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The map label for this gene is ubiC [H]

Identifier: 29144401

GI number: 29144401

Start: 4284471

End: 4284968

Strand: Direct

Name: ubiC [H]

Synonym: t4139

Alternate gene names: 29144401

Gene position: 4284471-4284968 (Clockwise)

Preceding gene: 29144400

Following gene: 29144402

Centisome position: 89.41

GC content: 54.42

Gene sequence:

>498_bases
ATGTCACACCCTGCGTTAACGCAACTGCGTGCGCTGCGCTATTTTGATGCGATTCCTGCGCTTGAACCCCATTTGCTGGA
CTGGCTGTTGCTGGAAGATTCTGTGACTAAACGTTTTGAGCAGCAGGGAAAGCGGGTAAGCGTGACGCTGATTCGGGAAG
CGTTTGTCGGCCAAAGTGAGGTCGAGGAAGCATCAGGTTTACTGCCATCCGAGTCCCGCTACTGGTTACGTGAGATACTG
CTTTGCGCTGACGGCGAGCCCTGGCTTGCCGGACGTACCGTGGTACCGGAATCCACGCTGTGCGGACCTGAACAGGTCTT
ACAACATCTGGGTAAAACCCCGCTTGGACGTTATCTATTTACATCATCGACACTGACCCGCGATTTTATTGAAATTGGAC
GCGATGCAACGCTGTGGGGGCGCCGCTCTCGACTGCGGTTGAGCGGAAAACCGCTGTTGCTTACCGAGCTTTTTTTACCT
GCATCGCCGCTGTACTGA

Upstream 100 bases:

>100_bases
ATTTTTTTGTTGCGCAACAGATCACTTAATTGTGATTGCGCCCCCCGTAATGTCTTTTCTGAGATACAATGACTTTAGGT
TATGAATCGGAGAGTAAGGC

Downstream 100 bases:

>100_bases
GAGGAAGATAAAGATGGAGTGGAGTCTGACGCAGAGTAAGCTGCTGGCGTTTCACCGTTTGATGCGTACAGATAAGCCTA
TTGGCGCGTTGCTGCTGCTC

Product: chorismate pyruvate lyase

Products: NA

Alternate protein names: CL; CPL [H]

Number of amino acids: Translated: 165; Mature: 164

Protein sequence:

>165_residues
MSHPALTQLRALRYFDAIPALEPHLLDWLLLEDSVTKRFEQQGKRVSVTLIREAFVGQSEVEEASGLLPSESRYWLREIL
LCADGEPWLAGRTVVPESTLCGPEQVLQHLGKTPLGRYLFTSSTLTRDFIEIGRDATLWGRRSRLRLSGKPLLLTELFLP
ASPLY

Sequences:

>Translated_165_residues
MSHPALTQLRALRYFDAIPALEPHLLDWLLLEDSVTKRFEQQGKRVSVTLIREAFVGQSEVEEASGLLPSESRYWLREIL
LCADGEPWLAGRTVVPESTLCGPEQVLQHLGKTPLGRYLFTSSTLTRDFIEIGRDATLWGRRSRLRLSGKPLLLTELFLP
ASPLY
>Mature_164_residues
SHPALTQLRALRYFDAIPALEPHLLDWLLLEDSVTKRFEQQGKRVSVTLIREAFVGQSEVEEASGLLPSESRYWLREILL
CADGEPWLAGRTVVPESTLCGPEQVLQHLGKTPLGRYLFTSSTLTRDFIEIGRDATLWGRRSRLRLSGKPLLLTELFLPA
SPLY

Specific function: Removes the pyruvyl group from chorismate, with concomitant aromatization of the ring, to provide 4- hydroxybenzoate (4HB) for the ubiquinone pathway [H]

COG id: COG3161

COG function: function code H; 4-hydroxybenzoate synthetase (chorismate lyase)

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ubiC family [H]

Homologues:

Organism=Escherichia coli, GI87082361, Length=165, Percent_Identity=86.0606060606061, Blast_Score=278, Evalue=1e-76,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007440 [H]

Pfam domain/function: PF04345 Chor_lyase [H]

EC number: =4.1.3.40 [H]

Molecular weight: Translated: 18688; Mature: 18557

Theoretical pI: Translated: 6.79; Mature: 6.79

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
0.6 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSHPALTQLRALRYFDAIPALEPHLLDWLLLEDSVTKRFEQQGKRVSVTLIREAFVGQSE
CCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCEEEHHHHHHHHCCHHH
VEEASGLLPSESRYWLREILLCADGEPWLAGRTVVPESTLCGPEQVLQHLGKTPLGRYLF
HHHHHCCCCCCHHHHHHHHHHHCCCCCCCCCCEECCCCCCCCHHHHHHHCCCCCCCHHHH
TSSTLTRDFIEIGRDATLWGRRSRLRLSGKPLLLTELFLPASPLY
CCHHHHHHHHHHCCCCCCCCCCCCEEECCCCEEEHHHHCCCCCCC
>Mature Secondary Structure 
SHPALTQLRALRYFDAIPALEPHLLDWLLLEDSVTKRFEQQGKRVSVTLIREAFVGQSE
CCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCEEEHHHHHHHHCCHHH
VEEASGLLPSESRYWLREILLCADGEPWLAGRTVVPESTLCGPEQVLQHLGKTPLGRYLF
HHHHHCCCCCCHHHHHHHHHHHCCCCCCCCCCEECCCCCCCCHHHHHHHCCCCCCCHHHH
TSSTLTRDFIEIGRDATLWGRRSRLRLSGKPLLLTELFLPASPLY
CCHHHHHHHHHHCCCCCCCCCCCCEEECCCCEEEHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA