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The map label for this gene is yhfC [H]

Identifier: 29144299

GI number: 29144299

Start: 4190997

End: 4192178

Strand: Reverse

Name: yhfC [H]

Synonym: t4032

Alternate gene names: 29144299

Gene position: 4192178-4190997 (Counterclockwise)

Preceding gene: 29144305

Following gene: 29144298

Centisome position: 87.48

GC content: 54.65

Gene sequence:

>1182_bases
ATGACTAACAGCAACCGCATCAAGCTCACATGGATCAGCTTTCTTTCCTACGCCCTGACCGGGGCGCTGGTGATTGTCAC
CGGGATGGTGATGGGAAATATCGCAGACTATTTTCAGTTGCCCGTTTCCAGCATGAGTAACACCTTTACTTTCCTGAATG
CCGGGATTTTGATCTCGATCTTCCTCAATGCGTGGTTGATGGAAATCGTCCCGCTGAAAACACAGCTACGCTTTGGTTTT
ATCCTGATGGTACTGGCGGTGGCCGGGCTGATGTTCAGCCATAGCCTGGCGTTGTTCTCAGCGGCGATGTTTGTGCTGGG
GCTGGTCAGCGGGATCACCATGTCGATTGGCACCTTCCTGATTACGCAACTGTATGAAGGGCGTCAGCGCGGTTCCCGAC
TGCTGTTTACCGACTCCTTCTTCAGCATGGCGGGGATGATTTTTCCTATGGTCGCCGCCTTCCTGCTGGCGCGTAGTATT
GAGTGGTACTGGGTCTACGCCTGCATCGGCCTGGTCTACCTGGCGATTTTTATCCTGACCTTCGGCTGTGAATTTCCGGC
GCTGGGTAAACATGCGCAGCACTCTCAGGCGCCTGTCGTCAAAGAAAAATGGGGCATTGGCGTACTGTTTCTGGCCGTCG
CCGCGCTGTGCTATATCCTCGGTCAATTGGGCTTTATCTCCTGGGTGCCGGAATACGCCAAAGGCCTCGGCATGAGCCTG
AATGACGCCGGGGCGCTGGTGAGTGATTTCTGGATGTCCTATATGTTTGGCATGTGGGCGTTCAGCTTTATCCTGCGCTT
TTTCGATCTGCAACGCATCCTGACCGTACTGGCGGGTATGGCGGCGATACTGATGTATCTGTTTATTACCGGCACGCAGA
CGCATATGCCGTGGTTTATTCTGACGCTGGGCTTCTTCTCCAGCGCCATTTATACCTCCATCATTACGCTGGGATCGCAG
CAAACGAAAGTGGCCTCGCCTAAGCTGGTTAACTTTATTCTGACCTGCGGCACCATCGGAACGATGCTGACCTTCGTCGT
CACCGGCCCGATTGTGGCTCACAGCGGCCCACAGGCGGCGTTACTCACCGCGAATGGTCTGTATGCGGTGGTCTTTGTGA
TGTGCTTTGCGCTCGGCTTTGTCTCCCGTCATCGCCAGCATAGTTCGCCAGCGGCGCATTAA

Upstream 100 bases:

>100_bases
ATTACTATCACTAATAATTATTTAAATACATCACAAAAGCGCTTAAAATCTGCCCGCTTAACGCGCCCTCCACGCGCTTC
ACTTCTCTTCAAGGCCAGAC

Downstream 100 bases:

>100_bases
TAATGATTGCCGGATGGCGACGCGATGCGTCTTATCCGGCCTACAGCGTAAGCTGTTGGTAGGCCGGATAAGGCGACGTC
GCCCTCCGGCACTCTATCCC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 393; Mature: 392

Protein sequence:

>393_residues
MTNSNRIKLTWISFLSYALTGALVIVTGMVMGNIADYFQLPVSSMSNTFTFLNAGILISIFLNAWLMEIVPLKTQLRFGF
ILMVLAVAGLMFSHSLALFSAAMFVLGLVSGITMSIGTFLITQLYEGRQRGSRLLFTDSFFSMAGMIFPMVAAFLLARSI
EWYWVYACIGLVYLAIFILTFGCEFPALGKHAQHSQAPVVKEKWGIGVLFLAVAALCYILGQLGFISWVPEYAKGLGMSL
NDAGALVSDFWMSYMFGMWAFSFILRFFDLQRILTVLAGMAAILMYLFITGTQTHMPWFILTLGFFSSAIYTSIITLGSQ
QTKVASPKLVNFILTCGTIGTMLTFVVTGPIVAHSGPQAALLTANGLYAVVFVMCFALGFVSRHRQHSSPAAH

Sequences:

>Translated_393_residues
MTNSNRIKLTWISFLSYALTGALVIVTGMVMGNIADYFQLPVSSMSNTFTFLNAGILISIFLNAWLMEIVPLKTQLRFGF
ILMVLAVAGLMFSHSLALFSAAMFVLGLVSGITMSIGTFLITQLYEGRQRGSRLLFTDSFFSMAGMIFPMVAAFLLARSI
EWYWVYACIGLVYLAIFILTFGCEFPALGKHAQHSQAPVVKEKWGIGVLFLAVAALCYILGQLGFISWVPEYAKGLGMSL
NDAGALVSDFWMSYMFGMWAFSFILRFFDLQRILTVLAGMAAILMYLFITGTQTHMPWFILTLGFFSSAIYTSIITLGSQ
QTKVASPKLVNFILTCGTIGTMLTFVVTGPIVAHSGPQAALLTANGLYAVVFVMCFALGFVSRHRQHSSPAAH
>Mature_392_residues
TNSNRIKLTWISFLSYALTGALVIVTGMVMGNIADYFQLPVSSMSNTFTFLNAGILISIFLNAWLMEIVPLKTQLRFGFI
LMVLAVAGLMFSHSLALFSAAMFVLGLVSGITMSIGTFLITQLYEGRQRGSRLLFTDSFFSMAGMIFPMVAAFLLARSIE
WYWVYACIGLVYLAIFILTFGCEFPALGKHAQHSQAPVVKEKWGIGVLFLAVAALCYILGQLGFISWVPEYAKGLGMSLN
DAGALVSDFWMSYMFGMWAFSFILRFFDLQRILTVLAGMAAILMYLFITGTQTHMPWFILTLGFFSSAIYTSIITLGSQQ
TKVASPKLVNFILTCGTIGTMLTFVVTGPIVAHSGPQAALLTANGLYAVVFVMCFALGFVSRHRQHSSPAAH

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the major facilitator superfamily. TsgA family [H]

Homologues:

Organism=Escherichia coli, GI1789764, Length=393, Percent_Identity=91.0941475826972, Blast_Score=725, Evalue=0.0,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020846
- InterPro:   IPR011701
- InterPro:   IPR016196 [H]

Pfam domain/function: PF07690 MFS_1 [H]

EC number: NA

Molecular weight: Translated: 43168; Mature: 43037

Theoretical pI: Translated: 9.29; Mature: 9.29

Prosite motif: PS50850 MFS ; PS00217 SUGAR_TRANSPORT_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
5.3 %Met     (Translated Protein)
6.6 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
5.1 %Met     (Mature Protein)
6.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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EEECCHHHHHHHHHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure 
TNSNRIKLTWISFLSYALTGALVIVTGMVMGNIADYFQLPVSSMSNTFTFLNAGILISI
CCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH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EEECCHHHHHHHHHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA