Definition | Salmonella enterica subsp. enterica serovar Typhi str. Ty2 chromosome, complete genome. |
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Accession | NC_004631 |
Length | 4,791,961 |
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The map label for this gene is 29144561
Identifier: 29144561
GI number: 29144561
Start: 4468941
End: 4469849
Strand: Reverse
Name: 29144561
Synonym: t4307
Alternate gene names: NA
Gene position: 4469849-4468941 (Counterclockwise)
Preceding gene: 29144562
Following gene: 29144560
Centisome position: 93.28
GC content: 58.75
Gene sequence:
>909_bases ATGGCAGTGATTGACCTTTCCCGGCTGCCCGCGCCGCAGATAGTGGACGTGCCGGATTTTGAGACGCTGCTGGCTGAGCG CAAGGCCGCTTTTGTGGCTCTTTATCCTGTGGATGAACAGGACGCGGTGCGGCGCACGCTGGCGCTGGAATCTGAACCCG TCACCAAGCTGCTGCAGGAAAGCACATACCGCGAAATCCTGCTGCGCCAGCGTATTAACGAGGCTGCGCAGGCGGTGATG GTGGCCTATTCGATGGGAAATGATCTTGAGCAGCTGGCAGCCAACTGCAACGTGAAACGCCTGACTGTAGTGCCTGCTGA TAATGATGCAGTACCGCCGGTCGCCGCAGTGATGGAAGATGATGAGGCGCTACGCCAGCGCATCCCTGCTGCGTTTGAGG GGTTGTCGGTTGCTGGCCCGACGGGAGCCTATGAATTTCACGCCAGAAGTGCGGACGGACGTGTGGCAGATGCCAGTGCA ACCAGTCCGGCACCTGCAGAGGTGGTGCTGACTGTCCTGAGCCGCGAAGGCGATGGAACAGCAGAAAAAGACCTGCTGGA CGTGGTGGAAAAAGCTCTGAACAGTGAGAACGTCCGCCCGGTGGCTGACCGTCTTACGGTTCGCAGCGCAGAAATCATCC CGTACCGGGTGGAAGCCACTATTTTTCTCTATCCGGGACCGGAAGCAGAGCCGGTAATGGCAGCGGCAAAAGCCAGCCTG CAGAAGTACATCGCCAGTCAGACGCGTCTTGGTCGGGATATTCGCCGTAGCGCCATCTTTGCCGCCCTGCATGTTGAGGG TGTGCAGCGTGTGGAGCTGGCTTCTCCTCTGGCGGATATGGTCCTGAACAAAACACAGGCGGCATCATGTACGCAGTGGA GCGTAACCAACGGAGGAACGGATGAATAG
Upstream 100 bases:
>100_bases ACCATCAACGGCAATTTTGACGGCTCTATGGTGGTTGAGCTTACCGGGCAGCGCAACAACGGCGCGCCGGTTTCACTTTC GGTAACTACAGGAGCAGACA
Downstream 100 bases:
>100_bases TCTGCTGCCACCGGGTTCAACACCACTGGAGCGCCGATTGGCGCAAACCTGCAGCGGGATTTCTGATCTGCAGGTGCCGC TTCGTGACTTGTGGAATCCG
Product: phage baseplate assembly protein
Products: NA
Alternate protein names: Baseplate Assembly Protein J; Baseplate J-Like Protein; Phage Baseplate Assembly Protein; Phage-Related Baseplate Assembly Protein; Bacteriophage Baseplate Assembly Protein; Bacteriophage Tail Fiber Protein; Phage Protein Gp; Phage Baseplate Assembly Protein J; Pyocin R2_PP Baseplate/Tail Fiber Protein; Bacteriophage Baseplate Assembly Protein J; Phage Baseplate Protein; Phage Baseplate J-Like Protein; Bacteriophage P2 Baseplate Assembly Protein GPJ; Prophage LambdaW5 Baseplate Assembly Protein J; Baseplate Assembly Protein GpJ; Baseplate Assembly Protein J Prophage; Baseplate Assembly-Like Protein; Baseplate Assembly Protein; Bacteriophage Baseplate Protein; Baseplate Protein Putative Phage Associated Protein; Prophage LambdaW1 Baseplate Assembly Protein J; Phage Baseplate Assembly; Phage Baseplate Assembly Protein GpJ; Phage Tail Protein; Prophage; GPJ Of Phage P2-Like; Phage P2 Baseplate Assembly Protein; Phage Baseplate-Like Protein; Phage Tail-Like Protein; Bacteriophage Protein; Phage P2 Baseplate Assembly GpJ-Like Protein; Prophage Baseplate Assembly Protein
Number of amino acids: Translated: 302; Mature: 301
Protein sequence:
>302_residues MAVIDLSRLPAPQIVDVPDFETLLAERKAAFVALYPVDEQDAVRRTLALESEPVTKLLQESTYREILLRQRINEAAQAVM VAYSMGNDLEQLAANCNVKRLTVVPADNDAVPPVAAVMEDDEALRQRIPAAFEGLSVAGPTGAYEFHARSADGRVADASA TSPAPAEVVLTVLSREGDGTAEKDLLDVVEKALNSENVRPVADRLTVRSAEIIPYRVEATIFLYPGPEAEPVMAAAKASL QKYIASQTRLGRDIRRSAIFAALHVEGVQRVELASPLADMVLNKTQAASCTQWSVTNGGTDE
Sequences:
>Translated_302_residues MAVIDLSRLPAPQIVDVPDFETLLAERKAAFVALYPVDEQDAVRRTLALESEPVTKLLQESTYREILLRQRINEAAQAVM VAYSMGNDLEQLAANCNVKRLTVVPADNDAVPPVAAVMEDDEALRQRIPAAFEGLSVAGPTGAYEFHARSADGRVADASA TSPAPAEVVLTVLSREGDGTAEKDLLDVVEKALNSENVRPVADRLTVRSAEIIPYRVEATIFLYPGPEAEPVMAAAKASL QKYIASQTRLGRDIRRSAIFAALHVEGVQRVELASPLADMVLNKTQAASCTQWSVTNGGTDE >Mature_301_residues AVIDLSRLPAPQIVDVPDFETLLAERKAAFVALYPVDEQDAVRRTLALESEPVTKLLQESTYREILLRQRINEAAQAVMV AYSMGNDLEQLAANCNVKRLTVVPADNDAVPPVAAVMEDDEALRQRIPAAFEGLSVAGPTGAYEFHARSADGRVADASAT SPAPAEVVLTVLSREGDGTAEKDLLDVVEKALNSENVRPVADRLTVRSAEIIPYRVEATIFLYPGPEAEPVMAAAKASLQ KYIASQTRLGRDIRRSAIFAALHVEGVQRVELASPLADMVLNKTQAASCTQWSVTNGGTDE
Specific function: Unknown
COG id: COG3948
COG function: function code R; Phage-related baseplate assembly protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32579; Mature: 32448
Theoretical pI: Translated: 4.45; Mature: 4.45
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAVIDLSRLPAPQIVDVPDFETLLAERKAAFVALYPVDEQDAVRRTLALESEPVTKLLQE CCEEECCCCCCCCEECCCCHHHHHHHCCCEEEEEECCCCHHHHHHHHHCCCCHHHHHHHH STYREILLRQRINEAAQAVMVAYSMGNDLEQLAANCNVKRLTVVPADNDAVPPVAAVMED HHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCEEEEEEECCCCCCCCHHHHHCC DEALRQRIPAAFEGLSVAGPTGAYEFHARSADGRVADASATSPAPAEVVLTVLSREGDGT HHHHHHHCCHHHCCCCCCCCCCCEEEEECCCCCCEECCCCCCCCHHHHHHHHHHCCCCCC AEKDLLDVVEKALNSENVRPVADRLTVRSAEIIPYRVEATIFLYPGPEAEPVMAAAKASL HHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCEEEEEEEEEEEEECCCCCCHHHHHHHHHH QKYIASQTRLGRDIRRSAIFAALHVEGVQRVELASPLADMVLNKTQAASCTQWSVTNGGT HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEECCCCCC DE CC >Mature Secondary Structure AVIDLSRLPAPQIVDVPDFETLLAERKAAFVALYPVDEQDAVRRTLALESEPVTKLLQE CEEECCCCCCCCEECCCCHHHHHHHCCCEEEEEECCCCHHHHHHHHHCCCCHHHHHHHH STYREILLRQRINEAAQAVMVAYSMGNDLEQLAANCNVKRLTVVPADNDAVPPVAAVMED HHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCEEEEEEECCCCCCCCHHHHHCC DEALRQRIPAAFEGLSVAGPTGAYEFHARSADGRVADASATSPAPAEVVLTVLSREGDGT HHHHHHHCCHHHCCCCCCCCCCCEEEEECCCCCCEECCCCCCCCHHHHHHHHHHCCCCCC AEKDLLDVVEKALNSENVRPVADRLTVRSAEIIPYRVEATIFLYPGPEAEPVMAAAKASL HHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCEEEEEEEEEEEEECCCCCCHHHHHHHHHH QKYIASQTRLGRDIRRSAIFAALHVEGVQRVELASPLADMVLNKTQAASCTQWSVTNGGT HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEECCCCCC DE CC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA