| Definition | Salmonella enterica subsp. enterica serovar Typhi str. Ty2 chromosome, complete genome. |
|---|---|
| Accession | NC_004631 |
| Length | 4,791,961 |
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The map label for this gene is 29144696
Identifier: 29144696
GI number: 29144696
Start: 4596189
End: 4597577
Strand: Direct
Name: 29144696
Synonym: t4451
Alternate gene names: NA
Gene position: 4596189-4597577 (Clockwise)
Preceding gene: 29144695
Following gene: 29144700
Centisome position: 95.91
GC content: 46.22
Gene sequence:
>1389_bases ATGTTGAGAATAAAACAGTTCTGTTTATCGATTTTATTAATGCTGGCACCAGTGTTAGCTCTGGCCTGTTCCGACATTCC ATATGCTTTGTTTCACTATCAGCCGTGGGGGCAGGGAACGAAATATGTAGTTGAAGAAGATTATGGTTATAGTATTAATT TTAAAGATATTGAAATTCGAGAGGTAAAATTTAGTCAACTACGGCACGTTCCTGACCGCATTGTTAATGAATATAATGAC CGTGGAAAAATGAGTAATGATTTTGTTCATGTCGCCGCTTTTTCATCGCTAATAAAAAATGATTTCTGGCAGTTTTATTG GCTAACCGACGGCCAGCATATTTTATGGGCTGGGAAAATCGTACAAAATCCACCGGGTAAGCCGCCAGTGGATGCAGCGA CTTTTCGGGCGTATGGACGCTTTGCCGCTGATAAAGATAGTCTTTACTTCGACGGCGAGCGCACAGATGATAATCATGGT GAAAAAAGGGTCGATATGGATTCGTTGCAGCAGGTCGGCGGCAACATCAAATTACGCGACTCCGGCGATGTGCTTAAAGA CAGGCGCAACCTCTACTTTCAGGGACGCTGGCTGGCTAGTGCGCAGGGATATTCCATCCTGGGCGTTAAATCCTGGGAGC AGCGTAATATTCTGTTTTCGCCGACCAGCTGCGATACTACATCTAATCCTGGCCCGTGGGACACTATTCTGCGTACCGCC ACGCAGGTTTTTGTTAATGGTGTGGCAATTGATGCCGATCCGAACTCTTTTCATGTTGTGCGCTGGGTCGCTGGCGTGCA GTTACTCTATCGCGACAAAGCAGGCGTAAAACGCTATTACTTCGGCAAAGACTGTCTCAATACGTTTAATGTACAGCGGG ATAAGGTGACATGGATGACGCGAGAGGCATCGCGCCGAGGCGATGACTGCCGAATAGCGACTATTCCCAATGTTGATCCA GAATATTTCCATCCCATTCATTACAATTGGACGGTAGCACAGTACAAAGATCTATTGTACCAGGTGAAGTATGTCTCTCC GGTCGACAGGGTATTAACCATCACCCGCTTGCCTGATCCGCAGGTACAGCTGAAAGCTGGCGCTAATTTGGTGGGTAAAC AGATCTATTTTATCGGCGATGGGGGAGTGCAGATTATCGACCTTATTGGACCATTGGTGTGGTTTAAAAGTCCCGATGGT TCATTTTCTGATGTTTTTGCTCATGACGATCGTTATCTCTATTTCTTCGGTGATACGCTGGTAGATAGCGGGCAACGGCG TAACGTAACGCGGACGCTGGATACTGCGCATATCGACAAGAGCGGTTATTATCTGGTCACTGAGGAGGGGAAATATGAGG TTATTAATAATGCATTCACCTCTCGCTAA
Upstream 100 bases:
>100_bases GCTATAACCCGATATTAACAGAGTGGACGACGGTATCACCAGCGCCCACTGACGTTATCTCTTTGCTTCCCTCTGATTAC CACTAGCGCAGGATGGCGCA
Downstream 100 bases:
>100_bases AAAGCGTTAGTCGATTCAGAATAAACGATCCTGTCTATGCGTTCAGGATCGTTTATTGGCGATGGATTATTCCCCGGCCA GCGCGCGTGGGAACAGCACG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 462; Mature: 462
Protein sequence:
>462_residues MLRIKQFCLSILLMLAPVLALACSDIPYALFHYQPWGQGTKYVVEEDYGYSINFKDIEIREVKFSQLRHVPDRIVNEYND RGKMSNDFVHVAAFSSLIKNDFWQFYWLTDGQHILWAGKIVQNPPGKPPVDAATFRAYGRFAADKDSLYFDGERTDDNHG EKRVDMDSLQQVGGNIKLRDSGDVLKDRRNLYFQGRWLASAQGYSILGVKSWEQRNILFSPTSCDTTSNPGPWDTILRTA TQVFVNGVAIDADPNSFHVVRWVAGVQLLYRDKAGVKRYYFGKDCLNTFNVQRDKVTWMTREASRRGDDCRIATIPNVDP EYFHPIHYNWTVAQYKDLLYQVKYVSPVDRVLTITRLPDPQVQLKAGANLVGKQIYFIGDGGVQIIDLIGPLVWFKSPDG SFSDVFAHDDRYLYFFGDTLVDSGQRRNVTRTLDTAHIDKSGYYLVTEEGKYEVINNAFTSR
Sequences:
>Translated_462_residues MLRIKQFCLSILLMLAPVLALACSDIPYALFHYQPWGQGTKYVVEEDYGYSINFKDIEIREVKFSQLRHVPDRIVNEYND RGKMSNDFVHVAAFSSLIKNDFWQFYWLTDGQHILWAGKIVQNPPGKPPVDAATFRAYGRFAADKDSLYFDGERTDDNHG EKRVDMDSLQQVGGNIKLRDSGDVLKDRRNLYFQGRWLASAQGYSILGVKSWEQRNILFSPTSCDTTSNPGPWDTILRTA TQVFVNGVAIDADPNSFHVVRWVAGVQLLYRDKAGVKRYYFGKDCLNTFNVQRDKVTWMTREASRRGDDCRIATIPNVDP EYFHPIHYNWTVAQYKDLLYQVKYVSPVDRVLTITRLPDPQVQLKAGANLVGKQIYFIGDGGVQIIDLIGPLVWFKSPDG SFSDVFAHDDRYLYFFGDTLVDSGQRRNVTRTLDTAHIDKSGYYLVTEEGKYEVINNAFTSR >Mature_462_residues MLRIKQFCLSILLMLAPVLALACSDIPYALFHYQPWGQGTKYVVEEDYGYSINFKDIEIREVKFSQLRHVPDRIVNEYND RGKMSNDFVHVAAFSSLIKNDFWQFYWLTDGQHILWAGKIVQNPPGKPPVDAATFRAYGRFAADKDSLYFDGERTDDNHG EKRVDMDSLQQVGGNIKLRDSGDVLKDRRNLYFQGRWLASAQGYSILGVKSWEQRNILFSPTSCDTTSNPGPWDTILRTA TQVFVNGVAIDADPNSFHVVRWVAGVQLLYRDKAGVKRYYFGKDCLNTFNVQRDKVTWMTREASRRGDDCRIATIPNVDP EYFHPIHYNWTVAQYKDLLYQVKYVSPVDRVLTITRLPDPQVQLKAGANLVGKQIYFIGDGGVQIIDLIGPLVWFKSPDG SFSDVFAHDDRYLYFFGDTLVDSGQRRNVTRTLDTAHIDKSGYYLVTEEGKYEVINNAFTSR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 52986; Mature: 52986
Theoretical pI: Translated: 7.30; Mature: 7.30
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLRIKQFCLSILLMLAPVLALACSDIPYALFHYQPWGQGTKYVVEEDYGYSINFKDIEIR CCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCEEEEECCCCCEEECCCEEEE EVKFSQLRHVPDRIVNEYNDRGKMSNDFVHVAAFSSLIKNDFWQFYWLTDGQHILWAGKI ECHHHHHHCCHHHHHHHHCCCCCCCCCEEHHHHHHHHHHCCCEEEEEEECCCEEEEECEE VQNPPGKPPVDAATFRAYGRFAADKDSLYFDGERTDDNHGEKRVDMDSLQQVGGNIKLRD ECCCCCCCCCCHHHHHHHHCCCCCCCCEEECCCCCCCCCCCCCCCHHHHHHHCCCEEEEC SGDVLKDRRNLYFQGRWLASAQGYSILGVKSWEQRNILFSPTSCDTTSNPGPWDTILRTA CCCHHHHCCCEEEEEEEEECCCCEEEEEECCCCCCCEEECCCCCCCCCCCCCHHHHHHHH TQVFVNGVAIDADPNSFHVVRWVAGVQLLYRDKAGVKRYYFGKDCLNTFNVQRDKVTWMT HHHHHCCEEEECCCCCEEEEEHHHHHHEEEECCCCCEEEECCHHHHHHCCCCCCEEEEEE REASRRGDDCRIATIPNVDPEYFHPIHYNWTVAQYKDLLYQVKYVSPVDRVLTITRLPDP HHHHCCCCCEEEEECCCCCHHHCCCEEEEEEHHHHHHHHHEEECCCCHHHEEEEEECCCC QVQLKAGANLVGKQIYFIGDGGVQIIDLIGPLVWFKSPDGSFSDVFAHDDRYLYFFGDTL CEEEECCCCEECCEEEEEECCCEEHHHHHHHHEEEECCCCCCHHHEECCCCEEEEECCHH VDSGQRRNVTRTLDTAHIDKSGYYLVTEEGKYEVINNAFTSR HCCCCCCCCEEEEHHEEECCCCEEEEECCCCEEEECHHHCCC >Mature Secondary Structure MLRIKQFCLSILLMLAPVLALACSDIPYALFHYQPWGQGTKYVVEEDYGYSINFKDIEIR CCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCEEEEECCCCCEEECCCEEEE EVKFSQLRHVPDRIVNEYNDRGKMSNDFVHVAAFSSLIKNDFWQFYWLTDGQHILWAGKI ECHHHHHHCCHHHHHHHHCCCCCCCCCEEHHHHHHHHHHCCCEEEEEEECCCEEEEECEE VQNPPGKPPVDAATFRAYGRFAADKDSLYFDGERTDDNHGEKRVDMDSLQQVGGNIKLRD ECCCCCCCCCCHHHHHHHHCCCCCCCCEEECCCCCCCCCCCCCCCHHHHHHHCCCEEEEC SGDVLKDRRNLYFQGRWLASAQGYSILGVKSWEQRNILFSPTSCDTTSNPGPWDTILRTA CCCHHHHCCCEEEEEEEEECCCCEEEEEECCCCCCCEEECCCCCCCCCCCCCHHHHHHHH TQVFVNGVAIDADPNSFHVVRWVAGVQLLYRDKAGVKRYYFGKDCLNTFNVQRDKVTWMT HHHHHCCEEEECCCCCEEEEEHHHHHHEEEECCCCCEEEECCHHHHHHCCCCCCEEEEEE REASRRGDDCRIATIPNVDPEYFHPIHYNWTVAQYKDLLYQVKYVSPVDRVLTITRLPDP HHHHCCCCCEEEEECCCCCHHHCCCEEEEEEHHHHHHHHHEEECCCCHHHEEEEEECCCC QVQLKAGANLVGKQIYFIGDGGVQIIDLIGPLVWFKSPDGSFSDVFAHDDRYLYFFGDTL CEEEECCCCEECCEEEEEECCCEEHHHHHHHHEEEECCCCCCHHHEECCCCEEEEECCHH VDSGQRRNVTRTLDTAHIDKSGYYLVTEEGKYEVINNAFTSR HCCCCCCCCEEEEHHEEECCCCEEEEECCCCEEEECHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA