| Definition | Salmonella enterica subsp. enterica serovar Typhi str. Ty2 chromosome, complete genome. |
|---|---|
| Accession | NC_004631 |
| Length | 4,791,961 |
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The map label for this gene is 29144580
Identifier: 29144580
GI number: 29144580
Start: 4483416
End: 4485824
Strand: Reverse
Name: 29144580
Synonym: t4328
Alternate gene names: NA
Gene position: 4485824-4483416 (Counterclockwise)
Preceding gene: 29144581
Following gene: 29144579
Centisome position: 93.61
GC content: 56.58
Gene sequence:
>2409_bases GTGGCAGTGAGTAAAATCACATTACATTATGCACAAACCACCGGCGGCTCGAATGAGGCCGCCGCAGCCTTTCCATGGAA TACCCCAAAAAAAGCGGTTAACCCGTATCTGGACCCGGCGGAATTTGCGCCGGAGTCTGCGCTTTCAAACCTGATCGCTC TTTACGCTGTGGATAACGAGCAGGAGCAGTTGCGCCGTGAGACGCTGAGCGATGAGGTCTGGGAGCGCTATTTCTTCAAT GAATCCCGTGATCCTGTCCAGCGTGAAATGGAGCAGGATCGGCTGATTAACCATGCCAAAACGGCGCGCGAGCAGCAGCG TTTTAATCCCGATCTGGTCATTATTGCCAACGTGGGCGCCCAACCGGCGCATATCAGCAAGCCTCTGCTGGAGCGGATTA AATATTTCCATAGTCTGGGCAGAGCAAAAGCTTATTCCCGCTACCTGCAAAAAACAATCAGGCCGTGTCTTGAGCGGCTG GAGCGCGTGCGCGACAGTCAGGTATCTGCCTCTTTCCGGTTCATGGCGAGTCATGACGGGCTGGAGGGGCTGCTGGTACT CCCTGAAATGAATCAGGATCAGGTTAAACGCCTATCCACGCTGGTTGCGGCACATATGAGCATGTGTCTTGATGCAGCCT GCGGTGATCTGTTTGTCAGTGATGATGTTAAACCAGAAGAAATTCGTCAGGCATGGGAAAGGGTTGCTGCAGAGGCCATG CGCCTTGAGGTCATCCCGCCTGCGTTTGAGCAGTTGCGCCGCAAAAAGCGCCGCCGTAAGCCGGTGCCTTATGAACTGAT CCCACCGTCGCTGGCCCGTATGCTGTGCGCGGACTGGTGGTATCGCAAATTGTGGCAGATGCGCTGCGAGTGGCGGGAGG AGCAGTTGCGCGCCGTCTGCCTGGTCAACAAGAAAGCCTCACCGTATGTCAGCTACGAAGCCGTGATCCACAAACGCGAG CAGCGCCGCAAATCGCTGGAGTTCTTCCGCTCGCATGAGCTGATCAACGAAGACGGCGACACGCTGGACATGGAAGACGT GGTGAACGCCAGCAACAGCAACCCGGCGCACCGCCGTAATGAAATGATGGCCTGTGTTAAGGGGCTGGAGCTGATCGCGG AAATGCGCGGAGACTGCGCGGTGTTTTATACCATCACCTGCCCGTCACGCTTCCACGCAACCCTCAACAACGGCAGGCCT AATCCGAAGTGGACCAGTGCCACTGTCCGGCAGAGCAGTGACTATCTGGTTGATACGTTCGCCGCTTTCCGCAAGGCAAT GCACAAGGCCGGGCTGCGCTGGTATGGCGTCCGCGTTGCAGAGCCGCACCATGACGGCACCGTGCACTGGCATCTTCTGT GCTTCATGCGCAAAAAAGACCGCCGTTCCATCACCGCGCTGTTGCGTAAGTTTGCCATCCGTGAAGACCGCGAGGAGCTG GGCGCCAATACCGGGCCGCGCTTCAAGCCCGAGCTAATCAACCCGCGCAAGGGTACGCCGACAAGCTACATCGCCAAATA CATCAGCAAGAACATCGACGGGCGCGGGCTGGCTAAAGAAATCAGCAAAGAAACCGGCAGATCACTGCGTGACAGCGCCG AGCATGTCAGCGCCTGGGCGTCACTGCATCGTGTCCAGCAGTTCCGTTTCTTTGGTATTCCGGGGCGTCAGGCATACCGC GAGCTGCGCTTGCTGGCTGGTCAGGCGGCGAGAGTGCAGGGCGAACGCAAAGCGGGTGCGCCGGTACTGGATAATCCGCG TCTGGATGCGGTACTGGCGGCGGCTGATGCGGGCTGCTTTGCCACCTATATCATGAAGCAGGGCGGTGTGCTGGTTCCCC GCAAACATCACCTTGTCCGCACGGCATATGAGCTTAACGATGAGCCGAGCGCCTACGGCGATCACGGTATCCGTATATAT GGCATCTGGTCCCCGATTGCGGAGGGCAAGATTTGCACGCACGCGGTGAAGTGGAAAAAGGTTCGTAAAGCCGTTGACGT TCAGGAGGCGGCAGCCGACCAGGGCGCTTGCGCCCCTTGGACTCGGACTCGTGGCAATAACTGTCCCCCTGTTGAAAATC TGAACAAATCAGGGGGTGATTTACCCGATATTAAAACCATGAATGAGAAGGAACTGCAGGATTATCTCCACAATATGGGC CAGAAGGAACGGCGGGAACTTACAGCCAGGTTGAGACTGGTAAAACCGAAGCGGAAAACAGTATACAAACAGAATATTTC GGAGCAGCAACGCCTGCAGCTTGAGGCAGAACTGACAGCCAGAGGGTTTGAAGGTAGTGCATCTGAGATTGATTTGCTTC TGCGTGGTGGCAGCATTCCGTCAGGTGCCGGGCTACGGATTTTTTACCGCAACCATCGACTGCAGGAAGATGACAAATGG CGTCAGTGA
Upstream 100 bases:
>100_bases GTAAATCTGCAACAGAAATCATCGCTACGAAGTTAGTGCGCTGGTTCGGTGTTGATTTGGCGTCTGGTCCTGATGTCTCG GTGGAAACTGAGGTGCGGGC
Downstream 100 bases:
>100_bases TACTGACGGCAAGGCTTTAACAATTCATGCTCTTAACGACCTTCGTAAGAACGTTCTCATTGACGGATAAAAAATATTTT ACTTTTGGATATCAGGGGTA
Product: hypothetical protein
Products: NA
Alternate protein names: Fels-2 prophage protein [H]
Number of amino acids: Translated: 802; Mature: 801
Protein sequence:
>802_residues MAVSKITLHYAQTTGGSNEAAAAFPWNTPKKAVNPYLDPAEFAPESALSNLIALYAVDNEQEQLRRETLSDEVWERYFFN ESRDPVQREMEQDRLINHAKTAREQQRFNPDLVIIANVGAQPAHISKPLLERIKYFHSLGRAKAYSRYLQKTIRPCLERL ERVRDSQVSASFRFMASHDGLEGLLVLPEMNQDQVKRLSTLVAAHMSMCLDAACGDLFVSDDVKPEEIRQAWERVAAEAM RLEVIPPAFEQLRRKKRRRKPVPYELIPPSLARMLCADWWYRKLWQMRCEWREEQLRAVCLVNKKASPYVSYEAVIHKRE QRRKSLEFFRSHELINEDGDTLDMEDVVNASNSNPAHRRNEMMACVKGLELIAEMRGDCAVFYTITCPSRFHATLNNGRP NPKWTSATVRQSSDYLVDTFAAFRKAMHKAGLRWYGVRVAEPHHDGTVHWHLLCFMRKKDRRSITALLRKFAIREDREEL GANTGPRFKPELINPRKGTPTSYIAKYISKNIDGRGLAKEISKETGRSLRDSAEHVSAWASLHRVQQFRFFGIPGRQAYR ELRLLAGQAARVQGERKAGAPVLDNPRLDAVLAAADAGCFATYIMKQGGVLVPRKHHLVRTAYELNDEPSAYGDHGIRIY GIWSPIAEGKICTHAVKWKKVRKAVDVQEAAADQGACAPWTRTRGNNCPPVENLNKSGGDLPDIKTMNEKELQDYLHNMG QKERRELTARLRLVKPKRKTVYKQNISEQQRLQLEAELTARGFEGSASEIDLLLRGGSIPSGAGLRIFYRNHRLQEDDKW RQ
Sequences:
>Translated_802_residues MAVSKITLHYAQTTGGSNEAAAAFPWNTPKKAVNPYLDPAEFAPESALSNLIALYAVDNEQEQLRRETLSDEVWERYFFN ESRDPVQREMEQDRLINHAKTAREQQRFNPDLVIIANVGAQPAHISKPLLERIKYFHSLGRAKAYSRYLQKTIRPCLERL ERVRDSQVSASFRFMASHDGLEGLLVLPEMNQDQVKRLSTLVAAHMSMCLDAACGDLFVSDDVKPEEIRQAWERVAAEAM RLEVIPPAFEQLRRKKRRRKPVPYELIPPSLARMLCADWWYRKLWQMRCEWREEQLRAVCLVNKKASPYVSYEAVIHKRE QRRKSLEFFRSHELINEDGDTLDMEDVVNASNSNPAHRRNEMMACVKGLELIAEMRGDCAVFYTITCPSRFHATLNNGRP NPKWTSATVRQSSDYLVDTFAAFRKAMHKAGLRWYGVRVAEPHHDGTVHWHLLCFMRKKDRRSITALLRKFAIREDREEL GANTGPRFKPELINPRKGTPTSYIAKYISKNIDGRGLAKEISKETGRSLRDSAEHVSAWASLHRVQQFRFFGIPGRQAYR ELRLLAGQAARVQGERKAGAPVLDNPRLDAVLAAADAGCFATYIMKQGGVLVPRKHHLVRTAYELNDEPSAYGDHGIRIY GIWSPIAEGKICTHAVKWKKVRKAVDVQEAAADQGACAPWTRTRGNNCPPVENLNKSGGDLPDIKTMNEKELQDYLHNMG QKERRELTARLRLVKPKRKTVYKQNISEQQRLQLEAELTARGFEGSASEIDLLLRGGSIPSGAGLRIFYRNHRLQEDDKW RQ >Mature_801_residues AVSKITLHYAQTTGGSNEAAAAFPWNTPKKAVNPYLDPAEFAPESALSNLIALYAVDNEQEQLRRETLSDEVWERYFFNE SRDPVQREMEQDRLINHAKTAREQQRFNPDLVIIANVGAQPAHISKPLLERIKYFHSLGRAKAYSRYLQKTIRPCLERLE RVRDSQVSASFRFMASHDGLEGLLVLPEMNQDQVKRLSTLVAAHMSMCLDAACGDLFVSDDVKPEEIRQAWERVAAEAMR LEVIPPAFEQLRRKKRRRKPVPYELIPPSLARMLCADWWYRKLWQMRCEWREEQLRAVCLVNKKASPYVSYEAVIHKREQ RRKSLEFFRSHELINEDGDTLDMEDVVNASNSNPAHRRNEMMACVKGLELIAEMRGDCAVFYTITCPSRFHATLNNGRPN PKWTSATVRQSSDYLVDTFAAFRKAMHKAGLRWYGVRVAEPHHDGTVHWHLLCFMRKKDRRSITALLRKFAIREDREELG ANTGPRFKPELINPRKGTPTSYIAKYISKNIDGRGLAKEISKETGRSLRDSAEHVSAWASLHRVQQFRFFGIPGRQAYRE LRLLAGQAARVQGERKAGAPVLDNPRLDAVLAAADAGCFATYIMKQGGVLVPRKHHLVRTAYELNDEPSAYGDHGIRIYG IWSPIAEGKICTHAVKWKKVRKAVDVQEAAADQGACAPWTRTRGNNCPPVENLNKSGGDLPDIKTMNEKELQDYLHNMGQ KERRELTARLRLVKPKRKTVYKQNISEQQRLQLEAELTARGFEGSASEIDLLLRGGSIPSGAGLRIFYRNHRLQEDDKWR Q
Specific function: Possible endonuclease which induces a single-strand cut and initiates DNA replication (Potential) [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the phage GPA family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR020220 - InterPro: IPR008766 - ProDom: PD092055 [H]
Pfam domain/function: PF05840 Phage_GPA [H]
EC number: NA
Molecular weight: Translated: 91787; Mature: 91656
Theoretical pI: Translated: 9.85; Mature: 9.85
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAVSKITLHYAQTTGGSNEAAAAFPWNTPKKAVNPYLDPAEFAPESALSNLIALYAVDNE CCCCEEEEEEEECCCCCCCCEEECCCCCCHHHCCCCCCCHHCCHHHHHHHEEEEEEECCH QEQLRRETLSDEVWERYFFNESRDPVQREMEQDRLINHAKTAREQQRFNPDLVIIANVGA HHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCC QPAHISKPLLERIKYFHSLGRAKAYSRYLQKTIRPCLERLERVRDSQVSASFRFMASHDG CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCC LEGLLVLPEMNQDQVKRLSTLVAAHMSMCLDAACGDLFVSDDVKPEEIRQAWERVAAEAM CCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHCCEEECCCCCHHHHHHHHHHHHHHHH RLEVIPPAFEQLRRKKRRRKPVPYELIPPSLARMLCADWWYRKLWQMRCEWREEQLRAVC HEECCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LVNKKASPYVSYEAVIHKREQRRKSLEFFRSHELINEDGDTLDMEDVVNASNSNPAHRRN EECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEECHHHHHCCCCCCCHHHHH EMMACVKGLELIAEMRGDCAVFYTITCPSRFHATLNNGRPNPKWTSATVRQSSDYLVDTF HHHHHHHHHHHHHHHCCCEEEEEEEECCHHHHHHHCCCCCCCCCCCHHHHCCCCHHHHHH AAFRKAMHKAGLRWYGVRVAEPHHDGTVHWHLLCFMRKKDRRSITALLRKFAIREDREEL HHHHHHHHHCCCEEEEEEEECCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GANTGPRFKPELINPRKGTPTSYIAKYISKNIDGRGLAKEISKETGRSLRDSAEHVSAWA CCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHCHHHHHHHHHHHHHH SLHRVQQFRFFGIPGRQAYRELRLLAGQAARVQGERKAGAPVLDNPRLDAVLAAADAGCF HHHHHHHHHHCCCCCHHHHHHHHHHHCHHHHHCCCCCCCCCCCCCCCHHHHHHHHCCHHH ATYIMKQGGVLVPRKHHLVRTAYELNDEPSAYGDHGIRIYGIWSPIAEGKICTHAVKWKK HHHHHHCCCEECCCHHHHHHHHHHCCCCCCCCCCCCEEEEEECCCCCCCCHHHHHHHHHH VRKAVDVQEAAADQGACAPWTRTRGNNCPPVENLNKSGGDLPDIKTMNEKELQDYLHNMG HHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCC QKERRELTARLRLVKPKRKTVYKQNISEQQRLQLEAELTARGFEGSASEIDLLLRGGSIP HHHHHHHHHHHHHCCCHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCHHEEEEEECCCCC SGAGLRIFYRNHRLQEDDKWRQ CCCCEEEEEECCCCCCCCCCCC >Mature Secondary Structure AVSKITLHYAQTTGGSNEAAAAFPWNTPKKAVNPYLDPAEFAPESALSNLIALYAVDNE CCCEEEEEEEECCCCCCCCEEECCCCCCHHHCCCCCCCHHCCHHHHHHHEEEEEEECCH QEQLRRETLSDEVWERYFFNESRDPVQREMEQDRLINHAKTAREQQRFNPDLVIIANVGA HHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCC QPAHISKPLLERIKYFHSLGRAKAYSRYLQKTIRPCLERLERVRDSQVSASFRFMASHDG CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCC LEGLLVLPEMNQDQVKRLSTLVAAHMSMCLDAACGDLFVSDDVKPEEIRQAWERVAAEAM CCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHCCEEECCCCCHHHHHHHHHHHHHHHH RLEVIPPAFEQLRRKKRRRKPVPYELIPPSLARMLCADWWYRKLWQMRCEWREEQLRAVC HEECCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LVNKKASPYVSYEAVIHKREQRRKSLEFFRSHELINEDGDTLDMEDVVNASNSNPAHRRN EECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEECHHHHHCCCCCCCHHHHH EMMACVKGLELIAEMRGDCAVFYTITCPSRFHATLNNGRPNPKWTSATVRQSSDYLVDTF HHHHHHHHHHHHHHHCCCEEEEEEEECCHHHHHHHCCCCCCCCCCCHHHHCCCCHHHHHH AAFRKAMHKAGLRWYGVRVAEPHHDGTVHWHLLCFMRKKDRRSITALLRKFAIREDREEL HHHHHHHHHCCCEEEEEEEECCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GANTGPRFKPELINPRKGTPTSYIAKYISKNIDGRGLAKEISKETGRSLRDSAEHVSAWA CCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHCHHHHHHHHHHHHHH SLHRVQQFRFFGIPGRQAYRELRLLAGQAARVQGERKAGAPVLDNPRLDAVLAAADAGCF HHHHHHHHHHCCCCCHHHHHHHHHHHCHHHHHCCCCCCCCCCCCCCCHHHHHHHHCCHHH ATYIMKQGGVLVPRKHHLVRTAYELNDEPSAYGDHGIRIYGIWSPIAEGKICTHAVKWKK HHHHHHCCCEECCCHHHHHHHHHHCCCCCCCCCCCCEEEEEECCCCCCCCHHHHHHHHHH VRKAVDVQEAAADQGACAPWTRTRGNNCPPVENLNKSGGDLPDIKTMNEKELQDYLHNMG HHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCC QKERRELTARLRLVKPKRKTVYKQNISEQQRLQLEAELTARGFEGSASEIDLLLRGGSIP HHHHHHHHHHHHHCCCHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCHHEEEEEECCCCC SGAGLRIFYRNHRLQEDDKWRQ CCCCEEEEEECCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 11677609 [H]