Definition Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome.
Accession NC_004663
Length 6,260,361

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The map label for this gene is 29346438

Identifier: 29346438

GI number: 29346438

Start: 1291332

End: 1293506

Strand: Reverse

Name: 29346438

Synonym: BT_1028

Alternate gene names: NA

Gene position: 1293506-1291332 (Counterclockwise)

Preceding gene: 29346439

Following gene: 29346437

Centisome position: 20.66

GC content: 43.82

Gene sequence:

>2175_bases
ATGGTGACAGGACTAATCTGTTTTACTGGATGCAGCGATGATTTTCTGAAAGACAAGAAAGTATATGGAAGCTATGACGC
TTCGGTTGTGTACGAAAATTATGAAACAGCCAAAAGTCGTGTGGACTTTTTATATCAGTCTTTATTGCCTAGTTCTACCG
GAGGTTCCAATGCTTTGACCGATATAACCAGTGCGGGTATTGATGACGATTTTTCCAAATGTACGGAGGAATATGGAGAC
TACTCTATTTTCAATGATCCTACGGCATCTCTTACTATTCAGACTGTTCCCGATTATTTTTATGTAATCAACAGTGAAAG
AAGTCCTTGGGGACGTATCCGCGAATGTAATAATGTGATTGAAGGTGTGACGGGAAGTGCGACTCTTTCGCAGACAGAGA
AAGAACAATTACTCGGACAAGCTTACTTTTTTCGTGCATGGCGTTATTATCTGTTGGTGAAAATGTATGGTGGTGTTCCC
ATTGTAGACCACGTCCAGAATCCGGTGATAGGTGATGGTAATGGTGAGAATCTGGTCATTCCTCGTTCCTCGACTAAGGC
TTGTATAGACTTTATATGCGATGACTTGGAACTGGCAGCCAGCTATCTTCCTGCACGTTGGCAGAATGAAGGGCAGGATT
ACGGACGCATAACCGCCGGTGCAGCACTTGCTCTAAAAGGTCGTACATTGTTGCTTTATGCTAGTCCACTTTTTAACCGT
GCCGATGACGCATCTCGTTGGAAAGATGCTTACGACGCCAATTTTGCTGCCATCACTAAACTGAATGAAGGTAACTTCGG
ACTTGCTTATGAAGGCAATGGCGGAGAAGACAATGCCAAGAATTGGGCCAGAATGTTCGCCACTTATACAGGTGGAAGCG
AAGCCGTATTTGTTACTTTATATAATAATGTGTCTCCTATTGCTTCACAAAACATCAACCGATACAACTTGTGGGAGCAG
GGAATCCGACCAGGAAATATAAACGGAGGCGGAGGAAAGACTCCTACAGCGGAAATAATAGACATCTTCCCGATGATTGA
CGGTAAGAAACCGATGGAATCAGGAGTTCATTATGACCCTAAAAAGTTCTTTCTAAATCGTGACCCGCGTTTCTACCGTA
CATTTGCATTTCCGGGGGTAGAGTGGAAATTCAACAGTGGCAATGTCGATTTTTCAGGAGCAACGATGTCTGGTTTATGC
CCAACCCGTTATACCAGTGGTGCGAACTATGAACTTTGGAATTATTGTTGGTATACTACGGCTGATGAGCGTAATAATCC
GAGTAGAAGCGGTTTTGCAGCCGATATGCTGGGCACTAAGAATAGAGGAGTCTATGTTCGTAAACGTTCGGATGATTTTG
ATTTGGGCACTAGTCTTTATGTGTTTACTGATAACAGCAGTGGTGATCAGCAGGGATTCAGACGATCGGCAGCTCCTTAC
ATGGAGATACGGTATGCGGAAGTATTGCTGAATCTGGCAGAATCAGCTTGTGGTGCGGGCGGCACTTATCATGCGGAAGG
GGTCAAGGCGCTGAAAGCCGTACGTGGCAGAGTAGGCTATACGAGTGCAAATAATTATGGCCTGGATGCGGCGATTGAAA
CTGACCGTGCTAAATTGTTTGAAGCTATATTGTATGAACGTCAGGTAGAGTTGGCTTTTGAAGGTAAACGTGCGTATGAT
ATGCGTCGTTGGATGCTATTTGACGGAGGTGTAGGACAAGGTGCTTTGAATGCAAGTTGGGCATTGAGTGGCTTTGGAGG
TAATACTTGTACTTATTTGGGTGTGACTCCGATGAATGAACGTGGTAAGAGATATCGCATAGAAATCAATGTTGAAGGTA
CCGGGTCTGCAAATAATGACAGTGATCCGATTAAAAACGTAGAGCGACCAGCAGCACTGACATTGAATGAGAAGATTGCT
ACGGAAGCAGACGGAGAAACGATTCTTGATCCGGCTGTGTCAAGTATATGTACATTCTATGATACCTATTTCTCACGTAA
AGATATCAGTCTTGATGGTAATGTGCTGGACATTAATCCTTATTTCCAACCCAGATATTATTTCTTTGGATTGCGTCAAA
GTGCACAGCAAACTAATGCGACATTGTATCAGACCATTGGTTGGGAAGATTATGCTCACGGTGGTATGGGTACTTTCGAC
CCATTGGCAGAATAA

Upstream 100 bases:

>100_bases
ATCCTAATTTGCGTAAAGTAACTTTAGGTGTTAATGTCTCATTCTAATATCAAAGAAGATTATGAAAGAAAAGATAAATA
AAATATGTTTGACAGCATCG

Downstream 100 bases:

>100_bases
AAGATTTTTCTGATTCCCGGAAAAAAGTAATTTAATATAAAAAGGTGGCCTCAAGGCACTTTCCTTTTAATAGGAAAAGT
GTCTTGAGGCCTTTTTTTGC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 724; Mature: 724

Protein sequence:

>724_residues
MVTGLICFTGCSDDFLKDKKVYGSYDASVVYENYETAKSRVDFLYQSLLPSSTGGSNALTDITSAGIDDDFSKCTEEYGD
YSIFNDPTASLTIQTVPDYFYVINSERSPWGRIRECNNVIEGVTGSATLSQTEKEQLLGQAYFFRAWRYYLLVKMYGGVP
IVDHVQNPVIGDGNGENLVIPRSSTKACIDFICDDLELAASYLPARWQNEGQDYGRITAGAALALKGRTLLLYASPLFNR
ADDASRWKDAYDANFAAITKLNEGNFGLAYEGNGGEDNAKNWARMFATYTGGSEAVFVTLYNNVSPIASQNINRYNLWEQ
GIRPGNINGGGGKTPTAEIIDIFPMIDGKKPMESGVHYDPKKFFLNRDPRFYRTFAFPGVEWKFNSGNVDFSGATMSGLC
PTRYTSGANYELWNYCWYTTADERNNPSRSGFAADMLGTKNRGVYVRKRSDDFDLGTSLYVFTDNSSGDQQGFRRSAAPY
MEIRYAEVLLNLAESACGAGGTYHAEGVKALKAVRGRVGYTSANNYGLDAAIETDRAKLFEAILYERQVELAFEGKRAYD
MRRWMLFDGGVGQGALNASWALSGFGGNTCTYLGVTPMNERGKRYRIEINVEGTGSANNDSDPIKNVERPAALTLNEKIA
TEADGETILDPAVSSICTFYDTYFSRKDISLDGNVLDINPYFQPRYYFFGLRQSAQQTNATLYQTIGWEDYAHGGMGTFD
PLAE

Sequences:

>Translated_724_residues
MVTGLICFTGCSDDFLKDKKVYGSYDASVVYENYETAKSRVDFLYQSLLPSSTGGSNALTDITSAGIDDDFSKCTEEYGD
YSIFNDPTASLTIQTVPDYFYVINSERSPWGRIRECNNVIEGVTGSATLSQTEKEQLLGQAYFFRAWRYYLLVKMYGGVP
IVDHVQNPVIGDGNGENLVIPRSSTKACIDFICDDLELAASYLPARWQNEGQDYGRITAGAALALKGRTLLLYASPLFNR
ADDASRWKDAYDANFAAITKLNEGNFGLAYEGNGGEDNAKNWARMFATYTGGSEAVFVTLYNNVSPIASQNINRYNLWEQ
GIRPGNINGGGGKTPTAEIIDIFPMIDGKKPMESGVHYDPKKFFLNRDPRFYRTFAFPGVEWKFNSGNVDFSGATMSGLC
PTRYTSGANYELWNYCWYTTADERNNPSRSGFAADMLGTKNRGVYVRKRSDDFDLGTSLYVFTDNSSGDQQGFRRSAAPY
MEIRYAEVLLNLAESACGAGGTYHAEGVKALKAVRGRVGYTSANNYGLDAAIETDRAKLFEAILYERQVELAFEGKRAYD
MRRWMLFDGGVGQGALNASWALSGFGGNTCTYLGVTPMNERGKRYRIEINVEGTGSANNDSDPIKNVERPAALTLNEKIA
TEADGETILDPAVSSICTFYDTYFSRKDISLDGNVLDINPYFQPRYYFFGLRQSAQQTNATLYQTIGWEDYAHGGMGTFD
PLAE
>Mature_724_residues
MVTGLICFTGCSDDFLKDKKVYGSYDASVVYENYETAKSRVDFLYQSLLPSSTGGSNALTDITSAGIDDDFSKCTEEYGD
YSIFNDPTASLTIQTVPDYFYVINSERSPWGRIRECNNVIEGVTGSATLSQTEKEQLLGQAYFFRAWRYYLLVKMYGGVP
IVDHVQNPVIGDGNGENLVIPRSSTKACIDFICDDLELAASYLPARWQNEGQDYGRITAGAALALKGRTLLLYASPLFNR
ADDASRWKDAYDANFAAITKLNEGNFGLAYEGNGGEDNAKNWARMFATYTGGSEAVFVTLYNNVSPIASQNINRYNLWEQ
GIRPGNINGGGGKTPTAEIIDIFPMIDGKKPMESGVHYDPKKFFLNRDPRFYRTFAFPGVEWKFNSGNVDFSGATMSGLC
PTRYTSGANYELWNYCWYTTADERNNPSRSGFAADMLGTKNRGVYVRKRSDDFDLGTSLYVFTDNSSGDQQGFRRSAAPY
MEIRYAEVLLNLAESACGAGGTYHAEGVKALKAVRGRVGYTSANNYGLDAAIETDRAKLFEAILYERQVELAFEGKRAYD
MRRWMLFDGGVGQGALNASWALSGFGGNTCTYLGVTPMNERGKRYRIEINVEGTGSANNDSDPIKNVERPAALTLNEKIA
TEADGETILDPAVSSICTFYDTYFSRKDISLDGNVLDINPYFQPRYYFFGLRQSAQQTNATLYQTIGWEDYAHGGMGTFD
PLAE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 80255; Mature: 80255

Theoretical pI: Translated: 4.66; Mature: 4.66

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVTGLICFTGCSDDFLKDKKVYGSYDASVVYENYETAKSRVDFLYQSLLPSSTGGSNALT
CCEEEEEEECCCHHHHCCCHHCCCCCCEEEECCHHHHHHHHHHHHHHHCCCCCCCCCHHH
DITSAGIDDDFSKCTEEYGDYSIFNDPTASLTIQTVPDYFYVINSERSPWGRIRECNNVI
HHHHCCCCHHHHHHHHHHCCEEEECCCCCEEEEEECCCEEEEEECCCCCHHHHHHHHHHH
EGVTGSATLSQTEKEQLLGQAYFFRAWRYYLLVKMYGGVPIVDHVQNPVIGDGNGENLVI
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHCCCCEEECCCCCEEEE
PRSSTKACIDFICDDLELAASYLPARWQNEGQDYGRITAGAALALKGRTLLLYASPLFNR
ECCCHHHHHHHHHCCHHHHHHHCCCCCCCCCCCCCEEECCEEEEECCCEEEEEECCCCCC
ADDASRWKDAYDANFAAITKLNEGNFGLAYEGNGGEDNAKNWARMFATYTGGSEAVFVTL
CCCHHHHHHHHCCCEEEEEEECCCCEEEEECCCCCCCHHHHHHHHEEEECCCCCEEEEEE
YNNVSPIASQNINRYNLWEQGIRPGNINGGGGKTPTAEIIDIFPMIDGKKPMESGVHYDP
ECCCCCHHHCCCCEECHHHHCCCCCCCCCCCCCCCHHHHEEEEECCCCCCHHHCCCCCCH
KKFFLNRDPRFYRTFAFPGVEWKFNSGNVDFSGATMSGLCPTRYTSGANYELWNYCWYTT
HHHEECCCCCEEEEEECCCEEEEECCCCEEECCCCCCCCCCCCCCCCCCEEEEEEEEEEE
ADERNNPSRSGFAADMLGTKNRGVYVRKRSDDFDLGTSLYVFTDNSSGDQQGFRRSAAPY
CCCCCCCCCCCCCHHHCCCCCCCEEEEECCCCCCCCCEEEEEECCCCCHHHHHHHCCCCH
MEIRYAEVLLNLAESACGAGGTYHAEGVKALKAVRGRVGYTSANNYGLDAAIETDRAKLF
HHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCEEEEHHHHHHH
EAILYERQVELAFEGKRAYDMRRWMLFDGGVGQGALNASWALSGFGGNTCTYLGVTPMNE
HHHHHHHHEEEEECCCHHHCEEEEEEEECCCCCCCCCCCEEEECCCCCEEEEEECCCCCC
RGKRYRIEINVEGTGSANNDSDPIKNVERPAALTLNEKIATEADGETILDPAVSSICTFY
CCCEEEEEEEEEECCCCCCCCCHHHHCCCCCEEEECHHHCCCCCCCCHHHHHHHHHHHHH
DTYFSRKDISLDGNVLDINPYFQPRYYFFGLRQSAQQTNATLYQTIGWEDYAHGGMGTFD
HHHHCCCCCCCCCCEEEECCCCCCCEEEEEEHHHHHHCCCEEEEECCCCHHCCCCCCCCC
PLAE
CCCC
>Mature Secondary Structure
MVTGLICFTGCSDDFLKDKKVYGSYDASVVYENYETAKSRVDFLYQSLLPSSTGGSNALT
CCEEEEEEECCCHHHHCCCHHCCCCCCEEEECCHHHHHHHHHHHHHHHCCCCCCCCCHHH
DITSAGIDDDFSKCTEEYGDYSIFNDPTASLTIQTVPDYFYVINSERSPWGRIRECNNVI
HHHHCCCCHHHHHHHHHHCCEEEECCCCCEEEEEECCCEEEEEECCCCCHHHHHHHHHHH
EGVTGSATLSQTEKEQLLGQAYFFRAWRYYLLVKMYGGVPIVDHVQNPVIGDGNGENLVI
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHCCCCEEECCCCCEEEE
PRSSTKACIDFICDDLELAASYLPARWQNEGQDYGRITAGAALALKGRTLLLYASPLFNR
ECCCHHHHHHHHHCCHHHHHHHCCCCCCCCCCCCCEEECCEEEEECCCEEEEEECCCCCC
ADDASRWKDAYDANFAAITKLNEGNFGLAYEGNGGEDNAKNWARMFATYTGGSEAVFVTL
CCCHHHHHHHHCCCEEEEEEECCCCEEEEECCCCCCCHHHHHHHHEEEECCCCCEEEEEE
YNNVSPIASQNINRYNLWEQGIRPGNINGGGGKTPTAEIIDIFPMIDGKKPMESGVHYDP
ECCCCCHHHCCCCEECHHHHCCCCCCCCCCCCCCCHHHHEEEEECCCCCCHHHCCCCCCH
KKFFLNRDPRFYRTFAFPGVEWKFNSGNVDFSGATMSGLCPTRYTSGANYELWNYCWYTT
HHHEECCCCCEEEEEECCCEEEEECCCCEEECCCCCCCCCCCCCCCCCCEEEEEEEEEEE
ADERNNPSRSGFAADMLGTKNRGVYVRKRSDDFDLGTSLYVFTDNSSGDQQGFRRSAAPY
CCCCCCCCCCCCCHHHCCCCCCCEEEEECCCCCCCCCEEEEEECCCCCHHHHHHHCCCCH
MEIRYAEVLLNLAESACGAGGTYHAEGVKALKAVRGRVGYTSANNYGLDAAIETDRAKLF
HHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCEEEEHHHHHHH
EAILYERQVELAFEGKRAYDMRRWMLFDGGVGQGALNASWALSGFGGNTCTYLGVTPMNE
HHHHHHHHEEEEECCCHHHCEEEEEEEECCCCCCCCCCCEEEECCCCCEEEEEECCCCCC
RGKRYRIEINVEGTGSANNDSDPIKNVERPAALTLNEKIATEADGETILDPAVSSICTFY
CCCEEEEEEEEEECCCCCCCCCHHHHCCCCCEEEECHHHCCCCCCCCHHHHHHHHHHHHH
DTYFSRKDISLDGNVLDINPYFQPRYYFFGLRQSAQQTNATLYQTIGWEDYAHGGMGTFD
HHHHCCCCCCCCCCEEEECCCCCCCEEEEEEHHHHHHCCCEEEEECCCCHHCCCCCCCCC
PLAE
CCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA