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The map label for this gene is yrdA [H]

Identifier: 29144370

GI number: 29144370

Start: 4241114

End: 4241668

Strand: Reverse

Name: yrdA [H]

Synonym: t4105

Alternate gene names: 29144370

Gene position: 4241668-4241114 (Counterclockwise)

Preceding gene: 29144371

Following gene: 29144363

Centisome position: 88.52

GC content: 51.17

Gene sequence:

>555_bases
ATGTCTGACACATTACGTCCTTATAAGGATCTTTTTCCTGAAATCGGTCAGCGCGTGATGATCGATACCAGCAGCGTGGT
TATTGGCGATGTCCGTCTGGCGGATGATGTCGGGATCTGGCCGCTTGTGGTGATTCGCGGCGATGTGAATTACGTTGCGA
TAGGGGCTCGTACGAACATTCAGGATGGCAGCGTTCTTCACGTAACCCACAAGTCTCCATCCAATCCACACGGCAACCCA
TTAATCATTGGCGAAGATGTTACCGTTGGCCATAAAGTTATGCTGCACGGCTGTACCATCGGTAACCGCGTACTGGTCGG
TATGGGCTCCATTGTGCTGGATGGCGCGATAATAGAAGATGACGTAATGATTGGCGCGGGAAGCCTGGTGCCGCAGCACA
AACGGCTGGAAAGCGGCTATTTATATCTTGGCAGTCCGGTAAAACAGATCCGCCCCCTGAGCGATGCTGAGAGATCGGGC
CTGCAGTACTCCGCCAATAACTATGTAAAATGGAAAGACGACTATCTTTCTCAGGATAACCATATCCAACCGTGA

Upstream 100 bases:

>100_bases
TTCCTGCGCAAAGTGGCGATTTTTTGATGCTATCTCCCCTTGCACAACGCCGTTAAAGCAACCAAAGTCTTCATGACTAT
TCATTTATGATGAGGTAGAC

Downstream 100 bases:

>100_bases
TCGTCTTCCTGCTGGGCCAGGATTAATGCTTCAGCCTCTTCTTCCAGGTCCCAGCGATACTCACGAAAAATGGCCAGCCA
TTGCTCCGCTGTTTCTCCAC

Product: transferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 184; Mature: 183

Protein sequence:

>184_residues
MSDTLRPYKDLFPEIGQRVMIDTSSVVIGDVRLADDVGIWPLVVIRGDVNYVAIGARTNIQDGSVLHVTHKSPSNPHGNP
LIIGEDVTVGHKVMLHGCTIGNRVLVGMGSIVLDGAIIEDDVMIGAGSLVPQHKRLESGYLYLGSPVKQIRPLSDAERSG
LQYSANNYVKWKDDYLSQDNHIQP

Sequences:

>Translated_184_residues
MSDTLRPYKDLFPEIGQRVMIDTSSVVIGDVRLADDVGIWPLVVIRGDVNYVAIGARTNIQDGSVLHVTHKSPSNPHGNP
LIIGEDVTVGHKVMLHGCTIGNRVLVGMGSIVLDGAIIEDDVMIGAGSLVPQHKRLESGYLYLGSPVKQIRPLSDAERSG
LQYSANNYVKWKDDYLSQDNHIQP
>Mature_183_residues
SDTLRPYKDLFPEIGQRVMIDTSSVVIGDVRLADDVGIWPLVVIRGDVNYVAIGARTNIQDGSVLHVTHKSPSNPHGNPL
IIGEDVTVGHKVMLHGCTIGNRVLVGMGSIVLDGAIIEDDVMIGAGSLVPQHKRLESGYLYLGSPVKQIRPLSDAERSGL
QYSANNYVKWKDDYLSQDNHIQP

Specific function: Unknown

COG id: COG0663

COG function: function code R; Carbonic anhydrases/acetyltransferases, isoleucine patch superfamily

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the gamma-class carbonic anhydrase family [H]

Homologues:

Organism=Escherichia coli, GI87082240, Length=184, Percent_Identity=87.5, Blast_Score=328, Evalue=9e-92,
Organism=Escherichia coli, GI87081681, Length=166, Percent_Identity=34.3373493975904, Blast_Score=99, Evalue=2e-22,
Organism=Escherichia coli, GI1787667, Length=158, Percent_Identity=33.5443037974684, Blast_Score=99, Evalue=2e-22,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011004 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20080; Mature: 19949

Theoretical pI: Translated: 6.14; Mature: 6.14

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSDTLRPYKDLFPEIGQRVMIDTSSVVIGDVRLADDVGIWPLVVIRGDVNYVAIGARTNI
CCCCCCHHHHHHHHHCCEEEEECCCEEEEEEEEECCCCCEEEEEEECCCCEEEEECCCCC
QDGSVLHVTHKSPSNPHGNPLIIGEDVTVGHKVMLHGCTIGNRVLVGMGSIVLDGAIIED
CCCCEEEEEECCCCCCCCCEEEEECCCCCCCEEEEEECCCCCEEEEECCCEEECCEEEEC
DVMIGAGSLVPQHKRLESGYLYLGSPVKQIRPLSDAERSGLQYSANNYVKWKDDYLSQDN
CEEEECCCCCCCCHHHCCCEEEECCCHHHHCCCCCHHHCCCEECCCCEEEECHHHCCCCC
HIQP
CCCC
>Mature Secondary Structure 
SDTLRPYKDLFPEIGQRVMIDTSSVVIGDVRLADDVGIWPLVVIRGDVNYVAIGARTNI
CCCCCHHHHHHHHHCCEEEEECCCEEEEEEEEECCCCCEEEEEEECCCCEEEEECCCCC
QDGSVLHVTHKSPSNPHGNPLIIGEDVTVGHKVMLHGCTIGNRVLVGMGSIVLDGAIIED
CCCCEEEEEECCCCCCCCCEEEEECCCCCCCEEEEEECCCCCEEEEECCCEEECCEEEEC
DVMIGAGSLVPQHKRLESGYLYLGSPVKQIRPLSDAERSGLQYSANNYVKWKDDYLSQDN
CEEEECCCCCCCCHHHCCCEEEECCCHHHHCCCCCHHHCCCEECCCCEEEECHHHCCCCC
HIQP
CCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503; 10493123 [H]