Definition Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome.
Accession NC_004663
Length 6,260,361

Click here to switch to the map view.

The map label for this gene is 29346436

Identifier: 29346436

GI number: 29346436

Start: 1289238

End: 1290683

Strand: Reverse

Name: 29346436

Synonym: BT_1026

Alternate gene names: NA

Gene position: 1290683-1289238 (Counterclockwise)

Preceding gene: 29346437

Following gene: 29346435

Centisome position: 20.62

GC content: 32.5

Gene sequence:

>1446_bases
ATGAAAAGTAATCGTTTATTTTTACGAAGAAGAACACGTGGACTGTTATTCGCTACGTTATTATTTCTTTTAAGTAGCTG
TACCATAGGGTATCACGAAGACGAATCTTTTGAGTCGGATGTGAAAAATGCTACACTGGAATCTCCCCAATTGGAGAATG
TAAAAGTGGAACTTGATGCCACAGGAGAAAATGCAACTATTGAATGGCCTGTAGTGCATGGAGCAGAAGGTTATGAGTTT
TCTTGGTATGTAGTTGATGATCCTGAAAATCCGATAGCTGTAGTTGAAGGAGAGTTTATCGATGGTTGTAGCGTTGAATT
GGAAGTAGAAGAAGATACAAAATATAAATTCTTAATTAAAACCATTGGAAATAAACAGTTTAATAACAAAGATGCAGAAA
AAGCCTGTGAAATAAGTTTTTCAACTTTACTTGAAACATATGCATCCATTCCTAGTGGAGTAGATTTGACTCAATGGTTT
ATTGATAATCCGCTTCCAGAGACTGATATGGAACCTAATGAAGATGGCACTTTAAAAGAGTTGGCATATGAATTAGAGGC
TAACGGTGAATATACTATATCAGGTCCAATAGATTTTGGAGCACGTAAAGTTACAATTCGTGGAAATAAAATTAATCATT
CGAAAATTACATTTGGTCAAAGTGGTAGAATATTAACACAGAATGGTTTGAAGATAAAGTTTATGGATTTCTATTGTAAT
GCAATGGAGAAAGGTTCTTCTGATGCTTCATTAATTGGATTAAGTAAGACTCCAAATGAACAATTAAAAGTATCTTCTGG
AGAATACGTTATTAAAGATCCCATCGTTATTCAGTTTTGTAATGTATATGACCTTAATAGGCATTTATTATATGATTCAG
GGAAAAAATATTGTGTGGAAAACTTTACAGTAAAAGCTTCTTTTATTAGATGTAATCAGTCTAATACGATTGTGTATTTT
AATAAAGGTAGTTTTATTAATATAACATTTAAAGAGAGTACTCTTTGCAGTACTGTACAGAATGGAAGTTATTTTGCACA
GGTAAATGGTAACAGACCTAACAAGATTACTGGATATTCAAATGGAACTTTTAATTTTTATAATTGTACAGTATACAATC
TTGCTTATAGCAAAGACTTTACTAATTGGAATAGCTATAGAGGACAAGCATGCTTAACACTAAATTTCTCCAGAACTATT
TTTGTAGATTGTGGTAAAGGAGATATGACGAATAAAATAATGGGTAATGCAAATATGTCTAGAAATTTTGAATATAATAC
TTATTGGTATAATGGTAGTCAAAGTAATGATAAATATGATACAAATACTCTTGATACAGATCCTGGCTTCATTAATGCTG
CGAATGGTGATTTTACTGTAACTGGAGCAAGCCAGCTTGAAAAGAGAACTGGTGATCCACGGTGGCTTCCACTTGTTGAA
GAGTAA

Upstream 100 bases:

>100_bases
CTGCATAAATGTGAATGAAATGTTTAACGGACTATTGTATATAATATTCAACTTAAATATTGATAACATAAGAACGTATT
GTTTAATTTAAATTTAATGT

Downstream 100 bases:

>100_bases
GTAAAGTAGTATGATAATAAAAATTAAATGCAATGAATAAGAAAAATATTATTCTCAGTTTATTCATCGGTACACTGTTG
ACTTTTGTTATGCCATTGTG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 481; Mature: 481

Protein sequence:

>481_residues
MKSNRLFLRRRTRGLLFATLLFLLSSCTIGYHEDESFESDVKNATLESPQLENVKVELDATGENATIEWPVVHGAEGYEF
SWYVVDDPENPIAVVEGEFIDGCSVELEVEEDTKYKFLIKTIGNKQFNNKDAEKACEISFSTLLETYASIPSGVDLTQWF
IDNPLPETDMEPNEDGTLKELAYELEANGEYTISGPIDFGARKVTIRGNKINHSKITFGQSGRILTQNGLKIKFMDFYCN
AMEKGSSDASLIGLSKTPNEQLKVSSGEYVIKDPIVIQFCNVYDLNRHLLYDSGKKYCVENFTVKASFIRCNQSNTIVYF
NKGSFINITFKESTLCSTVQNGSYFAQVNGNRPNKITGYSNGTFNFYNCTVYNLAYSKDFTNWNSYRGQACLTLNFSRTI
FVDCGKGDMTNKIMGNANMSRNFEYNTYWYNGSQSNDKYDTNTLDTDPGFINAANGDFTVTGASQLEKRTGDPRWLPLVE
E

Sequences:

>Translated_481_residues
MKSNRLFLRRRTRGLLFATLLFLLSSCTIGYHEDESFESDVKNATLESPQLENVKVELDATGENATIEWPVVHGAEGYEF
SWYVVDDPENPIAVVEGEFIDGCSVELEVEEDTKYKFLIKTIGNKQFNNKDAEKACEISFSTLLETYASIPSGVDLTQWF
IDNPLPETDMEPNEDGTLKELAYELEANGEYTISGPIDFGARKVTIRGNKINHSKITFGQSGRILTQNGLKIKFMDFYCN
AMEKGSSDASLIGLSKTPNEQLKVSSGEYVIKDPIVIQFCNVYDLNRHLLYDSGKKYCVENFTVKASFIRCNQSNTIVYF
NKGSFINITFKESTLCSTVQNGSYFAQVNGNRPNKITGYSNGTFNFYNCTVYNLAYSKDFTNWNSYRGQACLTLNFSRTI
FVDCGKGDMTNKIMGNANMSRNFEYNTYWYNGSQSNDKYDTNTLDTDPGFINAANGDFTVTGASQLEKRTGDPRWLPLVE
E
>Mature_481_residues
MKSNRLFLRRRTRGLLFATLLFLLSSCTIGYHEDESFESDVKNATLESPQLENVKVELDATGENATIEWPVVHGAEGYEF
SWYVVDDPENPIAVVEGEFIDGCSVELEVEEDTKYKFLIKTIGNKQFNNKDAEKACEISFSTLLETYASIPSGVDLTQWF
IDNPLPETDMEPNEDGTLKELAYELEANGEYTISGPIDFGARKVTIRGNKINHSKITFGQSGRILTQNGLKIKFMDFYCN
AMEKGSSDASLIGLSKTPNEQLKVSSGEYVIKDPIVIQFCNVYDLNRHLLYDSGKKYCVENFTVKASFIRCNQSNTIVYF
NKGSFINITFKESTLCSTVQNGSYFAQVNGNRPNKITGYSNGTFNFYNCTVYNLAYSKDFTNWNSYRGQACLTLNFSRTI
FVDCGKGDMTNKIMGNANMSRNFEYNTYWYNGSQSNDKYDTNTLDTDPGFINAANGDFTVTGASQLEKRTGDPRWLPLVE
E

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 54257; Mature: 54257

Theoretical pI: Translated: 4.61; Mature: 4.61

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKSNRLFLRRRTRGLLFATLLFLLSSCTIGYHEDESFESDVKNATLESPQLENVKVELDA
CCCCEEEEEEHHCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHCCCCCCCCCCEEEEEEE
TGENATIEWPVVHGAEGYEFSWYVVDDPENPIAVVEGEFIDGCSVELEVEEDTKYKFLIK
CCCCCEEEEEEEECCCCCEEEEEEEECCCCCEEEEECCCCCCCEEEEEECCCCCEEEEEE
TIGNKQFNNKDAEKACEISFSTLLETYASIPSGVDLTQWFIDNPLPETDMEPNEDGTLKE
ECCCCCCCCCCHHHHHHEEHHHHHHHHHCCCCCCCHHHHHHCCCCCCCCCCCCCCCCHHH
LAYELEANGEYTISGPIDFGARKVTIRGNKINHSKITFGQSGRILTQNGLKIKFMDFYCN
HEEEEECCCCEEEECCCCCCEEEEEEECCEECCCEEEECCCCCEEECCCCEEEEEHEEHH
AMEKGSSDASLIGLSKTPNEQLKVSSGEYVIKDPIVIQFCNVYDLNRHLLYDSGKKYCVE
HHHCCCCCCEEEEECCCCCCCEEECCCCEEEECCEEEEEECEEECCCEEEECCCCEEEEE
NFTVKASFIRCNQSNTIVYFNKGSFINITFKESTLCSTVQNGSYFAQVNGNRPNKITGYS
CEEEEEEEEEECCCCEEEEECCCCEEEEEEECCCEEHHCCCCEEEEEECCCCCCEEECCC
NGTFNFYNCTVYNLAYSKDFTNWNSYRGQACLTLNFSRTIFVDCGKGDMTNKIMGNANMS
CCEEEEEEEEEEEEEECCCCCCCCCCCCCEEEEEECCEEEEEECCCCCCCCEEECCCCCC
RNFEYNTYWYNGSQSNDKYDTNTLDTDPGFINAANGDFTVTGASQLEKRTGDPRWLPLVE
CCEEEEEEEECCCCCCCCCCCCCCCCCCCEEECCCCCEEEECHHHHHHHCCCCCEEEEEC
E
C
>Mature Secondary Structure
MKSNRLFLRRRTRGLLFATLLFLLSSCTIGYHEDESFESDVKNATLESPQLENVKVELDA
CCCCEEEEEEHHCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHCCCCCCCCCCEEEEEEE
TGENATIEWPVVHGAEGYEFSWYVVDDPENPIAVVEGEFIDGCSVELEVEEDTKYKFLIK
CCCCCEEEEEEEECCCCCEEEEEEEECCCCCEEEEECCCCCCCEEEEEECCCCCEEEEEE
TIGNKQFNNKDAEKACEISFSTLLETYASIPSGVDLTQWFIDNPLPETDMEPNEDGTLKE
ECCCCCCCCCCHHHHHHEEHHHHHHHHHCCCCCCCHHHHHHCCCCCCCCCCCCCCCCHHH
LAYELEANGEYTISGPIDFGARKVTIRGNKINHSKITFGQSGRILTQNGLKIKFMDFYCN
HEEEEECCCCEEEECCCCCCEEEEEEECCEECCCEEEECCCCCEEECCCCEEEEEHEEHH
AMEKGSSDASLIGLSKTPNEQLKVSSGEYVIKDPIVIQFCNVYDLNRHLLYDSGKKYCVE
HHHCCCCCCEEEEECCCCCCCEEECCCCEEEECCEEEEEECEEECCCEEEECCCCEEEEE
NFTVKASFIRCNQSNTIVYFNKGSFINITFKESTLCSTVQNGSYFAQVNGNRPNKITGYS
CEEEEEEEEEECCCCEEEEECCCCEEEEEEECCCEEHHCCCCEEEEEECCCCCCEEECCC
NGTFNFYNCTVYNLAYSKDFTNWNSYRGQACLTLNFSRTIFVDCGKGDMTNKIMGNANMS
CCEEEEEEEEEEEEEECCCCCCCCCCCCCEEEEEECCEEEEEECCCCCCCCEEECCCCCC
RNFEYNTYWYNGSQSNDKYDTNTLDTDPGFINAANGDFTVTGASQLEKRTGDPRWLPLVE
CCEEEEEEEECCCCCCCCCCCCCCCCCCCEEECCCCCEEEECHHHHHHHCCCCCEEEEEC
E
C

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA