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The map label for this gene is cII

Identifier: 29144587

GI number: 29144587

Start: 4488294

End: 4488803

Strand: Reverse

Name: cII

Synonym: t4335

Alternate gene names: NA

Gene position: 4488803-4488294 (Counterclockwise)

Preceding gene: 29144588

Following gene: 29144586

Centisome position: 93.67

GC content: 54.71

Gene sequence:

>510_bases
ATGTTTGATTATAAGATTTCCAAACATCCACACTTTGACGAAGCCTGCCGGGCTTTCGCGCTGCGTCACAACATGGCGAA
GCTGGCAGAACGCGCGGGAATGAAAGTCCAGACGCTGCGTAACAAGCTGAACCCGGAACAACCGCATCAGCTCACGCCGT
CGGAGATCTGGCTGCTTACCGATATTACTGAGGACTCCACGCTGGTAGATGGTTTCCTGGCACAGATTCACTGCCTGCCA
TGCATACCGATGAACGAAGTGGCAAAAGAGAAGCTGCCGCATTACGTCATGAGCGCTACTGCTGAAATCGGACGTGTTGC
TGCCGGTGCTGTATCGGGTGATGTGAAAACTACTGCAGGCCGCCGCGATGTTATCAGTAGCATCAACTCAGTTACTCGTC
TAATGGCACTGGCTGCCGTTTCCATGCAGGCACGTTTGCAGGCTAACCCGGCGATGGCAAGCGCGGTGGATACCGTGACG
GGCCTCGGCGCTTCATTCGGTCTGATCTGA

Upstream 100 bases:

>100_bases
TGTACAAAACCGACCAGGTTCGTGAGTCTCTGGGTCATTCCAACTTCCGCGTCATTGTTGGTCAGTAAGTTCGATTATGA
GAACTTTCTAAGGGGCTTGC

Downstream 100 bases:

>100_bases
GGTGGCTATGCTGACTAAAGAACCATCTTTTGCATCACTTCTCGTTAAGCAAAGTCCTGCAATGCACTGCGGTCATGGCT
GGATTATGGGGAAGGATGGC

Product: phage regulatory protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 169; Mature: 169

Protein sequence:

>169_residues
MFDYKISKHPHFDEACRAFALRHNMAKLAERAGMKVQTLRNKLNPEQPHQLTPSEIWLLTDITEDSTLVDGFLAQIHCLP
CIPMNEVAKEKLPHYVMSATAEIGRVAAGAVSGDVKTTAGRRDVISSINSVTRLMALAAVSMQARLQANPAMASAVDTVT
GLGASFGLI

Sequences:

>Translated_169_residues
MFDYKISKHPHFDEACRAFALRHNMAKLAERAGMKVQTLRNKLNPEQPHQLTPSEIWLLTDITEDSTLVDGFLAQIHCLP
CIPMNEVAKEKLPHYVMSATAEIGRVAAGAVSGDVKTTAGRRDVISSINSVTRLMALAAVSMQARLQANPAMASAVDTVT
GLGASFGLI
>Mature_169_residues
MFDYKISKHPHFDEACRAFALRHNMAKLAERAGMKVQTLRNKLNPEQPHQLTPSEIWLLTDITEDSTLVDGFLAQIHCLP
CIPMNEVAKEKLPHYVMSATAEIGRVAAGAVSGDVKTTAGRRDVISSINSVTRLMALAAVSMQARLQANPAMASAVDTVT
GLGASFGLI

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009679 [H]

Pfam domain/function: PF06892 Phage_CP76 [H]

EC number: NA

Molecular weight: Translated: 18300; Mature: 18300

Theoretical pI: Translated: 8.11; Mature: 8.11

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
4.7 %Met     (Translated Protein)
6.5 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
4.7 %Met     (Mature Protein)
6.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFDYKISKHPHFDEACRAFALRHNMAKLAERAGMKVQTLRNKLNPEQPHQLTPSEIWLLT
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCCCCCEEEEE
DITEDSTLVDGFLAQIHCLPCIPMNEVAKEKLPHYVMSATAEIGRVAAGAVSGDVKTTAG
ECCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
RRDVISSINSVTRLMALAAVSMQARLQANPAMASAVDTVTGLGASFGLI
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCHHCCCC
>Mature Secondary Structure
MFDYKISKHPHFDEACRAFALRHNMAKLAERAGMKVQTLRNKLNPEQPHQLTPSEIWLLT
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCCCCCEEEEE
DITEDSTLVDGFLAQIHCLPCIPMNEVAKEKLPHYVMSATAEIGRVAAGAVSGDVKTTAG
ECCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
RRDVISSINSVTRLMALAAVSMQARLQANPAMASAVDTVTGLGASFGLI
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1701261 [H]