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The map label for this gene is 29144426

Identifier: 29144426

GI number: 29144426

Start: 4309650

End: 4310957

Strand: Direct

Name: 29144426

Synonym: t4164

Alternate gene names: NA

Gene position: 4309650-4310957 (Clockwise)

Preceding gene: 29144425

Following gene: 29144427

Centisome position: 89.93

GC content: 36.54

Gene sequence:

>1308_bases
ATGAAGATTAAGATGTTTTTTCTGACGACTGCTTTTATTACACAAAGCACATACGCCAGCGAGCTTCCGGTCATTCCTCT
AAGAGATTTAGTTAATGCCGCATTAACGCATCAGCCCTCTGTTGCTGTTTCATATTATGAGACTGAAAAGAAAAACAGTG
ACTTAGATCTTTCACGGGCAGCACTTTATCCTACCCTGGATCTAACCTCTGGCCTTAATAATAACAGAAAGGAGTCGTCA
GGTACCGAGAGAAACGTTGAAAATAAGGTATCTTTATCATACCGAATAACGGATTTTGGAGTGAGGGGGGCTAATATCAG
GAAATCTGAATACGAAAGAGATAATAGTAAAACTGACTATGAAAAAACAAAGAATATAGTGTCTCAGGAGGTTGTGACAA
CCTATTACAACATCAGTAAATATCGTGAAATGATTGATGGCGTAAATCTGGAGAAAGAGTTTTATAAAAAGATGCTGGAA
ACTTTTTCGCTACTGGTATCTTCCGGTGTAGCTATGCAATCTGATATGCGTAAAGTACAAGTATCTATCGATGCATTAAA
TACCAGAAGTATTATGTATCAGTCGATGCTGGATGATGAAATGTATAAAATGCAGAATATGACTGGTCTGAATTTATCAC
CAGATCAGATTCAAAGCGATGAAAAATTCAACCTCTTCAAAAAATATATCTTTGTCGAAAGCCCTGAAAAACTTATGGAC
ATGGTGATGAAATACAACGATGACTATAAGATGCTTGTCAATACCCGAAAAGCTGCGACCGAAGATATTAATGCCGCAAA
ATCATCCTATTTTCCGACTGTAGATCTCGTTTCCAGCTATGTACAGAATAATCCGAGCGGTAGTGCCAAAAAAAGTGATT
ATGAAGATGAATTTAAAACGGGTATCAATGTCAGTTTCAACATTTTTAATGGGTTTAGAAATGCAGCCCAGGAAAGAAAA
ATGGTGGCAAGTTACTCGCAGGCTAAGCTGCAAATTGACGATTTCTTGATTAAAACTCGTTATAACATTGATTCACAACT
TTCAAAATACACCGCTGCAAAAGAGACTTACTCAGTGGCGGAACGTTCACATACAAACGCGTTACAGCTTACTGAATTAT
ATGAGCAGGAGTTTCAGTTAGGGCAAAAAAGTTTGCTTGATTTAATTTCAAGCCGTAATGAAGCATTTCAGGCATATGTA
AGCATGATCGACAGCAAATATAGCCTGTATATTTTAAAGCTACAGCAACTCTCATTGATTTTTCATTTAATGGATTATTT
AAAAAGTGAGTTAAATGTAATGAAATGA

Upstream 100 bases:

>100_bases
ATGGTTAGCTATCGTGATACCTATATGCCATTAATGGAAAAAATAACATCTATGCATCAGGAAATAGTAAAGCAACGTTT
GTTAAACAAGGAGGAAAAAA

Downstream 100 bases:

>100_bases
ATAGAAGACAAAGCGATCATCTCATGATGATAATTATTTCTTTGACGATCTTAATTATTATCCTTACCTACTTTATAGAA
ATTAATTCAGTGGTTCATGG

Product: type I secretion protein

Products: NA

Alternate protein names: LC Family Type I Secretion Outer Membrane Protein; Type I Secretion Outer Membrane Protein lC; Outer Membrane Efflux Protein; Agglutination Protein; Outer Membrane Transport Protein Type I Secretion; ABC Transporter Outer Membrane Protein; OmpA/MotB Domain Protein; Type I Transport System Outer Membrane Efflux Protein; Type I Secretion Protein; Outer Membrane Efflux Protein Type I Secretion Protein; Type I Secretion Outer Membrane Protein

Number of amino acids: Translated: 435; Mature: 435

Protein sequence:

>435_residues
MKIKMFFLTTAFITQSTYASELPVIPLRDLVNAALTHQPSVAVSYYETEKKNSDLDLSRAALYPTLDLTSGLNNNRKESS
GTERNVENKVSLSYRITDFGVRGANIRKSEYERDNSKTDYEKTKNIVSQEVVTTYYNISKYREMIDGVNLEKEFYKKMLE
TFSLLVSSGVAMQSDMRKVQVSIDALNTRSIMYQSMLDDEMYKMQNMTGLNLSPDQIQSDEKFNLFKKYIFVESPEKLMD
MVMKYNDDYKMLVNTRKAATEDINAAKSSYFPTVDLVSSYVQNNPSGSAKKSDYEDEFKTGINVSFNIFNGFRNAAQERK
MVASYSQAKLQIDDFLIKTRYNIDSQLSKYTAAKETYSVAERSHTNALQLTELYEQEFQLGQKSLLDLISSRNEAFQAYV
SMIDSKYSLYILKLQQLSLIFHLMDYLKSELNVMK

Sequences:

>Translated_435_residues
MKIKMFFLTTAFITQSTYASELPVIPLRDLVNAALTHQPSVAVSYYETEKKNSDLDLSRAALYPTLDLTSGLNNNRKESS
GTERNVENKVSLSYRITDFGVRGANIRKSEYERDNSKTDYEKTKNIVSQEVVTTYYNISKYREMIDGVNLEKEFYKKMLE
TFSLLVSSGVAMQSDMRKVQVSIDALNTRSIMYQSMLDDEMYKMQNMTGLNLSPDQIQSDEKFNLFKKYIFVESPEKLMD
MVMKYNDDYKMLVNTRKAATEDINAAKSSYFPTVDLVSSYVQNNPSGSAKKSDYEDEFKTGINVSFNIFNGFRNAAQERK
MVASYSQAKLQIDDFLIKTRYNIDSQLSKYTAAKETYSVAERSHTNALQLTELYEQEFQLGQKSLLDLISSRNEAFQAYV
SMIDSKYSLYILKLQQLSLIFHLMDYLKSELNVMK
>Mature_435_residues
MKIKMFFLTTAFITQSTYASELPVIPLRDLVNAALTHQPSVAVSYYETEKKNSDLDLSRAALYPTLDLTSGLNNNRKESS
GTERNVENKVSLSYRITDFGVRGANIRKSEYERDNSKTDYEKTKNIVSQEVVTTYYNISKYREMIDGVNLEKEFYKKMLE
TFSLLVSSGVAMQSDMRKVQVSIDALNTRSIMYQSMLDDEMYKMQNMTGLNLSPDQIQSDEKFNLFKKYIFVESPEKLMD
MVMKYNDDYKMLVNTRKAATEDINAAKSSYFPTVDLVSSYVQNNPSGSAKKSDYEDEFKTGINVSFNIFNGFRNAAQERK
MVASYSQAKLQIDDFLIKTRYNIDSQLSKYTAAKETYSVAERSHTNALQLTELYEQEFQLGQKSLLDLISSRNEAFQAYV
SMIDSKYSLYILKLQQLSLIFHLMDYLKSELNVMK

Specific function: Unknown

COG id: COG1538

COG function: function code MU; Outer membrane protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 50112; Mature: 50112

Theoretical pI: Translated: 6.35; Mature: 6.35

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.4 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.4 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKIKMFFLTTAFITQSTYASELPVIPLRDLVNAALTHQPSVAVSYYETEKKNSDLDLSRA
CEEEEEEHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCHHH
ALYPTLDLTSGLNNNRKESSGTERNVENKVSLSYRITDFGVRGANIRKSEYERDNSKTDY
HHCCCHHHHCCCCCCCCCCCCCCCCCCCEEEEEEEEEEECCCCCCCCHHHHHCCCCCCHH
EKTKNIVSQEVVTTYYNISKYREMIDGVNLEKEFYKKMLETFSLLVSSGVAMQSDMRKVQ
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHE
VSIDALNTRSIMYQSMLDDEMYKMQNMTGLNLSPDQIQSDEKFNLFKKYIFVESPEKLMD
EEHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHCCCCHHHHHHHHHEECCHHHHHH
MVMKYNDDYKMLVNTRKAATEDINAAKSSYFPTVDLVSSYVQNNPSGSAKKSDYEDEFKT
HHHHCCCCHHEEEHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCCCHHHHHC
GINVSFNIFNGFRNAAQERKMVASYSQAKLQIDDFLIKTRYNIDSQLSKYTAAKETYSVA
CCCEEEEEHHHHHHHHHHHHHHHHHHHHHEEHHHHHHHHHCCHHHHHHHHHHHHHHHHHH
ERSHTNALQLTELYEQEFQLGQKSLLDLISSRNEAFQAYVSMIDSKYSLYILKLQQLSLI
HHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCEEEEEHHHHHHHH
FHLMDYLKSELNVMK
HHHHHHHHHHHHCCC
>Mature Secondary Structure
MKIKMFFLTTAFITQSTYASELPVIPLRDLVNAALTHQPSVAVSYYETEKKNSDLDLSRA
CEEEEEEHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCHHH
ALYPTLDLTSGLNNNRKESSGTERNVENKVSLSYRITDFGVRGANIRKSEYERDNSKTDY
HHCCCHHHHCCCCCCCCCCCCCCCCCCCEEEEEEEEEEECCCCCCCCHHHHHCCCCCCHH
EKTKNIVSQEVVTTYYNISKYREMIDGVNLEKEFYKKMLETFSLLVSSGVAMQSDMRKVQ
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHE
VSIDALNTRSIMYQSMLDDEMYKMQNMTGLNLSPDQIQSDEKFNLFKKYIFVESPEKLMD
EEHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHCCCCHHHHHHHHHEECCHHHHHH
MVMKYNDDYKMLVNTRKAATEDINAAKSSYFPTVDLVSSYVQNNPSGSAKKSDYEDEFKT
HHHHCCCCHHEEEHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCCCHHHHHC
GINVSFNIFNGFRNAAQERKMVASYSQAKLQIDDFLIKTRYNIDSQLSKYTAAKETYSVA
CCCEEEEEHHHHHHHHHHHHHHHHHHHHHEEHHHHHHHHHCCHHHHHHHHHHHHHHHHHH
ERSHTNALQLTELYEQEFQLGQKSLLDLISSRNEAFQAYVSMIDSKYSLYILKLQQLSLI
HHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCEEEEEHHHHHHHH
FHLMDYLKSELNVMK
HHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA