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The map label for this gene is cII [H]

Identifier: 29144615

GI number: 29144615

Start: 4520121

End: 4520342

Strand: Direct

Name: cII [H]

Synonym: t4364

Alternate gene names: 29144615

Gene position: 4520121-4520342 (Clockwise)

Preceding gene: 29144614

Following gene: 29144618

Centisome position: 94.33

GC content: 59.01

Gene sequence:

>222_bases
ATGACGCAACAGGACTGGCATCCCGCCGACATTATCGCGGGGTTGAGAAAACGGGGCACCTCGCTGGCGGCGCTGTCCCG
TCAGTCGGGGCTGGCGTCCTCAACGCTGGCAAATGCGCTGATAAGGCACTGGCCCAAAGGCGAAAGGCTGATTGCCGAAG
CGTTGGGTATTGCGCCAGAGCAAATCTGGCCTTCCCACTACCGCAAGCCTGAAAATTACTAA

Upstream 100 bases:

>100_bases
GCCTGCTGTACGACCTGATCCATTATTTTTCTGATGAAATCACGGCCCCGCGCTGGCTGCGTACCGCTGACGGCGTGAAG
TTTATTGACGAGGTGACAGC

Downstream 100 bases:

>100_bases
ATCGTCTCTCCCGATCTTCTGATGGCTTTGCTGTCAGAAGATCGGGAGAAGGCAAGCGAAGCGCGGCAGTTCAGGCTCGC
AAATAATCTTTTTGACGTAC

Product: transcriptional regulator

Products: NA

Alternate protein names: Ner-like protein [H]

Number of amino acids: Translated: 73; Mature: 72

Protein sequence:

>73_residues
MTQQDWHPADIIAGLRKRGTSLAALSRQSGLASSTLANALIRHWPKGERLIAEALGIAPEQIWPSHYRKPENY

Sequences:

>Translated_73_residues
MTQQDWHPADIIAGLRKRGTSLAALSRQSGLASSTLANALIRHWPKGERLIAEALGIAPEQIWPSHYRKPENY
>Mature_72_residues
TQQDWHPADIIAGLRKRGTSLAALSRQSGLASSTLANALIRHWPKGERLIAEALGIAPEQIWPSHYRKPENY

Specific function: This protein is involved in positive regulation of the metabolism of sugars [H]

COG id: COG3423

COG function: function code K; Predicted transcriptional regulator

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ner transcriptional regulatory family [H]

Homologues:

Organism=Escherichia coli, GI1789579, Length=69, Percent_Identity=69.5652173913043, Blast_Score=100, Evalue=3e-23,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010982 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 8146; Mature: 8015

Theoretical pI: Translated: 10.31; Mature: 10.31

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTQQDWHPADIIAGLRKRGTSLAALSRQSGLASSTLANALIRHWPKGERLIAEALGIAPE
CCCCCCCHHHHHHHHHHCCCHHHHHHHHCCCHHHHHHHHHHHHCCCCHHHHHHHHCCCCH
QIWPSHYRKPENY
HCCHHHCCCCCCC
>Mature Secondary Structure 
TQQDWHPADIIAGLRKRGTSLAALSRQSGLASSTLANALIRHWPKGERLIAEALGIAPE
CCCCCCHHHHHHHHHHCCCHHHHHHHHCCCHHHHHHHHHHHHCCCCHHHHHHHHCCCCH
QIWPSHYRKPENY
HCCHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]