| Definition | Salmonella enterica subsp. enterica serovar Typhi str. Ty2 chromosome, complete genome. |
|---|---|
| Accession | NC_004631 |
| Length | 4,791,961 |
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The map label for this gene is yjfI [H]
Identifier: 29144668
GI number: 29144668
Start: 4573721
End: 4574125
Strand: Direct
Name: yjfI [H]
Synonym: t4421
Alternate gene names: 29144668
Gene position: 4573721-4574125 (Clockwise)
Preceding gene: 29144667
Following gene: 29144669
Centisome position: 95.45
GC content: 40.25
Gene sequence:
>405_bases ATGGCATGGACTCCACGGACGCTGGCGGATGCGTTAAACAACATCGCCGAATTAGATATTGATATAGAAAATAATGAATC TTCATTAATAATAAAAATGAATGATTATGGCGATTTACCACTGACGGTTTTATTTACCTCGCAACAAATAGTTATCGAGA CTTATATCTGTCCGGTAAATACGATTAGAGATACCGCGGAATTTAATCTTTTCTTGCTGAGAAATCAGAAGGTTTTACCG CTGTCTTCGGTCGGTATTGCCCTGGTAAAACAGGAGGAATATTATGTCGCTTTTGGCGCGTTGTCGTTAAATTCGTCGCT TGCCGACGTGACGCTGGAAATCACCACGCTTGTAGAAAATGCGTTGGATATCGCTGAAATAACACAAGTCTATTCACAGG AATAA
Upstream 100 bases:
>100_bases CATAATCGGATGGTTTTTTTTTATCTTTGGCTGGTAATATAAAAAGCAAAACCTACCCTGTAACTCCCTTTATTTATAAA AAAGAGATAGAGATAATAAT
Downstream 100 bases:
>100_bases TACAGGCGGCTTACATGGGAATTTTAAAAAGTTTGTTCACGTTAGGTAAATCATTCGTTGCTCAGGCAGAAGAAGCCATT GATGAAGCACAGGGTGTACG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 134; Mature: 133
Protein sequence:
>134_residues MAWTPRTLADALNNIAELDIDIENNESSLIIKMNDYGDLPLTVLFTSQQIVIETYICPVNTIRDTAEFNLFLLRNQKVLP LSSVGIALVKQEEYYVAFGALSLNSSLADVTLEITTLVENALDIAEITQVYSQE
Sequences:
>Translated_134_residues MAWTPRTLADALNNIAELDIDIENNESSLIIKMNDYGDLPLTVLFTSQQIVIETYICPVNTIRDTAEFNLFLLRNQKVLP LSSVGIALVKQEEYYVAFGALSLNSSLADVTLEITTLVENALDIAEITQVYSQE >Mature_133_residues AWTPRTLADALNNIAELDIDIENNESSLIIKMNDYGDLPLTVLFTSQQIVIETYICPVNTIRDTAEFNLFLLRNQKVLPL SSVGIALVKQEEYYVAFGALSLNSSLADVTLEITTLVENALDIAEITQVYSQE
Specific function: Unknown
COG id: COG3789
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1790624, Length=133, Percent_Identity=63.9097744360902, Blast_Score=181, Evalue=1e-47,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR019231 [H]
Pfam domain/function: PF09938 DUF2170 [H]
EC number: NA
Molecular weight: Translated: 14928; Mature: 14797
Theoretical pI: Translated: 3.72; Mature: 3.72
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAWTPRTLADALNNIAELDIDIENNESSLIIKMNDYGDLPLTVLFTSQQIVIETYICPVN CCCCCHHHHHHHCCHHEEEEEEECCCCEEEEEECCCCCCCEEEEEECCEEEEEEEECCCC TIRDTAEFNLFLLRNQKVLPLSSVGIALVKQEEYYVAFGALSLNSSLADVTLEITTLVEN CCCCCCEEEEEEEECCCCCCCCCCCEEEEECCCEEEEEEEEECCCCCHHEEEEHHHHHHH ALDIAEITQVYSQE HHHHHHHHHHHCCC >Mature Secondary Structure AWTPRTLADALNNIAELDIDIENNESSLIIKMNDYGDLPLTVLFTSQQIVIETYICPVN CCCCHHHHHHHCCHHEEEEEEECCCCEEEEEECCCCCCCEEEEEECCEEEEEEEECCCC TIRDTAEFNLFLLRNQKVLPLSSVGIALVKQEEYYVAFGALSLNSSLADVTLEITTLVEN CCCCCCEEEEEEEECCCCCCCCCCCEEEEECCCEEEEEEEEECCCCCHHEEEEHHHHHHH ALDIAEITQVYSQE HHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]