Definition | Salmonella enterica subsp. enterica serovar Typhi str. Ty2 chromosome, complete genome. |
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Accession | NC_004631 |
Length | 4,791,961 |
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The map label for this gene is fic [H]
Identifier: 29144302
GI number: 29144302
Start: 4193293
End: 4193895
Strand: Direct
Name: fic [H]
Synonym: t4035
Alternate gene names: 29144302
Gene position: 4193293-4193895 (Clockwise)
Preceding gene: 29144301
Following gene: 29144303
Centisome position: 87.51
GC content: 55.56
Gene sequence:
>603_bases ATGAGCGATAAATTTGGCGAAGGGCGCGATCCGTACCTCTATCCGGGGCTGAATGTGATGCGTAATCGGCTGGGGATTCA TCAGGCCCAGCGACTGGCGCAAGCGGCATACGAAATGACCGCGCTCCGCGCCGCTACGATTGAACTGGGGCCGCTGGTAC GCGGCTTGCCTCATCTGTGCGCGATTCATCGCCAGCTCTATCAGGATATTTTCGACTGGGCAGGGCAACTGCGGGAGGTC GATATTTACCAGGGCGATACCCGTTTCTGCCACTTTGCCTATATCGAAAAAGAGGGCAATGCCCTGATGCAGGATCTGGA AGAAGAGGGCTACCTGGTTGGTCTGACGCACGAGAAGTTTGTCGAGCGGCTGGCGCATTACTACTGTGAAATTAATGTGC TTCATCCGTTTCGTTTGGGGAGCGGGCTGGCGCAGCGCATCTTCTTTGAACAACTGGCGCTACATGCAGGCTACGCGCTG AGTTGGCAAGGTATTGCGGTTGAAACATGGAATCAGGCGAACCAGAGCGGCGCGATGGGCGATCTCTCCGCTTTGCGGGC GATTTTTCAGAAAGCGATAAGCGAAGCTCGCGAAACTGAGTAA
Upstream 100 bases:
>100_bases AACTTCCAGCAAAGCCGCCGTCTCGAAGGTATTGAGATCCCCTTAGTAACCCTGACCGCCGATGAAGCGCTGGCACGTCT TGACGAGCTTCGGAGGCACT
Downstream 100 bases:
>100_bases AATAGGGCGGTTCTACTGACCCGGAGCCGCCATGATCCTGCTTATCGATAACTATGATTCCTTTACCTGGAACCTCTACC AGTATTTTTGTGAACTGGGC
Product: cell filamentation protein Fic
Products: NA
Alternate protein names: Cell filamentation protein fic [H]
Number of amino acids: Translated: 200; Mature: 199
Protein sequence:
>200_residues MSDKFGEGRDPYLYPGLNVMRNRLGIHQAQRLAQAAYEMTALRAATIELGPLVRGLPHLCAIHRQLYQDIFDWAGQLREV DIYQGDTRFCHFAYIEKEGNALMQDLEEEGYLVGLTHEKFVERLAHYYCEINVLHPFRLGSGLAQRIFFEQLALHAGYAL SWQGIAVETWNQANQSGAMGDLSALRAIFQKAISEARETE
Sequences:
>Translated_200_residues MSDKFGEGRDPYLYPGLNVMRNRLGIHQAQRLAQAAYEMTALRAATIELGPLVRGLPHLCAIHRQLYQDIFDWAGQLREV DIYQGDTRFCHFAYIEKEGNALMQDLEEEGYLVGLTHEKFVERLAHYYCEINVLHPFRLGSGLAQRIFFEQLALHAGYAL SWQGIAVETWNQANQSGAMGDLSALRAIFQKAISEARETE >Mature_199_residues SDKFGEGRDPYLYPGLNVMRNRLGIHQAQRLAQAAYEMTALRAATIELGPLVRGLPHLCAIHRQLYQDIFDWAGQLREVD IYQGDTRFCHFAYIEKEGNALMQDLEEEGYLVGLTHEKFVERLAHYYCEINVLHPFRLGSGLAQRIFFEQLALHAGYALS WQGIAVETWNQANQSGAMGDLSALRAIFQKAISEARETE
Specific function: Involved in cell filamentation induced by cyclic AMP [H]
COG id: COG2184
COG function: function code D; Protein involved in cell division
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 fido domain [H]
Homologues:
Organism=Escherichia coli, GI1789761, Length=200, Percent_Identity=87, Blast_Score=364, Evalue=1e-102,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003812 [H]
Pfam domain/function: PF02661 Fic [H]
EC number: NA
Molecular weight: Translated: 22763; Mature: 22632
Theoretical pI: Translated: 5.83; Mature: 5.83
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDKFGEGRDPYLYPGLNVMRNRLGIHQAQRLAQAAYEMTALRAATIELGPLVRGLPHLC CCCCCCCCCCCEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AIHRQLYQDIFDWAGQLREVDIYQGDTRFCHFAYIEKEGNALMQDLEEEGYLVGLTHEKF HHHHHHHHHHHHHHHHHEEEEEECCCCCEEEEEEEECCCHHHHHHHHHCCEEEEECHHHH VERLAHYYCEINVLHPFRLGSGLAQRIFFEQLALHAGYALSWQGIAVETWNQANQSGAMG HHHHHHHHHHCCEECCHHHHHHHHHHHHHHHHHHHCCCEEEECCEEEECCCCCCCCCCCH DLSALRAIFQKAISEARETE HHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure SDKFGEGRDPYLYPGLNVMRNRLGIHQAQRLAQAAYEMTALRAATIELGPLVRGLPHLC CCCCCCCCCCEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AIHRQLYQDIFDWAGQLREVDIYQGDTRFCHFAYIEKEGNALMQDLEEEGYLVGLTHEKF HHHHHHHHHHHHHHHHHEEEEEECCCCCEEEEEEEECCCHHHHHHHHHCCEEEEECHHHH VERLAHYYCEINVLHPFRLGSGLAQRIFFEQLALHAGYALSWQGIAVETWNQANQSGAMG HHHHHHHHHHCCEECCHHHHHHHHHHHHHHHHHHHCCCEEEECCEEEECCCCCCCCCCCH DLSALRAIFQKAISEARETE HHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 2403545; 11677609 [H]