| Definition | Salmonella enterica subsp. enterica serovar Typhi str. Ty2 chromosome, complete genome. |
|---|---|
| Accession | NC_004631 |
| Length | 4,791,961 |
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The map label for this gene is artJ [H]
Identifier: 29144652
GI number: 29144652
Start: 4554888
End: 4555607
Strand: Reverse
Name: artJ [H]
Synonym: t4403
Alternate gene names: 29144652
Gene position: 4555607-4554888 (Counterclockwise)
Preceding gene: 29144653
Following gene: 161486770
Centisome position: 95.07
GC content: 49.44
Gene sequence:
>720_bases ATGCTGTTAGCCAGCCTCTCCGTTCACGCTGCTTCCGTTTCCGCCAGAACATTACATTTTGGCACCTCCGCCACCTATGC GCCCTATGAGTTTGTCGATGCCGATAATAAAATTGTTGGTTTCGATATTGATGTCGCCAACGCGGTCTGCAAAGAGATGC AAGCGGAGTGCTCATTCACTAACCAGAGCTTTGATAGTCTGATCCCCGGCCTACGTTTCAAAAAGTTTGATGCGGTGATC GCCGGTATGGATATGACGCCCAAACGTGAGCAGCAGGTCTCCTTTAGCCAACCCTATTACGAAGGTTTATCGGCGGTAGT CGTCACGCGTAAAGGGGCTTATCACACTTTTGCCGATCTGAAAGGCAAAAAAGTCGGACTGGAAAACGGTACAACGCATC AGCGCTATTTGCAGGATAAACAACAAGCTATCACGCCTGTCGCCTATGACAGCTATCTAAACGCTTTTACCGATCTGAAA AATAACCGTCTTGAGGGCGTGTTTGGCGATGTCGCCGCGATTGGTAAGTGGCTAAAAAACAATCCGGATTACGCCATCAT GGATGAACGCGCCAGCGATCCTGACTACTACGGAAAAGGGTTAGGCATTGCGGTACGCAAAGGCAACGACGCGCTATTGC AAGAAATTAATGCCGCGCTCGACAAGGTGAAAGCGTCGCCGGAATATGCGCAAATGCAGGAGAAATGGTTTACGCAGTAA
Upstream 100 bases:
>100_bases GCACAGAATCAGAATAGCACCCTGCGCCAAAAAAAGAATAGCACGGTGACCACAACATCCAATTGATATCAGGGATCAAG ATGAAAAAAAACTTATTGTC
Downstream 100 bases:
>100_bases TTCAGTGGCGGGAGAGCTGCCGGATGAGACGCTCTGGCGTTGCCATCCGGCATGTTACGCCTCACAGCTTAATGAAATGC TCGCGGTAGTAAGCCAGCTC
Product: arginine-binding periplasmic protein
Products: ADP; phosphate; L-arginine [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 239; Mature: 239
Protein sequence:
>239_residues MLLASLSVHAASVSARTLHFGTSATYAPYEFVDADNKIVGFDIDVANAVCKEMQAECSFTNQSFDSLIPGLRFKKFDAVI AGMDMTPKREQQVSFSQPYYEGLSAVVVTRKGAYHTFADLKGKKVGLENGTTHQRYLQDKQQAITPVAYDSYLNAFTDLK NNRLEGVFGDVAAIGKWLKNNPDYAIMDERASDPDYYGKGLGIAVRKGNDALLQEINAALDKVKASPEYAQMQEKWFTQ
Sequences:
>Translated_239_residues MLLASLSVHAASVSARTLHFGTSATYAPYEFVDADNKIVGFDIDVANAVCKEMQAECSFTNQSFDSLIPGLRFKKFDAVI AGMDMTPKREQQVSFSQPYYEGLSAVVVTRKGAYHTFADLKGKKVGLENGTTHQRYLQDKQQAITPVAYDSYLNAFTDLK NNRLEGVFGDVAAIGKWLKNNPDYAIMDERASDPDYYGKGLGIAVRKGNDALLQEINAALDKVKASPEYAQMQEKWFTQ >Mature_239_residues MLLASLSVHAASVSARTLHFGTSATYAPYEFVDADNKIVGFDIDVANAVCKEMQAECSFTNQSFDSLIPGLRFKKFDAVI AGMDMTPKREQQVSFSQPYYEGLSAVVVTRKGAYHTFADLKGKKVGLENGTTHQRYLQDKQQAITPVAYDSYLNAFTDLK NNRLEGVFGDVAAIGKWLKNNPDYAIMDERASDPDYYGKGLGIAVRKGNDALLQEINAALDKVKASPEYAQMQEKWFTQ
Specific function: Part of the ABC transporter complex ArtPIQMJ involved in arginine transport. Binds L-arginine with high affinity [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Periplasm [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the bacterial solute-binding protein 3 family [H]
Homologues:
Organism=Escherichia coli, GI1787085, Length=238, Percent_Identity=57.1428571428571, Blast_Score=302, Evalue=2e-83, Organism=Escherichia coli, GI1787088, Length=236, Percent_Identity=52.9661016949153, Blast_Score=273, Evalue=1e-74, Organism=Escherichia coli, GI1788649, Length=244, Percent_Identity=35.655737704918, Blast_Score=149, Evalue=1e-37, Organism=Escherichia coli, GI1788648, Length=228, Percent_Identity=32.8947368421053, Blast_Score=138, Evalue=3e-34, Organism=Escherichia coli, GI1788228, Length=224, Percent_Identity=31.25, Blast_Score=115, Evalue=3e-27, Organism=Escherichia coli, GI1787031, Length=236, Percent_Identity=29.2372881355932, Blast_Score=101, Evalue=4e-23,
Paralogues:
None
Copy number: 1180 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR015683 - InterPro: IPR005768 - InterPro: IPR001638 - InterPro: IPR018313 [H]
Pfam domain/function: PF00497 SBP_bac_3 [H]
EC number: NA
Molecular weight: Translated: 26479; Mature: 26479
Theoretical pI: Translated: 6.13; Mature: 6.13
Prosite motif: PS01039 SBP_BACTERIAL_3
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLLASLSVHAASVSARTLHFGTSATYAPYEFVDADNKIVGFDIDVANAVCKEMQAECSFT CEEECCCHHHHHCEEEEEEECCCCCCCCEEEECCCCEEEEEECHHHHHHHHHHHHHHCCC NQSFDSLIPGLRFKKFDAVIAGMDMTPKREQQVSFSQPYYEGLSAVVVTRKGAYHTFADL CCCHHHHCCCCCHHHHHHHHCCCCCCCCHHHCCCCCCCHHHCCEEEEEECCCCCHHHHHC KGKKVGLENGTTHQRYLQDKQQAITPVAYDSYLNAFTDLKNNRLEGVFGDVAAIGKWLKN CCCEECCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHC NPDYAIMDERASDPDYYGKGLGIAVRKGNDALLQEINAALDKVKASPEYAQMQEKWFTQ CCCEEEECCCCCCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHCCCCHHHHHHHHHCCC >Mature Secondary Structure MLLASLSVHAASVSARTLHFGTSATYAPYEFVDADNKIVGFDIDVANAVCKEMQAECSFT CEEECCCHHHHHCEEEEEEECCCCCCCCEEEECCCCEEEEEECHHHHHHHHHHHHHHCCC NQSFDSLIPGLRFKKFDAVIAGMDMTPKREQQVSFSQPYYEGLSAVVVTRKGAYHTFADL CCCHHHHCCCCCHHHHHHHHCCCCCCCCHHHCCCCCCCHHHCCEEEEEECCCCCHHHHHC KGKKVGLENGTTHQRYLQDKQQAITPVAYDSYLNAFTDLKNNRLEGVFGDVAAIGKWLKN CCCEECCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHC NPDYAIMDERASDPDYYGKGLGIAVRKGNDALLQEINAALDKVKASPEYAQMQEKWFTQ CCCEEEECCCCCCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHCCCCHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; L-arginine [Periplasm]; H2O [C]
Specific reaction: ATP + L-arginine [Periplasm] + H2O = ADP + phosphate + L-arginine [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8501075; 8905232; 9278503; 9298646; 9600841 [H]