Definition Salmonella enterica subsp. enterica serovar Typhi str. Ty2 chromosome, complete genome.
Accession NC_004631
Length 4,791,961

Click here to switch to the map view.

The map label for this gene is 29144570

Identifier: 29144570

GI number: 29144570

Start: 4473524

End: 4473988

Strand: Reverse

Name: 29144570

Synonym: t4317

Alternate gene names: NA

Gene position: 4473988-4473524 (Counterclockwise)

Preceding gene: 29144571

Following gene: 29144569

Centisome position: 93.36

GC content: 59.35

Gene sequence:

>465_bases
ATGAAGTTTGTTGCGCCAGAACAGGCACCGGAACAGGCGGAGGTCATCAAAAATACGCCGTTCTGGCCTGATGTGAACCT
GTCGGAATTTCGCAGTGTGATGCGCACTGACGGCACGGTGACGCAGCCGCGTTTAAAGCAGGTCGTGCTGACGGCGATCT
CTGAGGTTAACGCTGAGCTGTACGACTTCCGCAACCGTCAGCAGATGCTGGGCTGGCGGACACTTGCTGAGGTTCCCGCA
GAAATGCTGGACGGTAAAAGCGAGCGTATCCGGCACTACCACAACGCTGTTTTTTGCTGGGCGCGCGCTGTGCTTAATGA
GCGTTATCAGGACTATGACGCCACGGCGTCAGGCGTGAAGCGAGGGGAGGAGCTGGCGGAGGCCAGCGGCGATCTGTGGC
GTGATGCCCGCTGGGCCATCAGCCGGGTGCAGGATGCACCGCACTGTACGGTGGAGCTTATCTGA

Upstream 100 bases:

>100_bases
CCGCTAACGAACGTGCCCCGCGCACGGGCGGCACGGGATGGCGAAAGGCACTGCCACATCAAAATTCCGTCCACCGCCCA
CTTATTCAGGAGAACGCCGC

Downstream 100 bases:

>100_bases
TGAAAGTGCGTGCGCATCAGTATGACACGGTGGACGCGCTTTGCTGGCGTCATTACGGGCGCACGCAGGGTGTCACTGAG
CAGGTTCTGCAGGCAAATCC

Product: capsid completion protein

Products: NA

Alternate protein names: Phage Head Completion; Head Completion/Stabilization Protein; Capsid Completion Protein; Phage Head Completion Protein; Phage Head Completion/Stabilization Protein; Fels-2 Prophage Protein; Head Completion/Stabilization Protein L; Bacteriophage Protein; Phage P2 Capsid Completion GpL-Like Protein; Phage-Related Capsid Completion Protein; Phage Head Completion Protein L; Bacteriophage Head Completion Protein L; Phage-Related Head Completion/Stabilization Protein; Prophage Phage Head Completion Protein; Bacteriophage P2 GPL Capsid Protein; Phage Head Completion Protein GpL

Number of amino acids: Translated: 154; Mature: 154

Protein sequence:

>154_residues
MKFVAPEQAPEQAEVIKNTPFWPDVNLSEFRSVMRTDGTVTQPRLKQVVLTAISEVNAELYDFRNRQQMLGWRTLAEVPA
EMLDGKSERIRHYHNAVFCWARAVLNERYQDYDATASGVKRGEELAEASGDLWRDARWAISRVQDAPHCTVELI

Sequences:

>Translated_154_residues
MKFVAPEQAPEQAEVIKNTPFWPDVNLSEFRSVMRTDGTVTQPRLKQVVLTAISEVNAELYDFRNRQQMLGWRTLAEVPA
EMLDGKSERIRHYHNAVFCWARAVLNERYQDYDATASGVKRGEELAEASGDLWRDARWAISRVQDAPHCTVELI
>Mature_154_residues
MKFVAPEQAPEQAEVIKNTPFWPDVNLSEFRSVMRTDGTVTQPRLKQVVLTAISEVNAELYDFRNRQQMLGWRTLAEVPA
EMLDGKSERIRHYHNAVFCWARAVLNERYQDYDATASGVKRGEELAEASGDLWRDARWAISRVQDAPHCTVELI

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17708; Mature: 17708

Theoretical pI: Translated: 5.31; Mature: 5.31

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKFVAPEQAPEQAEVIKNTPFWPDVNLSEFRSVMRTDGTVTQPRLKQVVLTAISEVNAEL
CCCCCCCCCCHHHHHHHCCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHH
YDFRNRQQMLGWRTLAEVPAEMLDGKSERIRHYHNAVFCWARAVLNERYQDYDATASGVK
HHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RGEELAEASGDLWRDARWAISRVQDAPHCTVELI
HHHHHHHHCCHHHHHHHHHHHHHCCCCCCEEEEC
>Mature Secondary Structure
MKFVAPEQAPEQAEVIKNTPFWPDVNLSEFRSVMRTDGTVTQPRLKQVVLTAISEVNAEL
CCCCCCCCCCHHHHHHHCCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHH
YDFRNRQQMLGWRTLAEVPAEMLDGKSERIRHYHNAVFCWARAVLNERYQDYDATASGVK
HHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RGEELAEASGDLWRDARWAISRVQDAPHCTVELI
HHHHHHHHCCHHHHHHHHHHHHHCCCCCCEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA