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The map label for this gene is ydeD [C]

Identifier: 29144691

GI number: 29144691

Start: 4590547

End: 4591473

Strand: Direct

Name: ydeD [C]

Synonym: t4446

Alternate gene names: 29144691

Gene position: 4590547-4591473 (Clockwise)

Preceding gene: 29144690

Following gene: 161486767

Centisome position: 95.8

GC content: 50.92

Gene sequence:

>927_bases
ATGGATACCCAACGCCAGGCCTCCCCGTTTGCCCGCAAAAACGTCGTTTATGTGTGTGCCGCATTTTGTTGCCTGCTATG
GGGCAGCGCTTATCCAGCCATCAAAAGCGGTTATGACCTCTTTCAGATAGCCACCGACGATATCCCTTCTAAAATTGTTT
TTGCTGGTTATCGTTTTTTGTTTGCGGGTGGGTTGCTACTACTGTTCGCGCTGCTTCAGCGTAAACCGATTGGTCGGTTT
CGTCCGCGCCAGTTTGCTCAGTTAACGTTACTAGGTCTGACCCAGACGTCGCTGCAATATCTCTTTTTCTATATCGGCCT
TGCGTTCACCTCCGGCGTGAAAGGCTCAATCATGAACGCGACAGGCACATTCTTCAGCGTATTGCTGGCGCACTTTATTT
ATCAGAACGACCGATTGAGCTACAACAAAACGCTCGGCTGTATTCTGGGCTTTGCGGGCGTCATGGTGGTGAACGTCAGC
AACGGCCTGGATTTCAGCTTTAATCTGCCGGGAGAAGGCTCCGTGGTGCTGGCTGCGTTTATTCTTTCTGCGGCCACATT
GTATGGCAAACGTCTCTCGCAGACGGTCGATCCGATGGTCATGACTGGCTATCAATTGGGGATTGGCGGTCTGGTACTGG
TCATTGGCGGTTACGTTTTTGGCGGTACGCTGACGATACATGGCTTCTCGTCGGTGGCGATTTTAGTCTACCTGACGCTG
CTCTCGTCGGTCGCTTTTGCGCTATGGAACATTTTACTCAAATATAATCGCGTGGGGATGATTGCGCCGTTTAACTTTCT
GATCCCGGTTTCTGGCGCGGCTCTTTCGGCTATTTTTCTCGGCGAGAATATATTGGAGTGGAAATACATGATTGCGCTGG
TGCTGGTGTGTTCGGGGATTTGGTGGGTGAATAAGGTGAAGCGGTAA

Upstream 100 bases:

>100_bases
GCGTTTTGCTTTTTTAACTCCATCGCTTTTCGACTGGCTATCTCCCCCTCTTTTCGCGATAATTAAAAATAAAACATTAT
TTTAATTTCTTGGTGAAAGA

Downstream 100 bases:

>100_bases
TGCTTCACCTGAACGAATAGGGTATAGACGGGGTAAGGCGCAGCCGGCGTTACTGTGCGCGAATAAAACTGCCGTCAGGC
TGACGCGTAAACAGCACCTG

Product: hypothetical protein

Products: NA

Alternate protein names: Exported Membrane Protein; Permease; Drug/Metabolite Exporter Family Transporter; Transporter EamA Family; Integral Membrane

Number of amino acids: Translated: 308; Mature: 308

Protein sequence:

>308_residues
MDTQRQASPFARKNVVYVCAAFCCLLWGSAYPAIKSGYDLFQIATDDIPSKIVFAGYRFLFAGGLLLLFALLQRKPIGRF
RPRQFAQLTLLGLTQTSLQYLFFYIGLAFTSGVKGSIMNATGTFFSVLLAHFIYQNDRLSYNKTLGCILGFAGVMVVNVS
NGLDFSFNLPGEGSVVLAAFILSAATLYGKRLSQTVDPMVMTGYQLGIGGLVLVIGGYVFGGTLTIHGFSSVAILVYLTL
LSSVAFALWNILLKYNRVGMIAPFNFLIPVSGAALSAIFLGENILEWKYMIALVLVCSGIWWVNKVKR

Sequences:

>Translated_308_residues
MDTQRQASPFARKNVVYVCAAFCCLLWGSAYPAIKSGYDLFQIATDDIPSKIVFAGYRFLFAGGLLLLFALLQRKPIGRF
RPRQFAQLTLLGLTQTSLQYLFFYIGLAFTSGVKGSIMNATGTFFSVLLAHFIYQNDRLSYNKTLGCILGFAGVMVVNVS
NGLDFSFNLPGEGSVVLAAFILSAATLYGKRLSQTVDPMVMTGYQLGIGGLVLVIGGYVFGGTLTIHGFSSVAILVYLTL
LSSVAFALWNILLKYNRVGMIAPFNFLIPVSGAALSAIFLGENILEWKYMIALVLVCSGIWWVNKVKR
>Mature_308_residues
MDTQRQASPFARKNVVYVCAAFCCLLWGSAYPAIKSGYDLFQIATDDIPSKIVFAGYRFLFAGGLLLLFALLQRKPIGRF
RPRQFAQLTLLGLTQTSLQYLFFYIGLAFTSGVKGSIMNATGTFFSVLLAHFIYQNDRLSYNKTLGCILGFAGVMVVNVS
NGLDFSFNLPGEGSVVLAAFILSAATLYGKRLSQTVDPMVMTGYQLGIGGLVLVIGGYVFGGTLTIHGFSSVAILVYLTL
LSSVAFALWNILLKYNRVGMIAPFNFLIPVSGAALSAIFLGENILEWKYMIALVLVCSGIWWVNKVKR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Integral Membrane Protein [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 33674; Mature: 33674

Theoretical pI: Translated: 9.86; Mature: 9.86

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDTQRQASPFARKNVVYVCAAFCCLLWGSAYPAIKSGYDLFQIATDDIPSKIVFAGYRFL
CCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHCCCCEEEEECCCCCCHHHHHHHHHH
FAGGLLLLFALLQRKPIGRFRPRQFAQLTLLGLTQTSLQYLFFYIGLAFTSGVKGSIMNA
HHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEECC
TGTFFSVLLAHFIYQNDRLSYNKTLGCILGFAGVMVVNVSNGLDFSFNLPGEGSVVLAAF
HHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHEEEEEECCCCEEEEECCCCCHHHHHHH
ILSAATLYGKRLSQTVDPMVMTGYQLGIGGLVLVIGGYVFGGTLTIHGFSSVAILVYLTL
HHHHHHHHHHHHHHHCCHHHHCCCHHCHHHHHHHHHHHHHCCEEEEECHHHHHHHHHHHH
LSSVAFALWNILLKYNRVGMIAPFNFLIPVSGAALSAIFLGENILEWKYMIALVLVCSGI
HHHHHHHHHHHHHHHCCCCEEECCCEEEECCCHHHHHHHHCCHHHHHHHHHHHHHHHCCC
WWVNKVKR
HHHHHCCC
>Mature Secondary Structure
MDTQRQASPFARKNVVYVCAAFCCLLWGSAYPAIKSGYDLFQIATDDIPSKIVFAGYRFL
CCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHCCCCEEEEECCCCCCHHHHHHHHHH
FAGGLLLLFALLQRKPIGRFRPRQFAQLTLLGLTQTSLQYLFFYIGLAFTSGVKGSIMNA
HHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEECC
TGTFFSVLLAHFIYQNDRLSYNKTLGCILGFAGVMVVNVSNGLDFSFNLPGEGSVVLAAF
HHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHEEEEEECCCCEEEEECCCCCHHHHHHH
ILSAATLYGKRLSQTVDPMVMTGYQLGIGGLVLVIGGYVFGGTLTIHGFSSVAILVYLTL
HHHHHHHHHHHHHHHCCHHHHCCCHHCHHHHHHHHHHHHHCCEEEEECHHHHHHHHHHHH
LSSVAFALWNILLKYNRVGMIAPFNFLIPVSGAALSAIFLGENILEWKYMIALVLVCSGI
HHHHHHHHHHHHHHHCCCCEEECCCEEEECCCHHHHHHHHCCHHHHHHHHHHHHHHHCCC
WWVNKVKR
HHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA