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The map label for this gene is yhhS [C]

Identifier: 29144210

GI number: 29144210

Start: 4081207

End: 4082424

Strand: Direct

Name: yhhS [C]

Synonym: t3941

Alternate gene names: 29144210

Gene position: 4081207-4082424 (Clockwise)

Preceding gene: 29144206

Following gene: 29144213

Centisome position: 85.17

GC content: 59.28

Gene sequence:

>1218_bases
ATGCCCGAACCCGTCGCTGAACCGGCGCTAAACGGATTGCGCCTCAATCTGCGTATTGTCTCCATCGTGATGTTTAACTT
TGCCAGCTACCTGACTATCGGCCTGCCGCTCGCCGTCTTGCCCGGCTATGTGCATGATGCGATGGGATTCAGCGCGTTCT
GGGCGGGGCTTATTATCAGCCTGCAATACTTCGCCACTCTGTTAAGCCGTCCCCATGCCGGGCGGTATGCGGATGTATTA
GGGCCGAAAAAAATCGTTGTCTTTGGCTTATGCGGCTGTTTTTTAAGCGGACTCGGCTACCTGCTGGCGGATATCGCCAG
CGCCTGGCCGATGATCAATTTGTTGCTACTGGGGCTGGGTCGCGTGATTTTGGGGATTGGGCAAAGTTTTGCCGGCACCG
GTTCGACACTGTGGGGCGTCGGCGTCGTCGGGTCGTTGCATATTGGTCGGGTTATCTCCTGGAACGGTATCGTCACCTAC
GGCGCAATGGCGATGGGCGCGCCGCTGGGCGTGCTGTGTTATGCCTGGGGCGGGTTACAGGGACTGGCGCTAACGGTGAT
GGGCGTGGCGCTGTTGGCGGTACTGTTAGCCCTTCCACGTCCGTCGGTGAAGGCGAACAAAGGCAAGCCGCTGCCGTTTC
GCGCGGTGCTGGGGCGTGTCTGGCTGTATGGTATGGCGTTGGCGCTGGCCTCGGCAGGGTTTGGCGTCATCGCGACGTTT
ATTACCTTATTTTATGATGCTAAAGGTTGGGATGGCGCCGCCTTTGCGCTCACGTTATTTAGCGTCGCGTTTGTCGGCAC
GCGTTTGCTGTTCCCTAACGGTATCAATCGCTTAGGCGGGTTGAATGTCGCCATGATCTGCTTTGGCGTGGAGATTATTG
GTCTGTTACTGGTGGGGACGGCAGCCATGCCGTGGATGGCAAAAATCGGCGTTTTACTCACGGGGATGGGGTTTTCGCTG
GTCTTTCCGGCGCTGGGTGTGGTGGCCGTCAAAGCCGTGCCGCCGCAGAACCAGGGCGCGGCGCTGGCGACCTATACCGT
CTTTATGGATATGTCTTTGGGGGTGACCGGGCCGCTGGCGGGGCTGGTGATGACCTGGGCGGGCGTGCCGGTGATTTATC
TGGCGGCGGCCGGGCTGGTAGCGATGGCGCTATTACTGACCTGGCGCTTAAAAAAACGGCCTCCGTCTGCACTGCCGGAG
GCCGCATCATCGTCGTGA

Upstream 100 bases:

>100_bases
GTAGCGGCTGCCCTGATACCGATAATCTGAATCTCACTACTGATTTTCACCGCGCGCCATGATAGAAAAGAAAACATGTT
GTAAAAATGCGGTGATACTC

Downstream 100 bases:

>100_bases
AGGTTACTTAATAACCAACGTATTGATGATGTTTTCAGCTGTGGTTTGCGCTTTTTGCTGATTGTCCGCAGGCAGCGTGA
CCTGAATCGTCAGCAATTGG

Product: major facilitator superfamily transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 405; Mature: 404

Protein sequence:

>405_residues
MPEPVAEPALNGLRLNLRIVSIVMFNFASYLTIGLPLAVLPGYVHDAMGFSAFWAGLIISLQYFATLLSRPHAGRYADVL
GPKKIVVFGLCGCFLSGLGYLLADIASAWPMINLLLLGLGRVILGIGQSFAGTGSTLWGVGVVGSLHIGRVISWNGIVTY
GAMAMGAPLGVLCYAWGGLQGLALTVMGVALLAVLLALPRPSVKANKGKPLPFRAVLGRVWLYGMALALASAGFGVIATF
ITLFYDAKGWDGAAFALTLFSVAFVGTRLLFPNGINRLGGLNVAMICFGVEIIGLLLVGTAAMPWMAKIGVLLTGMGFSL
VFPALGVVAVKAVPPQNQGAALATYTVFMDMSLGVTGPLAGLVMTWAGVPVIYLAAAGLVAMALLLTWRLKKRPPSALPE
AASSS

Sequences:

>Translated_405_residues
MPEPVAEPALNGLRLNLRIVSIVMFNFASYLTIGLPLAVLPGYVHDAMGFSAFWAGLIISLQYFATLLSRPHAGRYADVL
GPKKIVVFGLCGCFLSGLGYLLADIASAWPMINLLLLGLGRVILGIGQSFAGTGSTLWGVGVVGSLHIGRVISWNGIVTY
GAMAMGAPLGVLCYAWGGLQGLALTVMGVALLAVLLALPRPSVKANKGKPLPFRAVLGRVWLYGMALALASAGFGVIATF
ITLFYDAKGWDGAAFALTLFSVAFVGTRLLFPNGINRLGGLNVAMICFGVEIIGLLLVGTAAMPWMAKIGVLLTGMGFSL
VFPALGVVAVKAVPPQNQGAALATYTVFMDMSLGVTGPLAGLVMTWAGVPVIYLAAAGLVAMALLLTWRLKKRPPSALPE
AASSS
>Mature_404_residues
PEPVAEPALNGLRLNLRIVSIVMFNFASYLTIGLPLAVLPGYVHDAMGFSAFWAGLIISLQYFATLLSRPHAGRYADVLG
PKKIVVFGLCGCFLSGLGYLLADIASAWPMINLLLLGLGRVILGIGQSFAGTGSTLWGVGVVGSLHIGRVISWNGIVTYG
AMAMGAPLGVLCYAWGGLQGLALTVMGVALLAVLLALPRPSVKANKGKPLPFRAVLGRVWLYGMALALASAGFGVIATFI
TLFYDAKGWDGAAFALTLFSVAFVGTRLLFPNGINRLGGLNVAMICFGVEIIGLLLVGTAAMPWMAKIGVLLTGMGFSLV
FPALGVVAVKAVPPQNQGAALATYTVFMDMSLGVTGPLAGLVMTWAGVPVIYLAAAGLVAMALLLTWRLKKRPPSALPEA
ASSS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0226 family [H]

Homologues:

Organism=Escherichia coli, GI87082270, Length=405, Percent_Identity=90.6172839506173, Blast_Score=714, Evalue=0.0,
Organism=Escherichia coli, GI1788662, Length=372, Percent_Identity=42.2043010752688, Blast_Score=232, Evalue=4e-62,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020846
- InterPro:   IPR011701
- InterPro:   IPR016196
- InterPro:   IPR023008 [H]

Pfam domain/function: PF07690 MFS_1 [H]

EC number: NA

Molecular weight: Translated: 42110; Mature: 41979

Theoretical pI: Translated: 10.19; Mature: 10.19

Prosite motif: PS50850 MFS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC
>Mature Secondary Structure 
PEPVAEPALNGLRLNLRIVSIVMFNFASYLTIGLPLAVLPGYVHDAMGFSAFWAGLIIS
CCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHH
LQYFATLLSRPHAGRYADVLGPKKIVVFGLCGCFLSGLGYLLADIASAWPMINLLLLGLG
HHHHHHHHCCCCCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RVILGIGQSFAGTGSTLWGVGVVGSLHIGRVISWNGIVTYGAMAMGAPLGVLCYAWGGLQ
HHHHHCCCCCCCCCCCHHHHHHHHHHHHCCEEECCCHHHHHHHHHCCCHHHHHHHHCCHH
GLALTVMGVALLAVLLALPRPSVKANKGKPLPFRAVLGRVWLYGMALALASAGFGVIATF
HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHH
ITLFYDAKGWDGAAFALTLFSVAFVGTRLLFPNGINRLGGLNVAMICFGVEIIGLLLVGT
HHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHCCCHHHHHHHHHHHHHHHHHHH
AAMPWMAKIGVLLTGMGFSLVFPALGVVAVKAVPPQNQGAALATYTVFMDMSLGVTGPLA
HHHHHHHHHHHHHHCCCHHHHHHHHHHHEEEECCCCCCCCCHHHHHEEEECCCCCCHHHH
GLVMTWAGVPVIYLAAAGLVAMALLLTWRLKKRPPSALPEAASSS
HHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA