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The map label for this gene is yjfM [H]

Identifier: 29144671

GI number: 29144671

Start: 4576171

End: 4576809

Strand: Direct

Name: yjfM [H]

Synonym: t4426

Alternate gene names: 29144671

Gene position: 4576171-4576809 (Clockwise)

Preceding gene: 29144670

Following gene: 29144672

Centisome position: 95.5

GC content: 54.77

Gene sequence:

>639_bases
ATGGCAAAAAAACGAAAATCCAGAAGCACATCCGGCGTAGGCCATTCGGCAATAAGACGGATAGCCGAACCGGTCAATCC
CTTTGAGCGGCAACGAAATCGCTACACGCCAAAATACCTGACGCTGGCGATTATGGGTGGAGCGGCCTTTTTTCTCCTGA
AAGGGTACGGTGACGGCAGCAATAGTGACAACGACGGCGATGGGACGTTTTACGCCACGGTGAACGACTGTATTGACGAT
GGCAATAGCGCCAGCGTTTGCGCTGACGGCTGGAATAATGCGAAAACAGAATTTTACGCTAATGTGCCTAAGCAATTGAC
GCAGGAGAGCTGTCAGTCGCAGTTTGGCGATTGCTACTTTGATATCACCGAGCGGAGCTGGGTTCCGGTATTAAGCGGCT
TTTTACTCAGCCGCGCGATTCGTCAGAACCGTGATGAACAATACATCTATAGCAGCGGCGGTTCATCTTACGTCTCCCGT
CCCGTCTGGCGCACCACATCCGGCGATTATGCGTGGCGCAGCGGCACAGGGAAAAGCGATACCGTGACCAGCCCTGGTTA
TATCATACGGAAAGCGTCCACCGTCTCCCGCGGCGGCTATGGCCGTTCTTCCAGCGCCCGCGGGCACTGGGGAGGCTAA

Upstream 100 bases:

>100_bases
AATTATTCATCACAACGTGGCGGCGGGGCTATTTATGGGAACCGCAGCGCTGGCTGGCGGTATTTTTAACGCTGCCTGTA
TGACATGGTAACGGAAGATC

Downstream 100 bases:

>100_bases
CCATGCTACGACATAACGTACCGGTACGCCGGGATCTGGATAAGATCGCATGCGATCACGGTTTTGACTTTCATGTTATC
GATAACGAAATTTACTGGGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 212; Mature: 211

Protein sequence:

>212_residues
MAKKRKSRSTSGVGHSAIRRIAEPVNPFERQRNRYTPKYLTLAIMGGAAFFLLKGYGDGSNSDNDGDGTFYATVNDCIDD
GNSASVCADGWNNAKTEFYANVPKQLTQESCQSQFGDCYFDITERSWVPVLSGFLLSRAIRQNRDEQYIYSSGGSSYVSR
PVWRTTSGDYAWRSGTGKSDTVTSPGYIIRKASTVSRGGYGRSSSARGHWGG

Sequences:

>Translated_212_residues
MAKKRKSRSTSGVGHSAIRRIAEPVNPFERQRNRYTPKYLTLAIMGGAAFFLLKGYGDGSNSDNDGDGTFYATVNDCIDD
GNSASVCADGWNNAKTEFYANVPKQLTQESCQSQFGDCYFDITERSWVPVLSGFLLSRAIRQNRDEQYIYSSGGSSYVSR
PVWRTTSGDYAWRSGTGKSDTVTSPGYIIRKASTVSRGGYGRSSSARGHWGG
>Mature_211_residues
AKKRKSRSTSGVGHSAIRRIAEPVNPFERQRNRYTPKYLTLAIMGGAAFFLLKGYGDGSNSDNDGDGTFYATVNDCIDDG
NSASVCADGWNNAKTEFYANVPKQLTQESCQSQFGDCYFDITERSWVPVLSGFLLSRAIRQNRDEQYIYSSGGSSYVSRP
VWRTTSGDYAWRSGTGKSDTVTSPGYIIRKASTVSRGGYGRSSSARGHWGG

Specific function: Unknown

COG id: COG5463

COG function: function code S; Predicted integral membrane protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1790628, Length=212, Percent_Identity=69.811320754717, Blast_Score=321, Evalue=2e-89,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009576 [H]

Pfam domain/function: PF06693 DUF1190 [H]

EC number: NA

Molecular weight: Translated: 23261; Mature: 23130

Theoretical pI: Translated: 9.59; Mature: 9.59

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
0.5 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAKKRKSRSTSGVGHSAIRRIAEPVNPFERQRNRYTPKYLTLAIMGGAAFFLLKGYGDGS
CCCCCCCCCCCCCCHHHHHHHHHCCCHHHHHHCCCCCCEEEEEEECCEEEEEEECCCCCC
NSDNDGDGTFYATVNDCIDDGNSASVCADGWNNAKTEFYANVPKQLTQESCQSQFGDCYF
CCCCCCCEEEEEEEHHHHCCCCCCEEEECCCCCCCHHHHHHCHHHHHHHHHHHHHCCEEE
DITERSWVPVLSGFLLSRAIRQNRDEQYIYSSGGSSYVSRPVWRTTSGDYAWRSGTGKSD
EECCCCHHHHHHHHHHHHHHHCCCCCEEEECCCCCHHHCCCCEECCCCCCEECCCCCCCC
TVTSPGYIIRKASTVSRGGYGRSSSARGHWGG
CCCCCCEEEEECCHHCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
AKKRKSRSTSGVGHSAIRRIAEPVNPFERQRNRYTPKYLTLAIMGGAAFFLLKGYGDGS
CCCCCCCCCCCCCHHHHHHHHHCCCHHHHHHCCCCCCEEEEEEECCEEEEEEECCCCCC
NSDNDGDGTFYATVNDCIDDGNSASVCADGWNNAKTEFYANVPKQLTQESCQSQFGDCYF
CCCCCCCEEEEEEEHHHHCCCCCCEEEECCCCCCCHHHHHHCHHHHHHHHHHHHHCCEEE
DITERSWVPVLSGFLLSRAIRQNRDEQYIYSSGGSSYVSRPVWRTTSGDYAWRSGTGKSD
EECCCCHHHHHHHHHHHHHHHCCCCCEEEECCCCCHHHCCCCEECCCCCCEECCCCCCCC
TVTSPGYIIRKASTVSRGGYGRSSSARGHWGG
CCCCCCEEEEECCHHCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7610040; 9278503 [H]