| Definition | Salmonella enterica subsp. enterica serovar Typhi str. Ty2 chromosome, complete genome. |
|---|---|
| Accession | NC_004631 |
| Length | 4,791,961 |
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The map label for this gene is lpxO
Identifier: 29144455
GI number: 29144455
Start: 4357620
End: 4358528
Strand: Reverse
Name: lpxO
Synonym: t4193
Alternate gene names: NA
Gene position: 4358528-4357620 (Counterclockwise)
Preceding gene: 29144456
Following gene: 29144454
Centisome position: 90.95
GC content: 50.83
Gene sequence:
>909_bases ATGTTCGCAGCAATCATTATCGGTATTTTTATTATCAGCGTCATTTATGCGCATTCACGCGGGGTGGAAAAACAAAAACT TTCCCGTCAGCTCTTTGACCACTCGACGTTTATGGCGCCGATCAATATGTTCATGACTCGCTTCTCAACGTTACCGGCAA AGCAGCCGTACTTTGATACCACGGCATTTCCAGAGCTGCAGAAGCTGACGGAAAACTGGCAGGTGATTCGTGAAGAGGCG CTACGGCTTCAGCATCACATAAAAGCCGCGCAGGCCAATAACGACGCCGGATTCAACACCTTTTTCAAGCGCGGCTGGAA ACGGTTTTATCTTAAATGGTATTCCGATGCCCACCCGTCGGCAGAAACGTTATGCCCGATAACGACAAAGCTGGTCAACA GCATCCCCTCTATCAAAGCGGCGATGTTCGCCGAGTTGCCTCCCGGGGCCTATCTGGGAAAACATCGCGACCCCTATGCC GGTTCAGTACGTTACCATCTTGGATTAAGCACACCGAATGATGACCGCTGTTTTATTGAAGTTGATCGACAGCGCCATAG CTGGCGCGACGGCGAAGCCGTCATCTTCGACGAAACCTACGTTCATTGGGCGGAAAATAAAACTGAGCAGACGCGTATTA TCCTCTTTTGCGATATTGAGCGCCCAATGAAATGGCGCTGGGCGCAGAGCGTAAACCACTGGGTCGGCGCATCGTTGATG TCCGCCGCCAGTTCGCCAAACGACGAGAACGATCGCACCGGTGCGATTAATCGCATCTTTAAATACGTTCACGCAGCACG CGATGCCGGGCAACGGCTGAAAAAGAAAAACCGTACTCTCTATTACGCGCTGAAATATCTCGTTATTGCCGCTATTTTTG CCGCGATAATCCTTTTCAGCCTCCTCTGA
Upstream 100 bases:
>100_bases GTAAATTTATTGTCAACGAACTACACTTTTCTCTTTGGCATCACCGGGAGGGTTGCCTGAAAATCCCGGGATGAGGTTTT CTTAGAAGGACAGTGACGTT
Downstream 100 bases:
>100_bases AGCCGGGCCACGGTATGAAACTGCCTGCCGCGGCCTGTTCTATCCTGGCGTTAGTCTCAAAGCGTTCCCTGACCTTGAGT CTATCCATCCGGATAATATC
Product: membrane-bound beta-hydroxylase
Products: NA
Alternate protein names: Beta-Hydroxylase; Membrane-Bound Beta-Hydroxylase; Asparaginyl Beta-Hydroxylase; Aspartyl/Asparaginyl Beta-Hydroxylase Family Protein; Aspartyl-Asparaginyl Beta-Hydroxylase; Aspartyl/Asparaginyl Beta-Hydroxylase Family; Lipopolysaccharide Biosynthetic; Peptide-Aspartate Beta-Dioxygenase; Hydroxylase; Lipid A-Myristate Beta-Hydroxylase; Peptide-Aspartate B-Dioxygenase; Aspartate Beta-Hydroxylase; Aspartyl/Asparaginyl Beta-Hydroxylase Transmembrane Protein; Lipopolysaccharide Biosynthetic Protein; Beta-Hydroxylase Aspartyl/Asparaginyl Family; Fe(2+)/Alpha-Ketoglutarate-Dependent Dioxygenase LpxO; Peptide Aspartate B-Dioxygenase; Dioxygenase; Aspartyl/Asparaginyl Beta-Hydroxylase Protein; Aspartyl/Asparaginyl-Beta-Hydroxylase
Number of amino acids: Translated: 302; Mature: 302
Protein sequence:
>302_residues MFAAIIIGIFIISVIYAHSRGVEKQKLSRQLFDHSTFMAPINMFMTRFSTLPAKQPYFDTTAFPELQKLTENWQVIREEA LRLQHHIKAAQANNDAGFNTFFKRGWKRFYLKWYSDAHPSAETLCPITTKLVNSIPSIKAAMFAELPPGAYLGKHRDPYA GSVRYHLGLSTPNDDRCFIEVDRQRHSWRDGEAVIFDETYVHWAENKTEQTRIILFCDIERPMKWRWAQSVNHWVGASLM SAASSPNDENDRTGAINRIFKYVHAARDAGQRLKKKNRTLYYALKYLVIAAIFAAIILFSLL
Sequences:
>Translated_302_residues MFAAIIIGIFIISVIYAHSRGVEKQKLSRQLFDHSTFMAPINMFMTRFSTLPAKQPYFDTTAFPELQKLTENWQVIREEA LRLQHHIKAAQANNDAGFNTFFKRGWKRFYLKWYSDAHPSAETLCPITTKLVNSIPSIKAAMFAELPPGAYLGKHRDPYA GSVRYHLGLSTPNDDRCFIEVDRQRHSWRDGEAVIFDETYVHWAENKTEQTRIILFCDIERPMKWRWAQSVNHWVGASLM SAASSPNDENDRTGAINRIFKYVHAARDAGQRLKKKNRTLYYALKYLVIAAIFAAIILFSLL >Mature_302_residues MFAAIIIGIFIISVIYAHSRGVEKQKLSRQLFDHSTFMAPINMFMTRFSTLPAKQPYFDTTAFPELQKLTENWQVIREEA LRLQHHIKAAQANNDAGFNTFFKRGWKRFYLKWYSDAHPSAETLCPITTKLVNSIPSIKAAMFAELPPGAYLGKHRDPYA GSVRYHLGLSTPNDDRCFIEVDRQRHSWRDGEAVIFDETYVHWAENKTEQTRIILFCDIERPMKWRWAQSVNHWVGASLM SAASSPNDENDRTGAINRIFKYVHAARDAGQRLKKKNRTLYYALKYLVIAAIFAAIILFSLL
Specific function: Unknown
COG id: COG3555
COG function: function code O; Aspartyl/asparaginyl beta-hydroxylase and related dioxygenases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34883; Mature: 34883
Theoretical pI: Translated: 9.94; Mature: 9.94
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFAAIIIGIFIISVIYAHSRGVEKQKLSRQLFDHSTFMAPINMFMTRFSTLPAKQPYFDT CHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC TAFPELQKLTENWQVIREEALRLQHHIKAAQANNDAGFNTFFKRGWKRFYLKWYSDAHPS CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCC AETLCPITTKLVNSIPSIKAAMFAELPPGAYLGKHRDPYAGSVRYHLGLSTPNDDRCFIE CHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCEEEEE VDRQRHSWRDGEAVIFDETYVHWAENKTEQTRIILFCDIERPMKWRWAQSVNHWVGASLM ECCHHCCCCCCCEEEEECCEEEECCCCCCCEEEEEEEECCCCHHHHHHHHHHHHHHHHHH SAASSPNDENDRTGAINRIFKYVHAARDAGQRLKKKNRTLYYALKYLVIAAIFAAIILFS HHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH LL HC >Mature Secondary Structure MFAAIIIGIFIISVIYAHSRGVEKQKLSRQLFDHSTFMAPINMFMTRFSTLPAKQPYFDT CHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC TAFPELQKLTENWQVIREEALRLQHHIKAAQANNDAGFNTFFKRGWKRFYLKWYSDAHPS CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCC AETLCPITTKLVNSIPSIKAAMFAELPPGAYLGKHRDPYAGSVRYHLGLSTPNDDRCFIE CHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCEEEEE VDRQRHSWRDGEAVIFDETYVHWAENKTEQTRIILFCDIERPMKWRWAQSVNHWVGASLM ECCHHCCCCCCCEEEEECCEEEECCCCCCCEEEEEEEECCCCHHHHHHHHHHHHHHHHHH SAASSPNDENDRTGAINRIFKYVHAARDAGQRLKKKNRTLYYALKYLVIAAIFAAIILFS HHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH LL HC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA