| Definition | Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome. |
|---|---|
| Accession | NC_004663 |
| Length | 6,260,361 |
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The map label for this gene is 29346445
Identifier: 29346445
GI number: 29346445
Start: 1304823
End: 1307027
Strand: Reverse
Name: 29346445
Synonym: BT_1035
Alternate gene names: NA
Gene position: 1307027-1304823 (Counterclockwise)
Preceding gene: 29346446
Following gene: 29346444
Centisome position: 20.88
GC content: 41.77
Gene sequence:
>2205_bases ATGAGAATCATTCGCCGTATTATTTTTCAGCTGCTTTGTTTGTTGGGAGCATGTTGTTATATTCCTGCAACAGCACAAGT CGTTTTAGTTGATAATGGAAAAACTAAATCCAGGATTATTCTATCAGAAAATGACCAGATTAATCAAATATCAGCAAATT TATTTCAATTGTTCCTTCAGAGAATTTCAGGTTGTACATTTCCCATTGTAAAAGGGCAGAATGCAAAAAAAGGAGATATT ATAATCAGTAGCAAAACCCCAGCTGGAGTGACAGAAGACGGTTTCAGCCTATCTACGAAAGATGGAATCTTACGTATTTC AGGCAGTGGGAATGGGACAGTCTACGGAGTTGTAACTTTACTCGAACAATATCTTGGAGTGGATTACTGGGGAGAAAACG AATACTCTTTTAACCCTGCGAAGACAATCGAACTGCCGCTTATCGATAAAATAGATAATCCGGCTTTCCGTTACCGCCAG ACACAATGTTATGCTATTCGTACAGACTCCATATATAAATGGTGGAACAGGCTGGAAGAGCCAAACGAAGTGTTTGCTGC CGGTTATTGGGTGCATACTTTTGATAAGTTGCTTCCTGCTTCCGTATATGGAAAAGACCATCCGGAATATTATTCTTATT TTAAAGGCAAACGCCATCCCGGGAAAGCAAGCCAATGGTGTCTGAGTAACCCGGAAGTTTTTGAAATCGTGGCTCAGCGG ATTGATTCTATTTTTAAGGCAAATCCGGATAAGCATATTATGTCTGTGAGTCAGAATGATGGTAATTATACCAATTGTAC ATGTGATGCCTGCAAAGCGATAGATGATTATGAAGGAGCACTCTCAGGAAGTATCATTACTTTTTTGAATAAGCTGGCTG CCCGTTTTCCCGATAAGGAATTTTCCACGCTTGCCTATCTGTATACGATGAATCCTCCGAAACATGTGAAGCCATTGCCG AATGTGAATATCATGCTTTGTGATATAGATTGTGACCGTGAAGTGACTTTGACGGAAAATGCCTCAGGTAAAGAGTTTGT GAAAGCAATGGAAGGCTGGGCTGCCATCACTAATAATATTTTCGTGTGGGATTATGGTATTAATTTTGATAATTATCTGG CTCCGTTCCCTAATTTTCATATCTTGCAGGATAATATCCGTCTGTTCAAAAAGAATCATGCCACTATGCATTTCTCACAG ATTGCAGGAAGCAGGGGAGGAGACTTCGCTGAGTTACGTGCCTATCTGGTATCTAAGTTAATGTGGAACCCCGAAGCGAA TGTTGATTCTTTGATGCAGCATTTCCTGCATGGATACTATGGAGAGGCTGCGCCATACCTTTATCAGTATATCAAGGTGA TGGAGGGAGCGTTGATAGGCAGCGGACAAAGATTGTGGATTTATGATTCTCCTGTTTCCCATAAATACGGAATGCTGAAA CCACAACTGATGCGACGTTATAATCAACTGTTTGATGATGCAGAGAAAGCGGTGGCTGAAGATAATAAATTCCTGAAGCG TGTGCAGCGTGCCCGCTTGCCCATTCAGTATTCGGAATTGGAAATTGCCCGTACTGAGACTGGTACGGATATGAATGAGA TCAGTCCGAAATTGGCACTTTTTGAAGAACGGGTGAAAGAATTTAATGTACCGACATTGAATGAACGTTCCAATTCTCCT GTGGAATATTGCCAGTTGTATCGGGAGAGATATATGCCCCGTGCAGAAAAAAGTGTTGCGATAGGAGCGAAGGTTACTTA TCTTATTCCTCCTACCGGTAAATATGCAGAAATCGGAAAAACGGCATTAGTGGACGGACTATTCGGAGGATCTACTTTCG TTGAAAGCTGGATTGGCTGGGAAGGAACAGACGGTGCTTTTGTTATAGATTTGGGTAAAGAGAAAGAAATACATAGTATA GATACGGATTTCCTGCATCAGATCGGAGCCTGGATTCTTTTCCCTCTGAAGGTGGTTTATTCCTATTCTGAAGATGGAGA GAATTATACACATTGGGGAGCACATGATATGCCGGAAAACCGTTCGGGGAAAGTGGAGTTCCGCGGAGTGAAGACTGAAT CGGAAATGCCAGTGCATGCCCGTTATGTGAAAGTTGAGGTCACCGGTACGAAAGAATGTCCCGAATGGCATTATGGTGTA GGGCATCCTTCGTGGTTCTTTATCGACGAAGTAACAATAAAATAA
Upstream 100 bases:
>100_bases TTCTAAGTTTTCTTTGTTAATAAAACTTAGAACTGATTTTTTTCTTGAGTATCTTATATTTTTGGATTGTATTATCTAAA AACTAATTAAAGGAAATGCT
Downstream 100 bases:
>100_bases AAAAAAGTAGGGGCAAGCGTTAGTAGTTTGCCCTTCTTAGTTGTATTATATATAGATGGGTCAGAAAAATGACCCTTTCA TCTATATACTATTGAACTAT
Product: hypothetical protein
Products: NA
Alternate protein names: Glycoside Hydrolase Family; Beta-Hexosaminidase; Glycosyl Hydrolase Family; Coagulation Factor 5/8 Type Domain-Containing Protein; Alpha-1 2-Mannosidase; Coagulation Factor 5/8 Type Domain Protein
Number of amino acids: Translated: 734; Mature: 734
Protein sequence:
>734_residues MRIIRRIIFQLLCLLGACCYIPATAQVVLVDNGKTKSRIILSENDQINQISANLFQLFLQRISGCTFPIVKGQNAKKGDI IISSKTPAGVTEDGFSLSTKDGILRISGSGNGTVYGVVTLLEQYLGVDYWGENEYSFNPAKTIELPLIDKIDNPAFRYRQ TQCYAIRTDSIYKWWNRLEEPNEVFAAGYWVHTFDKLLPASVYGKDHPEYYSYFKGKRHPGKASQWCLSNPEVFEIVAQR IDSIFKANPDKHIMSVSQNDGNYTNCTCDACKAIDDYEGALSGSIITFLNKLAARFPDKEFSTLAYLYTMNPPKHVKPLP NVNIMLCDIDCDREVTLTENASGKEFVKAMEGWAAITNNIFVWDYGINFDNYLAPFPNFHILQDNIRLFKKNHATMHFSQ IAGSRGGDFAELRAYLVSKLMWNPEANVDSLMQHFLHGYYGEAAPYLYQYIKVMEGALIGSGQRLWIYDSPVSHKYGMLK PQLMRRYNQLFDDAEKAVAEDNKFLKRVQRARLPIQYSELEIARTETGTDMNEISPKLALFEERVKEFNVPTLNERSNSP VEYCQLYRERYMPRAEKSVAIGAKVTYLIPPTGKYAEIGKTALVDGLFGGSTFVESWIGWEGTDGAFVIDLGKEKEIHSI DTDFLHQIGAWILFPLKVVYSYSEDGENYTHWGAHDMPENRSGKVEFRGVKTESEMPVHARYVKVEVTGTKECPEWHYGV GHPSWFFIDEVTIK
Sequences:
>Translated_734_residues MRIIRRIIFQLLCLLGACCYIPATAQVVLVDNGKTKSRIILSENDQINQISANLFQLFLQRISGCTFPIVKGQNAKKGDI IISSKTPAGVTEDGFSLSTKDGILRISGSGNGTVYGVVTLLEQYLGVDYWGENEYSFNPAKTIELPLIDKIDNPAFRYRQ TQCYAIRTDSIYKWWNRLEEPNEVFAAGYWVHTFDKLLPASVYGKDHPEYYSYFKGKRHPGKASQWCLSNPEVFEIVAQR IDSIFKANPDKHIMSVSQNDGNYTNCTCDACKAIDDYEGALSGSIITFLNKLAARFPDKEFSTLAYLYTMNPPKHVKPLP NVNIMLCDIDCDREVTLTENASGKEFVKAMEGWAAITNNIFVWDYGINFDNYLAPFPNFHILQDNIRLFKKNHATMHFSQ IAGSRGGDFAELRAYLVSKLMWNPEANVDSLMQHFLHGYYGEAAPYLYQYIKVMEGALIGSGQRLWIYDSPVSHKYGMLK PQLMRRYNQLFDDAEKAVAEDNKFLKRVQRARLPIQYSELEIARTETGTDMNEISPKLALFEERVKEFNVPTLNERSNSP VEYCQLYRERYMPRAEKSVAIGAKVTYLIPPTGKYAEIGKTALVDGLFGGSTFVESWIGWEGTDGAFVIDLGKEKEIHSI DTDFLHQIGAWILFPLKVVYSYSEDGENYTHWGAHDMPENRSGKVEFRGVKTESEMPVHARYVKVEVTGTKECPEWHYGV GHPSWFFIDEVTIK >Mature_734_residues MRIIRRIIFQLLCLLGACCYIPATAQVVLVDNGKTKSRIILSENDQINQISANLFQLFLQRISGCTFPIVKGQNAKKGDI IISSKTPAGVTEDGFSLSTKDGILRISGSGNGTVYGVVTLLEQYLGVDYWGENEYSFNPAKTIELPLIDKIDNPAFRYRQ TQCYAIRTDSIYKWWNRLEEPNEVFAAGYWVHTFDKLLPASVYGKDHPEYYSYFKGKRHPGKASQWCLSNPEVFEIVAQR IDSIFKANPDKHIMSVSQNDGNYTNCTCDACKAIDDYEGALSGSIITFLNKLAARFPDKEFSTLAYLYTMNPPKHVKPLP NVNIMLCDIDCDREVTLTENASGKEFVKAMEGWAAITNNIFVWDYGINFDNYLAPFPNFHILQDNIRLFKKNHATMHFSQ IAGSRGGDFAELRAYLVSKLMWNPEANVDSLMQHFLHGYYGEAAPYLYQYIKVMEGALIGSGQRLWIYDSPVSHKYGMLK PQLMRRYNQLFDDAEKAVAEDNKFLKRVQRARLPIQYSELEIARTETGTDMNEISPKLALFEERVKEFNVPTLNERSNSP VEYCQLYRERYMPRAEKSVAIGAKVTYLIPPTGKYAEIGKTALVDGLFGGSTFVESWIGWEGTDGAFVIDLGKEKEIHSI DTDFLHQIGAWILFPLKVVYSYSEDGENYTHWGAHDMPENRSGKVEFRGVKTESEMPVHARYVKVEVTGTKECPEWHYGV GHPSWFFIDEVTIK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 83558; Mature: 83558
Theoretical pI: Translated: 6.43; Mature: 6.43
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRIIRRIIFQLLCLLGACCYIPATAQVVLVDNGKTKSRIILSENDQINQISANLFQLFLQ CHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCEEEEEECCCCHHHHHHHHHHHHHH RISGCTFPIVKGQNAKKGDIIISSKTPAGVTEDGFSLSTKDGILRISGSGNGTVYGVVTL HHCCCCEEEEECCCCCCCCEEEECCCCCCCCCCCCEEECCCCEEEEECCCCCEEEHHHHH LEQYLGVDYWGENEYSFNPAKTIELPLIDKIDNPAFRYRQTQCYAIRTDSIYKWWNRLEE HHHHHCCEEECCCCCCCCCCCEEEECCCCCCCCCHHHEECCEEEEEECHHHHHHHHHCCC PNEVFAAGYWVHTFDKLLPASVYGKDHPEYYSYFKGKRHPGKASQWCLSNPEVFEIVAQR CCCEEEECHHHHHHHHHCCHHHCCCCCHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHH IDSIFKANPDKHIMSVSQNDGNYTNCTCDACKAIDDYEGALSGSIITFLNKLAARFPDKE HHHHHHCCCCHHEEEEECCCCCCCCCCHHHHHHHHHHCHHHCCHHHHHHHHHHHHCCCCC FSTLAYLYTMNPPKHVKPLPNVNIMLCDIDCDREVTLTENASGKEFVKAMEGWAAITNNI CCEEEEEEECCCCCCCCCCCCCEEEEEECCCCCCEEEECCCCHHHHHHHHHHHHHHHCCE FVWDYGINFDNYLAPFPNFHILQDNIRLFKKNHATMHFSQIAGSRGGDFAELRAYLVSKL EEEEECCCCCCCCCCCCCCEEECCCHHHHHCCCCEEEHHHHCCCCCCCHHHHHHHHHHHH MWNPEANVDSLMQHFLHGYYGEAAPYLYQYIKVMEGALIGSGQRLWIYDSPVSHKYGMLK HCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCEECCCCEEEEECCCCCCCCCCCC PQLMRRYNQLFDDAEKAVAEDNKFLKRVQRARLPIQYSELEIARTETGTDMNEISPKLAL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCEEEEECCCCCCHHHHCHHHHH FEERVKEFNVPTLNERSNSPVEYCQLYRERYMPRAEKSVAIGAKVTYLIPPTGKYAEIGK HHHHHHHCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCEEECEEEEEEECCCCCHHHHCC TALVDGLFGGSTFVESWIGWEGTDGAFVIDLGKEKEIHSIDTDFLHQIGAWILFPLKVVY HHHHHHCCCCHHHHHHHCCCCCCCCEEEEECCCCCCCHHCCHHHHHHHHHHHHHHHHHHH SYSEDGENYTHWGAHDMPENRSGKVEFRGVKTESEMPVHARYVKVEVTGTKECPEWHYGV HHCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCEEEEEEEEEEECCCCCCCCCCCC GHPSWFFIDEVTIK CCCCEEEEEEEEEC >Mature Secondary Structure MRIIRRIIFQLLCLLGACCYIPATAQVVLVDNGKTKSRIILSENDQINQISANLFQLFLQ CHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCEEEEEECCCCHHHHHHHHHHHHHH RISGCTFPIVKGQNAKKGDIIISSKTPAGVTEDGFSLSTKDGILRISGSGNGTVYGVVTL HHCCCCEEEEECCCCCCCCEEEECCCCCCCCCCCCEEECCCCEEEEECCCCCEEEHHHHH LEQYLGVDYWGENEYSFNPAKTIELPLIDKIDNPAFRYRQTQCYAIRTDSIYKWWNRLEE HHHHHCCEEECCCCCCCCCCCEEEECCCCCCCCCHHHEECCEEEEEECHHHHHHHHHCCC PNEVFAAGYWVHTFDKLLPASVYGKDHPEYYSYFKGKRHPGKASQWCLSNPEVFEIVAQR CCCEEEECHHHHHHHHHCCHHHCCCCCHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHH IDSIFKANPDKHIMSVSQNDGNYTNCTCDACKAIDDYEGALSGSIITFLNKLAARFPDKE HHHHHHCCCCHHEEEEECCCCCCCCCCHHHHHHHHHHCHHHCCHHHHHHHHHHHHCCCCC FSTLAYLYTMNPPKHVKPLPNVNIMLCDIDCDREVTLTENASGKEFVKAMEGWAAITNNI CCEEEEEEECCCCCCCCCCCCCEEEEEECCCCCCEEEECCCCHHHHHHHHHHHHHHHCCE FVWDYGINFDNYLAPFPNFHILQDNIRLFKKNHATMHFSQIAGSRGGDFAELRAYLVSKL EEEEECCCCCCCCCCCCCCEEECCCHHHHHCCCCEEEHHHHCCCCCCCHHHHHHHHHHHH MWNPEANVDSLMQHFLHGYYGEAAPYLYQYIKVMEGALIGSGQRLWIYDSPVSHKYGMLK HCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCEECCCCEEEEECCCCCCCCCCCC PQLMRRYNQLFDDAEKAVAEDNKFLKRVQRARLPIQYSELEIARTETGTDMNEISPKLAL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCEEEEECCCCCCHHHHCHHHHH FEERVKEFNVPTLNERSNSPVEYCQLYRERYMPRAEKSVAIGAKVTYLIPPTGKYAEIGK HHHHHHHCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCEEECEEEEEEECCCCCHHHHCC TALVDGLFGGSTFVESWIGWEGTDGAFVIDLGKEKEIHSIDTDFLHQIGAWILFPLKVVY HHHHHHCCCCHHHHHHHCCCCCCCCEEEEECCCCCCCHHCCHHHHHHHHHHHHHHHHHHH SYSEDGENYTHWGAHDMPENRSGKVEFRGVKTESEMPVHARYVKVEVTGTKECPEWHYGV HHCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCEEEEEEEEEEECCCCCCCCCCCC GHPSWFFIDEVTIK CCCCEEEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA