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The map label for this gene is vexB

Identifier: 29144598

GI number: 29144598

Start: 4498207

End: 4499001

Strand: Reverse

Name: vexB

Synonym: t4347

Alternate gene names: 29144598

Gene position: 4499001-4498207 (Counterclockwise)

Preceding gene: 29144599

Following gene: 29144597

Centisome position: 93.89

GC content: 38.24

Gene sequence:

>795_bases
ATGAATATTTTGAAAAATAATTCTTATTATTTTATGAAACTCATTACCGTCTGTGAGTTAATTATTTTATTGATGTCACG
CGATATCAAAACACGCTATAACGGTAATTTACTAAACTATATGATGGTGCTGGCCGTACCACTGGTATGGATATCCATTA
CCGTTATTTCTTTTCAATATTTAAATCGCTCGGTGCCAATATCCACTGACGATATCAGTTTTGTTATTGCAGGGATATTA
CCGTATCTGTTATTTCGTTATACCATTACCGCAACCATGCGAACCCATTCATTCTCTACATCGTTAGCGGTTGTCTCGCA
GGTTAAGAAAAGACATGTGATTTTTTCTCTTGCCGCAATCGAATTTGTTAATGCAGTTATCATTTATATTATTATTTCAT
TAATTAACTTTCTTATATTCTCCCGTTGGGAGGCCCAAAAACCGTTCCTGATTTTTGAAGGGATGGTTATCGCATGGCTT
CTGGGGTTATCGTTTGGTTACTTTTGTGACGCACTGTCTGAACGGTTTCCGCTGGTCTACAAAGCTGTTCCTGTGATGCT
AAGACCGATGTTTTTGATTTCGGCTGTCTTTTATACGGCGAATGAATTGCCTTATTCATTATTAAGCATATTCAGCTGGA
ACCCTCTACTACATGCTAATGAGATAGTCAGAGAAGGTATGTTTGAGGGGTATCACTCCTTGTACCTTGAACCTTTTTAC
CCTCTGGCATTTTCCGCAACGTTATTCCTCGCGGGCCTCATTTTTCACCTGATTTGTGACACTGAAAATCACTGA

Upstream 100 bases:

>100_bases
TATCTATATCTCGAACGCCTCTTTGACTGATTTCGCTAAGGTGAAAGCCGCATTCGATAGCTTTTTGACCCGCGGCACTA
ATTCTTTCTAATGTCGCCAT

Downstream 100 bases:

>100_bases
CTTTAGCTTCAGGAGAGACGCATTCGTGTTCGGTTTATTAGGTTGTACACGCTATTTTGAGTCTGATAAGGGCCCGCGGG
TGGTCCTTGATAAAACAGAT

Product: VI polysaccharide export inner-membrane protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 264; Mature: 264

Protein sequence:

>264_residues
MNILKNNSYYFMKLITVCELIILLMSRDIKTRYNGNLLNYMMVLAVPLVWISITVISFQYLNRSVPISTDDISFVIAGIL
PYLLFRYTITATMRTHSFSTSLAVVSQVKKRHVIFSLAAIEFVNAVIIYIIISLINFLIFSRWEAQKPFLIFEGMVIAWL
LGLSFGYFCDALSERFPLVYKAVPVMLRPMFLISAVFYTANELPYSLLSIFSWNPLLHANEIVREGMFEGYHSLYLEPFY
PLAFSATLFLAGLIFHLICDTENH

Sequences:

>Translated_264_residues
MNILKNNSYYFMKLITVCELIILLMSRDIKTRYNGNLLNYMMVLAVPLVWISITVISFQYLNRSVPISTDDISFVIAGIL
PYLLFRYTITATMRTHSFSTSLAVVSQVKKRHVIFSLAAIEFVNAVIIYIIISLINFLIFSRWEAQKPFLIFEGMVIAWL
LGLSFGYFCDALSERFPLVYKAVPVMLRPMFLISAVFYTANELPYSLLSIFSWNPLLHANEIVREGMFEGYHSLYLEPFY
PLAFSATLFLAGLIFHLICDTENH
>Mature_264_residues
MNILKNNSYYFMKLITVCELIILLMSRDIKTRYNGNLLNYMMVLAVPLVWISITVISFQYLNRSVPISTDDISFVIAGIL
PYLLFRYTITATMRTHSFSTSLAVVSQVKKRHVIFSLAAIEFVNAVIIYIIISLINFLIFSRWEAQKPFLIFEGMVIAWL
LGLSFGYFCDALSERFPLVYKAVPVMLRPMFLISAVFYTANELPYSLLSIFSWNPLLHANEIVREGMFEGYHSLYLEPFY
PLAFSATLFLAGLIFHLICDTENH

Specific function: May form an ATP-driven Vi polysaccharide export apparatus, in association with the vexA, vexC and vexD proteins

COG id: COG1682

COG function: function code GM; ABC-type polysaccharide/polyol phosphate export systems, permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Potential)

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-2 domain

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): VEXB_SALTI (P43109)

Other databases:

- EMBL:   D14156
- EMBL:   AL627283
- EMBL:   AE014613
- PIR:   G36892
- RefSeq:   NP_458733.1
- RefSeq:   NP_807940.1
- GeneID:   1069972
- GeneID:   1250855
- GenomeReviews:   AE014613_GR
- GenomeReviews:   AL513382_GR
- KEGG:   stt:t4347
- KEGG:   sty:STY4654
- HOGENOM:   HBG675564
- OMA:   ALAFQYI
- ProtClustDB:   PRK15176
- BioCyc:   SENT209261:T4347-MONOMER
- BioCyc:   SENT220341:STY4654-MONOMER
- InterPro:   IPR013526
- InterPro:   IPR013525
- PRINTS:   PR00164

Pfam domain/function: PF01061 ABC2_membrane

EC number: NA

Molecular weight: Translated: 30430; Mature: 30430

Theoretical pI: Translated: 8.06; Mature: 8.06

Prosite motif: PS51012 ABC_TM2

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0x134a5b4c)-; HASH(0x134d7210)-; HASH(0x1344a820)-; HASH(0xea6ff9c)-; HASH(0x12b00ea0)-; HASH(0x12b430f8)-;

Cys/Met content:

1.1 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNILKNNSYYFMKLITVCELIILLMSRDIKTRYNGNLLNYMMVLAVPLVWISITVISFQY
CCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH
LNRSVPISTDDISFVIAGILPYLLFRYTITATMRTHSFSTSLAVVSQVKKRHVIFSLAAI
HCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH
EFVNAVIIYIIISLINFLIFSRWEAQKPFLIFEGMVIAWLLGLSFGYFCDALSERFPLVY
HHHHHHHHHHHHHHHHHHHHHCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH
KAVPVMLRPMFLISAVFYTANELPYSLLSIFSWNPLLHANEIVREGMFEGYHSLYLEPFY
HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCH
PLAFSATLFLAGLIFHLICDTENH
HHHHHHHHHHHHHHHHHHHCCCCH
>Mature Secondary Structure
MNILKNNSYYFMKLITVCELIILLMSRDIKTRYNGNLLNYMMVLAVPLVWISITVISFQY
CCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH
LNRSVPISTDDISFVIAGILPYLLFRYTITATMRTHSFSTSLAVVSQVKKRHVIFSLAAI
HCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH
EFVNAVIIYIIISLINFLIFSRWEAQKPFLIFEGMVIAWLLGLSFGYFCDALSERFPLVY
HHHHHHHHHHHHHHHHHHHHHCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH
KAVPVMLRPMFLISAVFYTANELPYSLLSIFSWNPLLHANEIVREGMFEGYHSLYLEPFY
HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCH
PLAFSATLFLAGLIFHLICDTENH
HHHHHHHHHHHHHHHHHHHCCCCH

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8331073; 11677608; 12644504