| Definition | Salmonella enterica subsp. enterica serovar Typhi str. Ty2 chromosome, complete genome. |
|---|---|
| Accession | NC_004631 |
| Length | 4,791,961 |
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The map label for this gene is hflK [H]
Identifier: 29144661
GI number: 29144661
Start: 4565701
End: 4566960
Strand: Direct
Name: hflK [H]
Synonym: t4414
Alternate gene names: 29144661
Gene position: 4565701-4566960 (Clockwise)
Preceding gene: 29144660
Following gene: 29144662
Centisome position: 95.28
GC content: 56.35
Gene sequence:
>1260_bases ATGGCGTGGAATCAGCCCGGTAATAACGGACAGGACCGCGACCCGTGGGGAAGCAGCAAACCTGGCAGCAACTCTGGGGG AAATGGAAACAAAGGTGGCCGCGATCAGGGACCTCCCGATCTGGATGATATCTTCCGTAAGCTGAGTAAAAAACTCGGTG GTTTTGGGGGCGGTAAAGGCACCGGTTCCGGCGGCGGTAGCTCATCGCAAGGCCCGCGTCCGCAACTGGGAGGCCGTATT GTCGCCATCGCCGCGGCGGCAGTAGTCATTATCTGGGCGGCCAGCGGTTTTTATACCATTAAAGAAGCCGAGCGCGGCGT TGTGACGCGTTTTGGTAAATTCAGCCATCTGGTAGAGCCAGGTCTGAACTGGAAGCCGACATTTATTGACGACGTCACGC CGGTGAACGTCGAAGCGGTGCGCGAACTGGCGGCGTCAGGCGTGATGCTGACGTCTGATGAAAACGTCGTGCGCGTTGAA ATGAACGTGCAATACCGCGTCACCGATCCGCAGAAATATCTGTTTAGCGTGACCAGCCCGGACGATAGCCTGCGTCAGGC CACCGACAGCGCGTTGCGTGGCGTCATTGGTAAATACACGATGGATCGCATTCTGACCGAAGGTCGTACCGTTATTCGTA GCGATACCCAACGCGAGCTGGAAGAGACTATCAAACCGTACAACATGGGGATTACCCTGCTGGACGTGAACTTCCAGGCT GCGCGTCCGCCGGAAGAGATGAAAGCCGCCTTTGACGACGCGATTGCCGCACGTGAAAACGAGCAGCAGTACATTCGTGA AGCGGAAGCGTATACCAACGAAGTTCAGCCGCGCGCCAACGGTCAGGCGCAGCGTATTCTGGAAGAGGCACGTGCCTATA AAACCCAGACTATCCTGGAAGCGCAGGGTGAAGTCGCCCGGTTTGCGAAGATTTTGCCAGAATATAAAGCCGCGCCGCAG ATTACGCGCGAGCGTCTGTATATTGAAACGATGGAAAAAGTGCTGAGCCATACCCGTAAAGTACTGGTTAACGACAAGAG CGGTAATTTAATGGTGCTGCCGTTAGATCAGATGCTGAAAGGCGGGAATGCGCCGGCGGCAAAGAGCGACAATAGCGCCA GCAACCTGCTGCGCCTGCCGCCGTCCACAAAGTCTAACGCCAGCGGAGCAAGCAACACGTCGTCCTCAAATCAGGGCGAT ATTATGGACCAACGCCGCGCGAATGCGCAGCGTAACGACTACCAGCGTCAGGGGGAATAA
Upstream 100 bases:
>100_bases TCTGTAACGGCGGTTCGTCTGAAGCATGGAGTAATTTCGCCTTATCCTCTGAGGTCGAAAGACAACGGGGATCACCGCAT AACAAATATGGAGCACAAAC
Downstream 100 bases:
>100_bases CGATGCGTAAGTCAGTTATTGCGATTATCATCATCGTGCTGGTAGTGCTCTACATGTCCGTCTTTGTGGTCAAAGAGGGC GAGCGCGGCATTACGCTGCG
Product: FtsH protease regulator HflK
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 419; Mature: 418
Protein sequence:
>419_residues MAWNQPGNNGQDRDPWGSSKPGSNSGGNGNKGGRDQGPPDLDDIFRKLSKKLGGFGGGKGTGSGGGSSSQGPRPQLGGRI VAIAAAAVVIIWAASGFYTIKEAERGVVTRFGKFSHLVEPGLNWKPTFIDDVTPVNVEAVRELAASGVMLTSDENVVRVE MNVQYRVTDPQKYLFSVTSPDDSLRQATDSALRGVIGKYTMDRILTEGRTVIRSDTQRELEETIKPYNMGITLLDVNFQA ARPPEEMKAAFDDAIAARENEQQYIREAEAYTNEVQPRANGQAQRILEEARAYKTQTILEAQGEVARFAKILPEYKAAPQ ITRERLYIETMEKVLSHTRKVLVNDKSGNLMVLPLDQMLKGGNAPAAKSDNSASNLLRLPPSTKSNASGASNTSSSNQGD IMDQRRANAQRNDYQRQGE
Sequences:
>Translated_419_residues MAWNQPGNNGQDRDPWGSSKPGSNSGGNGNKGGRDQGPPDLDDIFRKLSKKLGGFGGGKGTGSGGGSSSQGPRPQLGGRI VAIAAAAVVIIWAASGFYTIKEAERGVVTRFGKFSHLVEPGLNWKPTFIDDVTPVNVEAVRELAASGVMLTSDENVVRVE MNVQYRVTDPQKYLFSVTSPDDSLRQATDSALRGVIGKYTMDRILTEGRTVIRSDTQRELEETIKPYNMGITLLDVNFQA ARPPEEMKAAFDDAIAARENEQQYIREAEAYTNEVQPRANGQAQRILEEARAYKTQTILEAQGEVARFAKILPEYKAAPQ ITRERLYIETMEKVLSHTRKVLVNDKSGNLMVLPLDQMLKGGNAPAAKSDNSASNLLRLPPSTKSNASGASNTSSSNQGD IMDQRRANAQRNDYQRQGE >Mature_418_residues AWNQPGNNGQDRDPWGSSKPGSNSGGNGNKGGRDQGPPDLDDIFRKLSKKLGGFGGGKGTGSGGGSSSQGPRPQLGGRIV AIAAAAVVIIWAASGFYTIKEAERGVVTRFGKFSHLVEPGLNWKPTFIDDVTPVNVEAVRELAASGVMLTSDENVVRVEM NVQYRVTDPQKYLFSVTSPDDSLRQATDSALRGVIGKYTMDRILTEGRTVIRSDTQRELEETIKPYNMGITLLDVNFQAA RPPEEMKAAFDDAIAARENEQQYIREAEAYTNEVQPRANGQAQRILEEARAYKTQTILEAQGEVARFAKILPEYKAAPQI TRERLYIETMEKVLSHTRKVLVNDKSGNLMVLPLDQMLKGGNAPAAKSDNSASNLLRLPPSTKSNASGASNTSSSNQGDI MDQRRANAQRNDYQRQGE
Specific function: HflC and HflK govern the stability of phage lambda cII protein and have been proposed to encode or regulate a cII- specific protease [H]
COG id: COG0330
COG function: function code O; Membrane protease subunits, stomatin/prohibitin homologs
Gene ontology:
Cell location: Membrane; Single-pass membrane protein (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the band 7/mec-2 family. HflK subfamily [H]
Homologues:
Organism=Escherichia coli, GI1790616, Length=419, Percent_Identity=93.3174224343675, Blast_Score=704, Evalue=0.0, Organism=Escherichia coli, GI1786697, Length=218, Percent_Identity=22.9357798165138, Blast_Score=63, Evalue=3e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001107 - InterPro: IPR010201 - InterPro: IPR020980 - InterPro: IPR001972 [H]
Pfam domain/function: PF01145 Band_7; PF12221 HflK_N [H]
EC number: NA
Molecular weight: Translated: 45663; Mature: 45531
Theoretical pI: Translated: 9.04; Mature: 9.04
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAWNQPGNNGQDRDPWGSSKPGSNSGGNGNKGGRDQGPPDLDDIFRKLSKKLGGFGGGKG CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCC TGSGGGSSSQGPRPQLGGRIVAIAAAAVVIIWAASGFYTIKEAERGVVTRFGKFSHLVEP CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEHHHHCHHHHHHHHHHHHHCC GLNWKPTFIDDVTPVNVEAVRELAASGVMLTSDENVVRVEMNVQYRVTDPQKYLFSVTSP CCCCCCCCCCCCCCCCHHHHHHHHHCCEEEECCCCEEEEEEEEEEEECCHHHEEEEECCC DDSLRQATDSALRGVIGKYTMDRILTEGRTVIRSDTQRELEETIKPYNMGITLLDVNFQA CHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCHHHHHHHHHHCHHHCCEEEEEECCCC ARPPEEMKAAFDDAIAARENEQQYIREAEAYTNEVQPRANGQAQRILEEARAYKTQTILE CCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHH AQGEVARFAKILPEYKAAPQITRERLYIETMEKVLSHTRKVLVNDKSGNLMVLPLDQMLK HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCEEEEEHHHHHC GGNAPAAKSDNSASNLLRLPPSTKSNASGASNTSSSNQGDIMDQRRANAQRNDYQRQGE CCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCHHHHHHHCCC >Mature Secondary Structure AWNQPGNNGQDRDPWGSSKPGSNSGGNGNKGGRDQGPPDLDDIFRKLSKKLGGFGGGKG CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCC TGSGGGSSSQGPRPQLGGRIVAIAAAAVVIIWAASGFYTIKEAERGVVTRFGKFSHLVEP CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEHHHHCHHHHHHHHHHHHHCC GLNWKPTFIDDVTPVNVEAVRELAASGVMLTSDENVVRVEMNVQYRVTDPQKYLFSVTSP CCCCCCCCCCCCCCCCHHHHHHHHHCCEEEECCCCEEEEEEEEEEEECCHHHEEEEECCC DDSLRQATDSALRGVIGKYTMDRILTEGRTVIRSDTQRELEETIKPYNMGITLLDVNFQA CHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCHHHHHHHHHHCHHHCCEEEEEECCCC ARPPEEMKAAFDDAIAARENEQQYIREAEAYTNEVQPRANGQAQRILEEARAYKTQTILE CCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHH AQGEVARFAKILPEYKAAPQITRERLYIETMEKVLSHTRKVLVNDKSGNLMVLPLDQMLK HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCEEEEEHHHHHC GGNAPAAKSDNSASNLLRLPPSTKSNASGASNTSSSNQGDIMDQRRANAQRNDYQRQGE CCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: Hydrolase; Acting on peptide bonds (Peptidases) [C]
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]