Definition | Salmonella enterica subsp. enterica serovar Typhi str. Ty2 chromosome, complete genome. |
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Accession | NC_004631 |
Length | 4,791,961 |
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The map label for this gene is glgP [H]
Identifier: 29144254
GI number: 29144254
Start: 4129215
End: 4131662
Strand: Direct
Name: glgP [H]
Synonym: t3986
Alternate gene names: 29144254
Gene position: 4129215-4131662 (Clockwise)
Preceding gene: 29144253
Following gene: 29144256
Centisome position: 86.17
GC content: 52.17
Gene sequence:
>2448_bases ATGAATGCTCCGTTTACTTATGCATCGCCCACACTCAGCGTTGAGGCGCTTAAGCATTCTATTGCCTATAAGCTGATGTT TACGATTGGTAAAGACCCGGTCATTGCCAATAAACACGAATGGCTGAACGCCACGTTGTTCGCGGTGCGCGATCGTCTGG TGGAGCGCTGGCTGCGTTCTAATCGAGCCCAATTATCGCAGGAAACCCGGCAGGTTTATTACCTGTCGATGGAGTTTTTG ATTGGTCGTACTCTCTCTAACGCGCTGCTCTCGCTGGGCATTTATGACGACGTTAAAGGCGCGCTGGAGGCCATGGGCTT AGATCTCGAAGAGCTGATCGATGAAGAGAATGACCCAGGGCTTGGCAACGGCGGCTTAGGACGGCTGGCGGCTTGCTTCC TGGACTCGCTGGCGACGCTAGGATTACCGGGTCGCGGGTATGGCATTCGCTACGACTACGGCATGTTTAAGCAGAATATT GTCGACGGGCGGCAAAAAGAATCTCCGGATTACTGGCTGGAATATGGCAACCCGTGGGAGTTCAAGCGCCACAATACGCG CTATAAGGTGCTTTTTGGCGGGCGCATTCAGCAGGAAGGTAAAAAAGCGCGCTGGATTGAGACGGAAGAGATTCTGGCCG TCGCGTATGATCAGATCATCCCCGGTTACGACACCGACGCCACTAACACACTGCGGCTGTGGAATGCGCAGGCCAGTAGT GAAATCAACCTCGGTAAATTCAACCAGGGCGACTACTTTGCGGCGGTGGAAGATAAAAACCACTCTGAGAACGTTTCACG GGTGCTCTACCCGGACGATTCCACCTATTCCGGACGCGAGCTACGCCTGCGCCAGGAGTATTTTCTGGTCTCGGCGACGG TACAGGATATCCTGCACCGTCATTATCAACTGCATAAAACCTATGAGAATCTGGCGGATAAAATCGCCATTCACCTCAAT GATACGCATCCGGTGCTGTCAATTCCGGAGCTGATGCGCCTGCTGATTGATGAACATAAATTTAGCTGGGACGACGCGTT TGAGGTGTGCTGTCAGGTCTTCTCTTATACCAACCATACGTTGATGAGCGAGGCGCTGGAAACCTGGCCCGTCGATATGC TGGGGAAAATTCTGCCCCGTCACCTGCAGATTATCTTCGAGATTAACGACTATTTCCTGAAAACGTTGCAGGAGCAATAT CCCAACGATACCAGCCTGCTTGGACGCGCGTCGATTATTGATGAGTCGAACGGTCGCCGGGTACGGATGGCCTGGCTGGC GGTGGTAGTCAGCCATAAAGTCAACGGCGTTTCTGAACTCCATTCCAACCTGATGGTGCAGTCGCTGTTCGCGGATTTTG CGAAGATTTTCCCGACCCGTTTTTGTAACGTCACGAACGGCGTTACGCCGCGCCGCTGGCTGGCGCTGGCAAACCCGCCG CTTTCTGACGTGCTGGATGAGAATATTGGTCGTACCTGGCGTACCGATCTTAGTCAGCTCAGCGAGCTGAAGCAGCATTG TGATTATCCGCTGGTCAATCATGCGGTGCGTCAGGCGAAGCTGGAAAATAAAAAGCGGCTGGCGGTAGTGATAGCGCAAC AACTGAATGTGGTGGTGAACCCTAAAGCGTTATTCGACGTGCAGATTAAGCGTATTCACGAATACAAGCGGCAGTTGATG AACGTACTGCATGTCATTACCCGCTATAACCGCATTAAAGAAAATCCGGAGGCCGACTGGGTGCCGCGGGTGAATATTTT TGCCGGTAAGGCGGCTTCCGCCTATTACATGGCAAAACATATCATTCATCTGATCAACGACGTGGCGAAAGTGATTAACA ACGATCCGCAGATTGGCGACAAGCTGAAAGTAGTGTTTATCCCGAACTACAGTGTCAGTCTGGCGCAGGTGATCATTCCC GCTGCCGACCTGTCTGAGCAGATTTCGCTGGCAGGGACAGAAGCTTCCGGCACCAGTAATATGAAATTTGCCCTGAACGG CGCGCTCACCATTGGTACGCTGGATGGCGCGAACGTAGAGATGCAGGAGCATGTCGGCGAGGAGAATATCTTTATCTTCG GTAATACTGCAGAAGAGGTGGAAGCGTTGCGCAGACAGGGTTATAAGCCTCGCGACTATTATGAAAAAGATGAAGAGCTA CATCAGGTACTGACGCAGATTGGTAACGGCGTCTTTAATCCGGAAGAGCCAGGCCGTTACCGCGATCTGGTAGATTCGCT GATTAACTTTGGCGATCACTATCAGGTGCTGGCGGACTACCGCAGCTACGTGGACTGCCAGGATAAGGTGGATGAGTTGT ATCGTCGCCCGGAAGAGTGGACGACGAAAGCGATGCTCAACATTGCCAATATGGGCTACTTCTCATCGGACAGAACCATC AAAGAGTATGCCGAAAATATCTGGCATATTGATCCGGTGCGGTTGTAA
Upstream 100 bases:
>100_bases CAACGGCAGGCGATGGCGATGGATTTTAGCTGGCAAGTTGCCGCGAAATCATACCGCGAGCTGTACTATCGCTTGAAATA GTCATCCAGGAATCATTTAT
Downstream 100 bases:
>100_bases ATCCCGATGCCGACGGCGCTTCGCTTGCCCGGCCTACGTTTATGTATCCTTGTAGGCCGGATCAGGCGTTAGCCGCCATC CGGCATTTTTCTCAGGACGC
Product: glycogen phosphorylase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 815; Mature: 815
Protein sequence:
>815_residues MNAPFTYASPTLSVEALKHSIAYKLMFTIGKDPVIANKHEWLNATLFAVRDRLVERWLRSNRAQLSQETRQVYYLSMEFL IGRTLSNALLSLGIYDDVKGALEAMGLDLEELIDEENDPGLGNGGLGRLAACFLDSLATLGLPGRGYGIRYDYGMFKQNI VDGRQKESPDYWLEYGNPWEFKRHNTRYKVLFGGRIQQEGKKARWIETEEILAVAYDQIIPGYDTDATNTLRLWNAQASS EINLGKFNQGDYFAAVEDKNHSENVSRVLYPDDSTYSGRELRLRQEYFLVSATVQDILHRHYQLHKTYENLADKIAIHLN DTHPVLSIPELMRLLIDEHKFSWDDAFEVCCQVFSYTNHTLMSEALETWPVDMLGKILPRHLQIIFEINDYFLKTLQEQY PNDTSLLGRASIIDESNGRRVRMAWLAVVVSHKVNGVSELHSNLMVQSLFADFAKIFPTRFCNVTNGVTPRRWLALANPP LSDVLDENIGRTWRTDLSQLSELKQHCDYPLVNHAVRQAKLENKKRLAVVIAQQLNVVVNPKALFDVQIKRIHEYKRQLM NVLHVITRYNRIKENPEADWVPRVNIFAGKAASAYYMAKHIIHLINDVAKVINNDPQIGDKLKVVFIPNYSVSLAQVIIP AADLSEQISLAGTEASGTSNMKFALNGALTIGTLDGANVEMQEHVGEENIFIFGNTAEEVEALRRQGYKPRDYYEKDEEL HQVLTQIGNGVFNPEEPGRYRDLVDSLINFGDHYQVLADYRSYVDCQDKVDELYRRPEEWTTKAMLNIANMGYFSSDRTI KEYAENIWHIDPVRL
Sequences:
>Translated_815_residues MNAPFTYASPTLSVEALKHSIAYKLMFTIGKDPVIANKHEWLNATLFAVRDRLVERWLRSNRAQLSQETRQVYYLSMEFL IGRTLSNALLSLGIYDDVKGALEAMGLDLEELIDEENDPGLGNGGLGRLAACFLDSLATLGLPGRGYGIRYDYGMFKQNI VDGRQKESPDYWLEYGNPWEFKRHNTRYKVLFGGRIQQEGKKARWIETEEILAVAYDQIIPGYDTDATNTLRLWNAQASS EINLGKFNQGDYFAAVEDKNHSENVSRVLYPDDSTYSGRELRLRQEYFLVSATVQDILHRHYQLHKTYENLADKIAIHLN DTHPVLSIPELMRLLIDEHKFSWDDAFEVCCQVFSYTNHTLMSEALETWPVDMLGKILPRHLQIIFEINDYFLKTLQEQY PNDTSLLGRASIIDESNGRRVRMAWLAVVVSHKVNGVSELHSNLMVQSLFADFAKIFPTRFCNVTNGVTPRRWLALANPP LSDVLDENIGRTWRTDLSQLSELKQHCDYPLVNHAVRQAKLENKKRLAVVIAQQLNVVVNPKALFDVQIKRIHEYKRQLM NVLHVITRYNRIKENPEADWVPRVNIFAGKAASAYYMAKHIIHLINDVAKVINNDPQIGDKLKVVFIPNYSVSLAQVIIP AADLSEQISLAGTEASGTSNMKFALNGALTIGTLDGANVEMQEHVGEENIFIFGNTAEEVEALRRQGYKPRDYYEKDEEL HQVLTQIGNGVFNPEEPGRYRDLVDSLINFGDHYQVLADYRSYVDCQDKVDELYRRPEEWTTKAMLNIANMGYFSSDRTI KEYAENIWHIDPVRL >Mature_815_residues MNAPFTYASPTLSVEALKHSIAYKLMFTIGKDPVIANKHEWLNATLFAVRDRLVERWLRSNRAQLSQETRQVYYLSMEFL IGRTLSNALLSLGIYDDVKGALEAMGLDLEELIDEENDPGLGNGGLGRLAACFLDSLATLGLPGRGYGIRYDYGMFKQNI VDGRQKESPDYWLEYGNPWEFKRHNTRYKVLFGGRIQQEGKKARWIETEEILAVAYDQIIPGYDTDATNTLRLWNAQASS EINLGKFNQGDYFAAVEDKNHSENVSRVLYPDDSTYSGRELRLRQEYFLVSATVQDILHRHYQLHKTYENLADKIAIHLN DTHPVLSIPELMRLLIDEHKFSWDDAFEVCCQVFSYTNHTLMSEALETWPVDMLGKILPRHLQIIFEINDYFLKTLQEQY PNDTSLLGRASIIDESNGRRVRMAWLAVVVSHKVNGVSELHSNLMVQSLFADFAKIFPTRFCNVTNGVTPRRWLALANPP LSDVLDENIGRTWRTDLSQLSELKQHCDYPLVNHAVRQAKLENKKRLAVVIAQQLNVVVNPKALFDVQIKRIHEYKRQLM NVLHVITRYNRIKENPEADWVPRVNIFAGKAASAYYMAKHIIHLINDVAKVINNDPQIGDKLKVVFIPNYSVSLAQVIIP AADLSEQISLAGTEASGTSNMKFALNGALTIGTLDGANVEMQEHVGEENIFIFGNTAEEVEALRRQGYKPRDYYEKDEEL HQVLTQIGNGVFNPEEPGRYRDLVDSLINFGDHYQVLADYRSYVDCQDKVDELYRRPEEWTTKAMLNIANMGYFSSDRTI KEYAENIWHIDPVRL
Specific function: Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties [
COG id: COG0058
COG function: function code G; Glucan phosphorylase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycogen phosphorylase family [H]
Homologues:
Organism=Homo sapiens, GI71037379, Length=812, Percent_Identity=50.8620689655172, Blast_Score=810, Evalue=0.0, Organism=Homo sapiens, GI21361370, Length=810, Percent_Identity=50.7407407407407, Blast_Score=805, Evalue=0.0, Organism=Homo sapiens, GI5032009, Length=810, Percent_Identity=49.2592592592593, Blast_Score=797, Evalue=0.0, Organism=Homo sapiens, GI255653002, Length=812, Percent_Identity=49.5073891625616, Blast_Score=765, Evalue=0.0, Organism=Homo sapiens, GI257900462, Length=665, Percent_Identity=49.4736842105263, Blast_Score=692, Evalue=0.0, Organism=Escherichia coli, GI2367228, Length=815, Percent_Identity=93.1288343558282, Blast_Score=1564, Evalue=0.0, Organism=Escherichia coli, GI48994936, Length=766, Percent_Identity=48.0417754569191, Blast_Score=732, Evalue=0.0, Organism=Caenorhabditis elegans, GI17564550, Length=810, Percent_Identity=51.2345679012346, Blast_Score=840, Evalue=0.0, Organism=Caenorhabditis elegans, GI32566204, Length=810, Percent_Identity=51.2345679012346, Blast_Score=839, Evalue=0.0, Organism=Saccharomyces cerevisiae, GI6325418, Length=811, Percent_Identity=47.1023427866831, Blast_Score=722, Evalue=0.0, Organism=Drosophila melanogaster, GI78706832, Length=809, Percent_Identity=49.5673671199011, Blast_Score=815, Evalue=0.0, Organism=Drosophila melanogaster, GI24581010, Length=809, Percent_Identity=49.5673671199011, Blast_Score=815, Evalue=0.0,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011833 - InterPro: IPR000811 [H]
Pfam domain/function: PF00343 Phosphorylase [H]
EC number: =2.4.1.1 [H]
Molecular weight: Translated: 93371; Mature: 93371
Theoretical pI: Translated: 5.95; Mature: 5.95
Prosite motif: PS00102 PHOSPHORYLASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNAPFTYASPTLSVEALKHSIAYKLMFTIGKDPVIANKHEWLNATLFAVRDRLVERWLRS CCCCCCCCCCCHHHHHHHHHHHHHHEEEECCCCEECCCHHHHHHHHHHHHHHHHHHHHHH NRAQLSQETRQVYYLSMEFLIGRTLSNALLSLGIYDDVKGALEAMGLDLEELIDEENDPG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCHHHHHCCCCCCC LGNGGLGRLAACFLDSLATLGLPGRGYGIRYDYGMFKQNIVDGRQKESPDYWLEYGNPWE CCCCCHHHHHHHHHHHHHHCCCCCCCCCEEECHHHHHHHHHCCCCCCCCCCEEECCCCCC FKRHNTRYKVLFGGRIQQEGKKARWIETEEILAVAYDQIIPGYDTDATNTLRLWNAQASS CCCCCCEEEEEECCEEHHCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCC EINLGKFNQGDYFAAVEDKNHSENVSRVLYPDDSTYSGRELRLRQEYFLVSATVQDILHR CCCCCCCCCCCEEEEECCCCCCCCCCEEECCCCCCCCCCCEEEHHHHHHHHHHHHHHHHH HYQLHKTYENLADKIAIHLNDTHPVLSIPELMRLLIDEHKFSWDDAFEVCCQVFSYTNHT HHHHHHHHHHHHHEEEEEECCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCHH LMSEALETWPVDMLGKILPRHLQIIFEINDYFLKTLQEQYPNDTSLLGRASIIDESNGRR HHHHHHHHCCHHHHHHHHHHHHHEEEHHHHHHHHHHHHHCCCCHHHHCCHHEEECCCCCE VRMAWLAVVVSHKVNGVSELHSNLMVQSLFADFAKIFPTRFCNVTNGVTPRRWLALANPP EHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHEEEECCCC LSDVLDENIGRTWRTDLSQLSELKQHCDYPLVNHAVRQAKLENKKRLAVVIAQQLNVVVN HHHHHHHHCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCHHHHHHHHHHCCEEEC PKALFDVQIKRIHEYKRQLMNVLHVITRYNRIKENPEADWVPRVNIFAGKAASAYYMAKH CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCHHHHHHHHH IIHLINDVAKVINNDPQIGDKLKVVFIPNYSVSLAQVIIPAADLSEQISLAGTEASGTSN HHHHHHHHHHHHCCCCCCCCEEEEEEECCCCHHHHHHHHCHHCHHHHHHCCCCCCCCCCC MKFALNGALTIGTLDGANVEMQEHVGEENIFIFGNTAEEVEALRRQGYKPRDYYEKDEEL EEEEEECEEEEEECCCCCCCHHHHCCCCCEEEECCCHHHHHHHHHCCCCCCHHCCCHHHH HQVLTQIGNGVFNPEEPGRYRDLVDSLINFGDHYQVLADYRSYVDCQDKVDELYRRPEEW HHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHCCHHHHHHHHHHCCHHH TTKAMLNIANMGYFSSDRTIKEYAENIWHIDPVRL HHHHHHHHHHCCCCCCCCHHHHHHHHCCCCCCCCC >Mature Secondary Structure MNAPFTYASPTLSVEALKHSIAYKLMFTIGKDPVIANKHEWLNATLFAVRDRLVERWLRS CCCCCCCCCCCHHHHHHHHHHHHHHEEEECCCCEECCCHHHHHHHHHHHHHHHHHHHHHH NRAQLSQETRQVYYLSMEFLIGRTLSNALLSLGIYDDVKGALEAMGLDLEELIDEENDPG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCHHHHHCCCCCCC LGNGGLGRLAACFLDSLATLGLPGRGYGIRYDYGMFKQNIVDGRQKESPDYWLEYGNPWE CCCCCHHHHHHHHHHHHHHCCCCCCCCCEEECHHHHHHHHHCCCCCCCCCCEEECCCCCC FKRHNTRYKVLFGGRIQQEGKKARWIETEEILAVAYDQIIPGYDTDATNTLRLWNAQASS CCCCCCEEEEEECCEEHHCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCC EINLGKFNQGDYFAAVEDKNHSENVSRVLYPDDSTYSGRELRLRQEYFLVSATVQDILHR CCCCCCCCCCCEEEEECCCCCCCCCCEEECCCCCCCCCCCEEEHHHHHHHHHHHHHHHHH HYQLHKTYENLADKIAIHLNDTHPVLSIPELMRLLIDEHKFSWDDAFEVCCQVFSYTNHT HHHHHHHHHHHHHEEEEEECCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCHH LMSEALETWPVDMLGKILPRHLQIIFEINDYFLKTLQEQYPNDTSLLGRASIIDESNGRR HHHHHHHHCCHHHHHHHHHHHHHEEEHHHHHHHHHHHHHCCCCHHHHCCHHEEECCCCCE VRMAWLAVVVSHKVNGVSELHSNLMVQSLFADFAKIFPTRFCNVTNGVTPRRWLALANPP EHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHEEEECCCC LSDVLDENIGRTWRTDLSQLSELKQHCDYPLVNHAVRQAKLENKKRLAVVIAQQLNVVVN HHHHHHHHCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCHHHHHHHHHHCCEEEC PKALFDVQIKRIHEYKRQLMNVLHVITRYNRIKENPEADWVPRVNIFAGKAASAYYMAKH CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCHHHHHHHHH IIHLINDVAKVINNDPQIGDKLKVVFIPNYSVSLAQVIIPAADLSEQISLAGTEASGTSN HHHHHHHHHHHHCCCCCCCCEEEEEEECCCCHHHHHHHHCHHCHHHHHHCCCCCCCCCCC MKFALNGALTIGTLDGANVEMQEHVGEENIFIFGNTAEEVEALRRQGYKPRDYYEKDEEL EEEEEECEEEEEECCCCCCCHHHHCCCCCEEEECCCHHHHHHHHHCCCCCCHHCCCHHHH HQVLTQIGNGVFNPEEPGRYRDLVDSLINFGDHYQVLADYRSYVDCQDKVDELYRRPEEW HHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHCCHHHHHHHHHHCCHHH TTKAMLNIANMGYFSSDRTIKEYAENIWHIDPVRL HHHHHHHHHHCCCCCCCCHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 2645169; 3047129; 9278503; 2975249; 3097003 [H]