAAACAAATACATATGAATATCCTGCAAGTCATTATAATACTAATCTGAA ACCAGAAAATACAAAATCATGGGAACTAGGCGTCAATGCTAAATTCCTTGGCAACCGTATTAATTTAGATATGACCTTCT ATCGTTCTAATACCTTCAATCAGACATTCTATGTTGATGCATCGGCTTCATCTGGATATAAGAATAATATTGTGCAGACT GGTAATATTCAGAATCAGGGTATTGAGCTGGCTTTAGGATATTCTGATACATTTGATAAAGTGAAGGTATCTACAAATTT CACTTACACTCTTAATCAAAACAAGATCGTTAGTTTAGCGAATGGTGCCATCAATCCGGAAACCGGCGAAGCTATCGAAA TGGAGTATTACTCAAAAGGAACATTGGGAACTAGTGGTGGTCCGACTTTAAGACTCTATGAAAACGGATCAATGGGAGAT ATTTATATCAATCAGCGTTTGCGTCAGTCTCCTAATGGATATATTTGGAAAGACCCCTCTAATGGAAGTTTGGCTATTGA AAATACGGAATACCGCAAGGTTGGCTCTATTCTTCCTAAATATTATTTGGGATGGAATGGTAGTGTTGCTTGGAAGGGAT GGAATCTTGGATTTGCATTCACCGGGCGTTTTGGAGGATTAGTTGTATCGGATACACAAGCCATGATTGATAAATATGGT GTATCTGAAAGTTCTGCAGTTGCTCGTCAGGCAGGCGGTGTATGGGTTGGAGACAGTAAAGTGGATGCTGAGGAATATTA TAGTAAAGTAACTACTGCTGTTGGTACTTATTATACATATAGTGCAACGAATATTCGCCTTTCTGAACTGAGCTTGAGCT ACCAACTTCCTAAAACATGGTTCAAAAATCATGTAAATATGACACTGGGGCTTACAGGAAAGAATTTATGGATGATTTAT TGTAAAGCACCTTATGATCCGGAAAGTACATCTTCTGTCACTAGTAATTTCTATCAGGGGGTTGACTATTTTCAACAACC TAGTTTGAGAAGTCTCGGATTTAATGTCAAACTAACATTCTAG
Upstream 100 bases:
>100_bases GCTATTCTTAAAAATAGAACATAAAGAAGTATGAAAACAGCTATAAATTCATTACTCCCAATCAATCACGCTTGCCAACG CCCAACCCCTAAAAGTCACA
Downstream 100 bases:
>100_bases TTTAGATTATGAAAAAGAATAAGATAATAAAGAAGTTTGCAAAACTGTCTGTGTATACTTTGTTAGTAGCACTAGGAACA GGTTGTACCGATAAATTTGA
Product: hypothetical protein
Products: NA
Alternate protein names: Outer Membrane Protein; NB-Dependent Receptor; Nb-Dependent Receptor Plug; Outer Membrane Protein Omp; NB-Dependent Outer Membrane Receptor; NB-Dependent Receptor Plug Domain Protein; NB Dependent/Ligand-Gated Channel; NB Dependent Receptor; Outer Membrane Receptor RagA Protein; NB-Linked Outer Membrane Protein; SusC Protein
Number of amino acids: Translated: 920; Mature: 919
Protein sequence:
>920_residues MGEDTQTLDEVVVTALGIKREQKALSYNVQQVKGDELTNIKDANFINALSGKVAGVTINASSAGAGAAARVVMRGTKSLE KNDNALYVIDGIPMFNVNSGDNAGGTMNKQPGSNSVADINPEDIESMTILTGPSAAALYGSDASNGVILITTKKGTVGKV QISYSNSTSFSSPMMMPKFQNIYGNREGELGSWGSLMDTPSNFDPSDFFNTGMTEMNGFTLTTGTEQNQTYASVSTTNST GILPNNAYNRYNFSIRNTAKFCDNKLSLDLGAQYIIQNNKNMVGSGQYFNPLVSLYLFPRGENFQEVQMYERYSEARNLM VQYWPESIFGTDLDMQNPYWIMNRMQNELSKRRYMFNASLKWDITDWVNVTGRVRVDNSDSDSYEKYYASTRGTFTESSS KGYYGHTKQNDRSVYADVMASINKNFFDDKLSLNATVGASINDIQEDAMYLKGGLEQIPNFFHYGNINVNTSKRNESKWH DQVQSVFASAELGWNHQLYLTVTGRNDWASQLAFTSKGSYFYPSVGLSWLVSESVKLPKAISYLKVRGSWAEVASSPNRY LTQMQYTYNEQTNTYEYPASHYNTNLKPENTKSWELGVNAKFLGNRINLDMTFYRSNTFNQTFYVDASASSGYKNNIVQT GNIQNQGIELALGYSDTFDKVKVSTNFTYTLNQNKIVSLANGAINPETGEAIEMEYYSKGTLGTSGGPTLRLYENGSMGD IYINQRLRQSPNGYIWKDPSNGSLAIENTEYRKVGSILPKYYLGWNGSVAWKGWNLGFAFTGRFGGLVVSDTQAMIDKYG VSESSAVARQAGGVWVGDSKVDAEEYYSKVTTAVGTYYTYSATNIRLSELSLSYQLPKTWFKNHVNMTLGLTGKNLWMIY CKAPYDPESTSSVTSNFYQGVDYFQQPSLRSLGFNVKLTF
Sequences:
>Translated_920_residues MGEDTQTLDEVVVTALGIKREQKALSYNVQQVKGDELTNIKDANFINALSGKVAGVTINASSAGAGAAARVVMRGTKSLE KNDNALYVIDGIPMFNVNSGDNAGGTMNKQPGSNSVADINPEDIESMTILTGPSAAALYGSDASNGVILITTKKGTVGKV QISYSNSTSFSSPMMMPKFQNIYGNREGELGSWGSLMDTPSNFDPSDFFNTGMTEMNGFTLTTGTEQNQTYASVSTTNST GILPNNAYNRYNFSIRNTAKFCDNKLSLDLGAQYIIQNNKNMVGSGQYFNPLVSLYLFPRGENFQEVQMYERYSEARNLM VQYWPESIFGTDLDMQNPYWIMNRMQNELSKRRYMFNASLKWDITDWVNVTGRVRVDNSDSDSYEKYYASTRGTFTESSS KGYYGHTKQNDRSVYADVMASINKNFFDDKLSLNATVGASINDIQEDAMYLKGGLEQIPNFFHYGNINVNTSKRNESKWH DQVQSVFASAELGWNHQLYLTVTGRNDWASQLAFTSKGSYFYPSVGLSWLVSESVKLPKAISYLKVRGSWAEVASSPNRY LTQMQYTYNEQTNTYEYPASHYNTNLKPENTKSWELGVNAKFLGNRINLDMTFYRSNTFNQTFYVDASASSGYKNNIVQT GNIQNQGIELALGYSDTFDKVKVSTNFTYTLNQNKIVSLANGAINPETGEAIEMEYYSKGTLGTSGGPTLRLYENGSMGD IYINQRLRQSPNGYIWKDPSNGSLAIENTEYRKVGSILPKYYLGWNGSVAWKGWNLGFAFTGRFGGLVVSDTQAMIDKYG VSESSAVARQAGGVWVGDSKVDAEEYYSKVTTAVGTYYTYSATNIRLSELSLSYQLPKTWFKNHVNMTLGLTGKNLWMIY CKAPYDPESTSSVTSNFYQGVDYFQQPSLRSLGFNVKLTF >Mature_919_residues GEDTQTLDEVVVTALGIKREQKALSYNVQQVKGDELTNIKDANFINALSGKVAGVTINASSAGAGAAARVVMRGTKSLEK NDNALYVIDGIPMFNVNSGDNAGGTMNKQPGSNSVADINPEDIESMTILTGPSAAALYGSDASNGVILITTKKGTVGKVQ ISYSNSTSFSSPMMMPKFQNIYGNREGELGSWGSLMDTPSNFDPSDFFNTGMTEMNGFTLTTGTEQNQTYASVSTTNSTG ILPNNAYNRYNFSIRNTAKFCDNKLSLDLGAQYIIQNNKNMVGSGQYFNPLVSLYLFPRGENFQEVQMYERYSEARNLMV QYWPESIFGTDLDMQNPYWIMNRMQNELSKRRYMFNASLKWDITDWVNVTGRVRVDNSDSDSYEKYYASTRGTFTESSSK GYYGHTKQNDRSVYADVMASINKNFFDDKLSLNATVGASINDIQEDAMYLKGGLEQIPNFFHYGNINVNTSKRNESKWHD QVQSVFASAELGWNHQLYLTVTGRNDWASQLAFTSKGSYFYPSVGLSWLVSESVKLPKAISYLKVRGSWAEVASSPNRYL TQMQYTYNEQTNTYEYPASHYNTNLKPENTKSWELGVNAKFLGNRINLDMTFYRSNTFNQTFYVDASASSGYKNNIVQTG NIQNQGIELALGYSDTFDKVKVSTNFTYTLNQNKIVSLANGAINPETGEAIEMEYYSKGTLGTSGGPTLRLYENGSMGDI YINQRLRQSPNGYIWKDPSNGSLAIENTEYRKVGSILPKYYLGWNGSVAWKGWNLGFAFTGRFGGLVVSDTQAMIDKYGV SESSAVARQAGGVWVGDSKVDAEEYYSKVTTAVGTYYTYSATNIRLSELSLSYQLPKTWFKNHVNMTLGLTGKNLWMIYC KAPYDPESTSSVTSNFYQGVDYFQQPSLRSLGFNVKLTF
Specific function: This Protein Is Involved In The Initial Step Of Iron Uptake By Binding Ferrienterobactin (Fe-Ent), An Iron Chelatin Siderophore That Allows E.Coli To Extract Iron From The Environment. Fepa Also Acts As A Receptor For Colicins B And D. [C]
COG id: COG4771
COG function: function code P; Outer membrane receptor for ferrienterochelin and colicins
Gene ontology:
Cell location: Integral Membrane Protein. Outer Membrane [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 102511; Mature: 102380
Theoretical pI: Translated: 6.09; Mature: 6.09
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGEDTQTLDEVVVTALGIKREQKALSYNVQQVKGDELTNIKDANFINALSGKVAGVTINA CCCCHHHHHHHHHHHHCCCHHHHHHHCCHHHCCCCCCCCCCCCCHHHHCCCCEEEEEEEC SSAGAGAAARVVMRGTKSLEKNDNALYVIDGIPMFNVNSGDNAGGTMNKQPGSNSVADIN CCCCCCHHHHHHHHCCCCCCCCCCEEEEEECCEEEECCCCCCCCCCCCCCCCCCCCCCCC PEDIESMTILTGPSAAALYGSDASNGVILITTKKGTVGKVQISYSNSTSFSSPMMMPKFQ HHHCCEEEEEECCCCEEEECCCCCCCEEEEEECCCCEEEEEEEECCCCCCCCCCCCCCHH NIYGNREGELGSWGSLMDTPSNFDPSDFFNTGMTEMNGFTLTTGTEQNQTYASVSTTNST HHCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCEEEECCCCCCCEEEEEEECCCC GILPNNAYNRYNFSIRNTAKFCDNKLSLDLGAQYIIQNNKNMVGSGQYFNPLVSLYLFPR CCCCCCCCCEEEEEECCHHHHCCCCCEEECCEEEEEECCCCEEECCCHHCCEEEEEEECC GENFQEVQMYERYSEARNLMVQYWPESIFGTDLDMQNPYWIMNRMQNELSKRRYMFNASL CCCHHHHHHHHHHHHHHCEEEEECCHHHCCCCCCCCCCHHHHHHHHHHHHHHEEEEECCE KWDITDWVNVTGRVRVDNSDSDSYEKYYASTRGTFTESSSKGYYGHTKQNDRSVYADVMA EEECHHHCCCEEEEEECCCCCCHHHHHHHHCCCCEECCCCCCCCCCCCCCCHHHHHHHHH SINKNFFDDKLSLNATVGASINDIQEDAMYLKGGLEQIPNFFHYGNINVNTSKRNESKWH HHCCCCCCCCEEEEEEECCCHHHHHHHHHHHHCCHHHCCCEEEECCEEEECCCCCCHHHH DQVQSVFASAELGWNHQLYLTVTGRNDWASQLAFTSKGSYFYPSVGLSWLVSESVKLPKA HHHHHHHHHHCCCCCEEEEEEEECCCCHHHHEEEECCCCEEECCCCHHHHHHCCCCCCHH ISYLKVRGSWAEVASSPNRYLTQMQYTYNEQTNTYEYPASHYNTNLKPENTKSWELGVNA EEEEEECCCHHHHHCCCCCEEEEEEEEECCCCCCEECCHHHCCCCCCCCCCCCEEECCCC KFLGNRINLDMTFYRSNTFNQTFYVDASASSGYKNNIVQTGNIQNQGIELALGYSDTFDK EEECCEEEEEEEEEECCCCCEEEEEECCCCCCCCCCCEEECCCCCCCEEEEECCCCCCCE VKVSTNFTYTLNQNKIVSLANGAINPETGEAIEMEYYSKGTLGTSGGPTLRLYENGSMGD EEEEEEEEEEECCCEEEEEECCCCCCCCCCEEEEEEECCCCCCCCCCCEEEEEECCCCCE IYINQRLRQSPNGYIWKDPSNGSLAIENTEYRKVGSILPKYYLGWNGSVAWKGWNLGFAF EEECHHHHCCCCCCEEECCCCCCEEEECCHHHHHHHHCCCEEECCCCEEEEECCCCCEEE TGRFGGLVVSDTQAMIDKYGVSESSAVARQAGGVWVGDSKVDAEEYYSKVTTAVGTYYTY ECCCCCEEEECHHHHHHHCCCCCHHHHHHHCCCEEECCCCCCHHHHHHHHHHHHCCEEEE SATNIRLSELSLSYQLPKTWFKNHVNMTLGLTGKNLWMIYCKAPYDPESTSSVTSNFYQG EECEEEEEEEEEEEECCHHHHCCCCEEEEEECCCCEEEEEEECCCCCCCCHHHHHHHHHH VDYFQQPSLRSLGFNVKLTF HHHHCCCCHHHCCCEEEEEC >Mature Secondary Structure GEDTQTLDEVVVTALGIKREQKALSYNVQQVKGDELTNIKDANFINALSGKVAGVTINA CCCHHHHHHHHHHHHCCCHHHHHHHCCHHHCCCCCCCCCCCCCHHHHCCCCEEEEEEEC SSAGAGAAARVVMRGTKSLEKNDNALYVIDGIPMFNVNSGDNAGGTMNKQPGSNSVADIN CCCCCCHHHHHHHHCCCCCCCCCCEEEEEECCEEEECCCCCCCCCCCCCCCCCCCCCCCC PEDIESMTILTGPSAAALYGSDASNGVILITTKKGTVGKVQISYSNSTSFSSPMMMPKFQ HHHCCEEEEEECCCCEEEECCCCCCCEEEEEECCCCEEEEEEEECCCCCCCCCCCCCCHH NIYGNREGELGSWGSLMDTPSNFDPSDFFNTGMTEMNGFTLTTGTEQNQTYASVSTTNST HHCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCEEEECCCCCCCEEEEEEECCCC GILPNNAYNRYNFSIRNTAKFCDNKLSLDLGAQYIIQNNKNMVGSGQYFNPLVSLYLFPR CCCCCCCCCEEEEEECCHHHHCCCCCEEECCEEEEEECCCCEEECCCHHCCEEEEEEECC GENFQEVQMYERYSEARNLMVQYWPESIFGTDLDMQNPYWIMNRMQNELSKRRYMFNASL CCCHHHHHHHHHHHHHHCEEEEECCHHHCCCCCCCCCCHHHHHHHHHHHHHHEEEEECCE KWDITDWVNVTGRVRVDNSDSDSYEKYYASTRGTFTESSSKGYYGHTKQNDRSVYADVMA EEECHHHCCCEEEEEECCCCCCHHHHHHHHCCCCEECCCCCCCCCCCCCCCHHHHHHHHH SINKNFFDDKLSLNATVGASINDIQEDAMYLKGGLEQIPNFFHYGNINVNTSKRNESKWH HHCCCCCCCCEEEEEEECCCHHHHHHHHHHHHCCHHHCCCEEEECCEEEECCCCCCHHHH DQVQSVFASAELGWNHQLYLTVTGRNDWASQLAFTSKGSYFYPSVGLSWLVSESVKLPKA HHHHHHHHHHCCCCCEEEEEEEECCCCHHHHEEEECCCCEEECCCCHHHHHHCCCCCCHH ISYLKVRGSWAEVASSPNRYLTQMQYTYNEQTNTYEYPASHYNTNLKPENTKSWELGVNA EEEEEECCCHHHHHCCCCCEEEEEEEEECCCCCCEECCHHHCCCCCCCCCCCCEEECCCC KFLGNRINLDMTFYRSNTFNQTFYVDASASSGYKNNIVQTGNIQNQGIELALGYSDTFDK EEECCEEEEEEEEEECCCCCEEEEEECCCCCCCCCCCEEECCCCCCCEEEEECCCCCCCE VKVSTNFTYTLNQNKIVSLANGAINPETGEAIEMEYYSKGTLGTSGGPTLRLYENGSMGD EEEEEEEEEEECCCEEEEEECCCCCCCCCCEEEEEEECCCCCCCCCCCEEEEEECCCCCE IYINQRLRQSPNGYIWKDPSNGSLAIENTEYRKVGSILPKYYLGWNGSVAWKGWNLGFAF EEECHHHHCCCCCCEEECCCCCCEEEECCHHHHHHHHCCCEEECCCCEEEEECCCCCEEE TGRFGGLVVSDTQAMIDKYGVSESSAVARQAGGVWVGDSKVDAEEYYSKVTTAVGTYYTY ECCCCCEEEECHHHHHHHCCCCCHHHHHHHCCCEEECCCCCCHHHHHHHHHHHHCCEEEE SATNIRLSELSLSYQLPKTWFKNHVNMTLGLTGKNLWMIYCKAPYDPESTSSVTSNFYQG EECEEEEEEEEEEEECCHHHHCCCCEEEEEECCCCEEEEEEECCCCCCCCHHHHHHHHHH VDYFQQPSLRSLGFNVKLTF HHHHCCCCHHHCCCEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA