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The map label for this gene is alpA [C]

Identifier: 29144768

GI number: 29144768

Start: 4673738

End: 4674061

Strand: Direct

Name: alpA [C]

Synonym: t4525

Alternate gene names: 29144768

Gene position: 4673738-4674061 (Clockwise)

Preceding gene: 29144761

Following gene: 29144769

Centisome position: 97.53

GC content: 54.01

Gene sequence:

>324_bases
ATGCACACCGCTTTTTCTTCCCCGTCTTCTGCCCCTGCCGCGCCGCTGATGCCGGTTTCTGATACCGTTCATGAGCGTTT
TATTCGTCTGCCCGAAGTGATGCATCTGTGCGGTCTGTCCCGCTCGACCATTTACGACCTCATCAGCCGGGAAGCCTTCC
CGAAACAAATCTCCCTCGGCGGAAAAAACGTGGCGTGGGCGCAGTCTGAAATCACGGCATGGATGACTGACCGCATCGCA
ACCGGGGTTATGACGCATGATGATGACCATTCAGCAAACAGCCCCTTTTTCTGGCTTGCTTCTTTTTATCGTTTCCAGGT
ATAG

Upstream 100 bases:

>100_bases
AAATGACTTGTTGCCCTGCGTAAAAATATTCACAAAATAGAGAGCTACCCGAAGCCGGACGGACACGACCGGCACTGTAT
GGACTTTGTGAGGTAGCCCG

Downstream 100 bases:

>100_bases
TTTTCCCGCTGTCGCAAAATCGGCAGCCGGGCGTGGAAACCCGAGTAATCTAACGGCGACACCTGACGCGCCATGCGTCT
TTTTTTGTGTCTATGCCCTC

Product: phage DNA binding protein

Products: NA

Alternate protein names: Phage Transcriptional Regulator AlpA-Family; Prophage Regulatory Protein; Prophage CP4-57 Regulatory

Number of amino acids: Translated: 107; Mature: 107

Protein sequence:

>107_residues
MHTAFSSPSSAPAAPLMPVSDTVHERFIRLPEVMHLCGLSRSTIYDLISREAFPKQISLGGKNVAWAQSEITAWMTDRIA
TGVMTHDDDHSANSPFFWLASFYRFQV

Sequences:

>Translated_107_residues
MHTAFSSPSSAPAAPLMPVSDTVHERFIRLPEVMHLCGLSRSTIYDLISREAFPKQISLGGKNVAWAQSEITAWMTDRIA
TGVMTHDDDHSANSPFFWLASFYRFQV
>Mature_107_residues
MHTAFSSPSSAPAAPLMPVSDTVHERFIRLPEVMHLCGLSRSTIYDLISREAFPKQISLGGKNVAWAQSEITAWMTDRIA
TGVMTHDDDHSANSPFFWLASFYRFQV

Specific function: Positive Regulator Of The Expression Of The Slpa Gene. [C]

COG id: COG3311

COG function: function code K; Predicted transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 11987; Mature: 11987

Theoretical pI: Translated: 6.67; Mature: 6.67

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
4.7 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
4.7 %Met     (Mature Protein)
5.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHTAFSSPSSAPAAPLMPVSDTVHERFIRLPEVMHLCGLSRSTIYDLISREAFPKQISLG
CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCEECCC
GKNVAWAQSEITAWMTDRIATGVMTHDDDHSANSPFFWLASFYRFQV
CCCCEEHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHCC
>Mature Secondary Structure
MHTAFSSPSSAPAAPLMPVSDTVHERFIRLPEVMHLCGLSRSTIYDLISREAFPKQISLG
CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCEECCC
GKNVAWAQSEITAWMTDRIATGVMTHDDDHSANSPFFWLASFYRFQV
CCCCEEHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA