Definition | Salmonella enterica subsp. enterica serovar Typhi str. Ty2 chromosome, complete genome. |
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Accession | NC_004631 |
Length | 4,791,961 |
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The map label for this gene is 29144556
Identifier: 29144556
GI number: 29144556
Start: 4463686
End: 4464858
Strand: Reverse
Name: 29144556
Synonym: t4301
Alternate gene names: NA
Gene position: 4464858-4463686 (Counterclockwise)
Preceding gene: 29144558
Following gene: 29144555
Centisome position: 93.17
GC content: 58.14
Gene sequence:
>1173_bases ATGGCTCAGGATTACCACCACGGGGTGCGCGTTGTTGAAATCAACGAGGGCACCCGACCTATTACCACGGTGAGCACTGC CATCGTGGGCATGGTCTGCACCGGCGATGATGCTGATGCGTCCGTGTTCCCCATCAATAAGCCTGTCCTGCTGACTGATG TGCTCACCGCCAGCGGTAAAGCGGGGGAGTCCGGCACGCTGGCCCGCTCGCTGGACGCGATTGCAGATCAGGCAAAACCC GTGACTGTCGTTGTGCGTGTGGCGCAGGGCGAAACCGAAGCGGAAACCACCTCCAATATTATCGGCGGCGTAACTTCCGA CGGTAAGAAAACGGGCATGAAAGCGCTACTGTCGGCGCAGTCGCAGCTCGGTGTCAAGCCGCGCATTCTTGGGGTGCCGG GACATGACACTCAGGCCGTTGCTACTGAACTGCTGGGCGTGGCGCAAAGCTTGCGCGGGTTTGCCTACCTTGCTGCTAAT GGCTGCAAAACGGTGGAGGAAGCTATTGCCTATCGCGAGAATTTCAGTCAGCGCGAGGGAATGCTGATCTGGCCTGACTT CATCAACTTTGACACCGTGCTGAAAGCAGACGCGACGGCTTACGCCTCCGCCCGTGCGCTCGGCCTGCGTGCCAAAATCG ACGAGCAGATCGGCTGGCATAAAACCCTGTCCAATGTGGGTGTGAACGGTGTCACCGGCATTTCCGCTGATGTGTTCTGG GATCTGCAGGACCCGGCAACCGATGCGGGACTGCTGAACAAAAATGACGTCACCACATTGATCCGCAAAGACGGCTTCCG CTTCTGGGGGTCCCGTTGTCTCAGTGACGATCCGCTGTTTGCCTTTGAGAACTACACCCGCACGGCGCAGGTGCTGGCTG ACACTATGGCGGAGGCGCACATGTGGGCGGTGGATGGCGTGCTTAATCCGTCGCTGGCCCGCGACATTATTGAAGGACTA CGCGCCAAGATGCGCAGTCTGGTCAACCAGGGATACCTGATTGGTGGTGACTGCTGGCTGGATGAGTCTGTTAACGATAA AGACACCCTTAAAGCCGGGAAACTGACCATCGATTATGACTACACGCCGGTGCCTCCGCTTGAAAACCTGATGCTGCGCC AGCGCATCACCGATCGTTACCTGGTCGATTTTGCCAGCCGTGTCGCTGCATAA
Upstream 100 bases:
>100_bases GTGGCGATATTGTACCAGCACTGACACATCGTGAAATACGTGCGCCGCACGCCTGGCAACCAGAACATAAGGTATCCCTG TCAACCGGAGAGACTGCCTT
Downstream 100 bases:
>100_bases GGGGGAATCATGGCTTTACCACGCAAGTTAAAACACCTGAACCTGTTCAACGACGGGAACAACTGGCAGGGGATCGTTGA GTCCCTGACCCTGCCGAAAT
Product: major tail sheath protein
Products: NA
Alternate protein names: Phage Tail Sheath Protein; Bacteriophage Tail Sheath Protein; Phage Tail Sheath Protein; Phage Tail Sheath Protein FI; Tail Sheath Protein FI; Phage-Related Tail Sheath Protein; Tail Sheath Protein Bacteriophage; Bacteriophage Tail Sheath Protein; Phage-Related Tail Protein; Bacteriophage P2 Tail Sheath Protein GPFI; Pyocin R2_PP Tail Sheath Protein GpFI; Phage TAIL SHEATH PROTEIN; Pyocin R2_PP Tail Sheath Protein; Phage Tail Sheath-Like Protein; Prophage; Bacteriophage Tail Sheath Protein FI; Phage-Related Tail Sheath Protein; Prophage Tail Sheath; Phage P2 Tail Sheath FI-Like Protein; Bacteriophage Contractile Tail Sheath Protein; Bacteriophage P2 Tail Sheath Protein
Number of amino acids: Translated: 390; Mature: 389
Protein sequence:
>390_residues MAQDYHHGVRVVEINEGTRPITTVSTAIVGMVCTGDDADASVFPINKPVLLTDVLTASGKAGESGTLARSLDAIADQAKP VTVVVRVAQGETEAETTSNIIGGVTSDGKKTGMKALLSAQSQLGVKPRILGVPGHDTQAVATELLGVAQSLRGFAYLAAN GCKTVEEAIAYRENFSQREGMLIWPDFINFDTVLKADATAYASARALGLRAKIDEQIGWHKTLSNVGVNGVTGISADVFW DLQDPATDAGLLNKNDVTTLIRKDGFRFWGSRCLSDDPLFAFENYTRTAQVLADTMAEAHMWAVDGVLNPSLARDIIEGL RAKMRSLVNQGYLIGGDCWLDESVNDKDTLKAGKLTIDYDYTPVPPLENLMLRQRITDRYLVDFASRVAA
Sequences:
>Translated_390_residues MAQDYHHGVRVVEINEGTRPITTVSTAIVGMVCTGDDADASVFPINKPVLLTDVLTASGKAGESGTLARSLDAIADQAKP VTVVVRVAQGETEAETTSNIIGGVTSDGKKTGMKALLSAQSQLGVKPRILGVPGHDTQAVATELLGVAQSLRGFAYLAAN GCKTVEEAIAYRENFSQREGMLIWPDFINFDTVLKADATAYASARALGLRAKIDEQIGWHKTLSNVGVNGVTGISADVFW DLQDPATDAGLLNKNDVTTLIRKDGFRFWGSRCLSDDPLFAFENYTRTAQVLADTMAEAHMWAVDGVLNPSLARDIIEGL RAKMRSLVNQGYLIGGDCWLDESVNDKDTLKAGKLTIDYDYTPVPPLENLMLRQRITDRYLVDFASRVAA >Mature_389_residues AQDYHHGVRVVEINEGTRPITTVSTAIVGMVCTGDDADASVFPINKPVLLTDVLTASGKAGESGTLARSLDAIADQAKPV TVVVRVAQGETEAETTSNIIGGVTSDGKKTGMKALLSAQSQLGVKPRILGVPGHDTQAVATELLGVAQSLRGFAYLAANG CKTVEEAIAYRENFSQREGMLIWPDFINFDTVLKADATAYASARALGLRAKIDEQIGWHKTLSNVGVNGVTGISADVFWD LQDPATDAGLLNKNDVTTLIRKDGFRFWGSRCLSDDPLFAFENYTRTAQVLADTMAEAHMWAVDGVLNPSLARDIIEGLR AKMRSLVNQGYLIGGDCWLDESVNDKDTLKAGKLTIDYDYTPVPPLENLMLRQRITDRYLVDFASRVAA
Specific function: Unknown
COG id: COG3497
COG function: function code R; Phage tail sheath protein FI
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 42054; Mature: 41923
Theoretical pI: Translated: 4.83; Mature: 4.83
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAQDYHHGVRVVEINEGTRPITTVSTAIVGMVCTGDDADASVFPINKPVLLTDVLTASGK CCCCCCCCEEEEEECCCCCCHHHHHHHHEEEEEECCCCCCEEEECCCCEEEEHHHHCCCC AGESGTLARSLDAIADQAKPVTVVVRVAQGETEAETTSNIIGGVTSDGKKTGMKALLSAQ CCCCCHHHHHHHHHHHCCCCEEEEEEEECCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHH SQLGVKPRILGVPGHDTQAVATELLGVAQSLRGFAYLAANGCKTVEEAIAYRENFSQREG HHCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHEEEEECCCHHHHHHHHHHHHCHHHCCC MLIWPDFINFDTVLKADATAYASARALGLRAKIDEQIGWHKTLSNVGVNGVTGISADVFW EEEECCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCCCCCCEEEE DLQDPATDAGLLNKNDVTTLIRKDGFRFWGSRCLSDDPLFAFENYTRTAQVLADTMAEAH ECCCCCCCCCCCCCCHHHHHHHHCCHHHHHHHCCCCCCCEEECCHHHHHHHHHHHHHHHH MWAVDGVLNPSLARDIIEGLRAKMRSLVNQGYLIGGDCWLDESVNDKDTLKAGKLTIDYD HHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCEEEECCEEECCCCCCHHHHEECCEEEECC YTPVPPLENLMLRQRITDRYLVDFASRVAA CCCCCCHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure AQDYHHGVRVVEINEGTRPITTVSTAIVGMVCTGDDADASVFPINKPVLLTDVLTASGK CCCCCCCEEEEEECCCCCCHHHHHHHHEEEEEECCCCCCEEEECCCCEEEEHHHHCCCC AGESGTLARSLDAIADQAKPVTVVVRVAQGETEAETTSNIIGGVTSDGKKTGMKALLSAQ CCCCCHHHHHHHHHHHCCCCEEEEEEEECCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHH SQLGVKPRILGVPGHDTQAVATELLGVAQSLRGFAYLAANGCKTVEEAIAYRENFSQREG HHCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHEEEEECCCHHHHHHHHHHHHCHHHCCC MLIWPDFINFDTVLKADATAYASARALGLRAKIDEQIGWHKTLSNVGVNGVTGISADVFW EEEECCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCCCCCCEEEE DLQDPATDAGLLNKNDVTTLIRKDGFRFWGSRCLSDDPLFAFENYTRTAQVLADTMAEAH ECCCCCCCCCCCCCCHHHHHHHHCCHHHHHHHCCCCCCCEEECCHHHHHHHHHHHHHHHH MWAVDGVLNPSLARDIIEGLRAKMRSLVNQGYLIGGDCWLDESVNDKDTLKAGKLTIDYD HHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCEEEECCEEECCCCCCHHHHEECCEEEECC YTPVPPLENLMLRQRITDRYLVDFASRVAA CCCCCCHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA