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The map label for this gene is yhjK [H]

Identifier: 29144174

GI number: 29144174

Start: 4034376

End: 4036307

Strand: Direct

Name: yhjK [H]

Synonym: t3902

Alternate gene names: 29144174

Gene position: 4034376-4036307 (Clockwise)

Preceding gene: 29144173

Following gene: 29144175

Centisome position: 84.19

GC content: 55.43

Gene sequence:

>1932_bases
ATGGCAATGGTTGCGGCCGTTGTCATGGTGTTTGTTTTTGTCTTTTGCACCGTTTTGTTGTTCCATCTGGTACAGCAGAA
CCGCTACAACACGGCTACGCAACTGGAAAGCATCGCGCGCTCTGTTCGGGAACCTCTTTCTTCCGCGATTTTAAAAGCGG
ATCTCCCCGGCGCGGAAACCATTCTGGAAAGTATTAAACCTGCGGGCGTGGTGAGTCGCGCCGATGTGGTATTGCCGAAT
CAGTTCCAGGCGTTGCGTAAGCGCTTCATTCCTGAACGCCCCGTCCCGGTTATGGTGACGCGTCTCTTCGAACTGCCGGT
ACAAATTTCTTTGCCGGTTTATTCGCTGGAGCGTCCCGCCAATCCGCAACCGCTGGCCTACCTTGTATTGCAGGCGGATT
CGTACCGTATGTACAAGTTCGTCATGAGCGCGCTCTCTACGTTAGTGACCATTTACTTACTTTTATCGCTGATCCTGACG
GTGGCCATCGCCTGGTGCGTAAACCGCCTGATTGTGCATCCGCTGCGCAAAATCGCCCGCGAGCTGAACGACATTCCGCA
GCAGGAGCTGATCGGACATCAGCTGGCGTTGCCGCGTCTGCATCAGGATGATGAAATTGGGATGCTGGTGCGCAGCTATA
ACCTCAACCAGCAGCTTATGCAGCGTCAACGCGAGGAGCAAACGGACAACGCGATGCGTTTTCCGGTTTCCGAGTTGCCC
AATAAAGCCTTTTTAATGGCGCTGCTGGAACAGGTTATCACCCGCCAACAGACCACCGCGCTTATCATCGTGACGTGCGA
AACGTTGCGTGACACGGCAGGCGTGCTGCAAGAAACGCAGCGGGAGATTCTATTACTGACGCTGGTTGAGAAGCTGAAGT
CGGTGCTGGCGCCGCGCATGGTGCTTACGCAGGTCAGCGGGTATGACTTTGCCATTATCGCCCACGGCGTCAAAGAGCCG
TGGCACGCCATCACATTAGGTCAGCAAATACTCACTATCATTAATGAACGACTGCCCATCCAGGGTATTCAACTGCGCCC
AAGCTGCAGTATTGGCATTGCGATGTATTATGGCGATCTGACCGCCGAAGCGCTCTATGGTCGCGCCGTCTCCGCCGCGT
TTACCGCGCGCCGAAAAGGTAAAAATCAGATCCAGTTCTTTGACCCGGCGCAGATGGAGGCCGCTCAACAGCGCCTTACC
GAAGAGAGCGATATCCTTACCGCGCTGGATAACCATCAGTTTGCCATTTGGCTGCAGCCGCAGGTCGAGATGCGCAGCGG
CAACGTATTAAGCGCCGAAGCCTTGTTACGTATGCAGCAGCCGGACGGTAGCTGGGAATTGCCGGAGGGGCTGATTGAGC
GCATTGAATCCTGCGGCCTGATGGTCACGGTGGGCCATTGGGTGCTGGAAGAGTCCTGCCGCCAGCTTGCCGCCTGGCAG
GAGCGCGGCGTGACATTGCCGCTCTCCGTCAATCTTTCCGCGTTACAGCTCATGCACCCTGGCATGGTGTCGGATCTGCT
GGAATTGTTAAACCGCTATCGTATTCAACCGGGTACGCTGATTCTTGAGGTCACTGAAAGCCGCCGTATCGACGATCCGC
ACGCTGCCGTCGCTATCTTACGTCCGTTACGTAATGCTGGCGTGCGTATCGCACTGGATGATTTTGGCATGGGTTACGCG
GGGCTGCGCCAGTTACAGCATATGAAGTCGCTACCGGTCGATATCCTTAAAATTGATAAAATGTTTGTCGATGGGTTACC
GGATGATCACAGTATGGTGACGGCGATTATCCTGATGGCCCGCAGTCTTAATTTACAATTGATTGCCGAGGGCGTGGAGG
ACGAGGCGCAACGCGCGTGGCTTGGAACAGGCGGGAGTCAACGTCGCGCAAGGCTTCCTGTTTGCTCGGCCCGTTCCCGC
GGATATCTTTGA

Upstream 100 bases:

>100_bases
CCTCTCTTAATGCCGCTGCAATCGGGTATACTCAGGCGGCAGTCCGGGATATCCAGGGAGAGTCAATTTGCGCGTCAGCC
GCTCGTTAACAATTAAACAG

Downstream 100 bases:

>100_bases
AGAACGGTATCTGTCGCACGAAAATCCTGATTACAAAAGTTAAAAAAGGTCGCGCTTGTGCGAGTCAGCTCAAACTTTTT
AACATTTTTGTTTCAATTAT

Product: phosphodiesterase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 643; Mature: 642

Protein sequence:

>643_residues
MAMVAAVVMVFVFVFCTVLLFHLVQQNRYNTATQLESIARSVREPLSSAILKADLPGAETILESIKPAGVVSRADVVLPN
QFQALRKRFIPERPVPVMVTRLFELPVQISLPVYSLERPANPQPLAYLVLQADSYRMYKFVMSALSTLVTIYLLLSLILT
VAIAWCVNRLIVHPLRKIARELNDIPQQELIGHQLALPRLHQDDEIGMLVRSYNLNQQLMQRQREEQTDNAMRFPVSELP
NKAFLMALLEQVITRQQTTALIIVTCETLRDTAGVLQETQREILLLTLVEKLKSVLAPRMVLTQVSGYDFAIIAHGVKEP
WHAITLGQQILTIINERLPIQGIQLRPSCSIGIAMYYGDLTAEALYGRAVSAAFTARRKGKNQIQFFDPAQMEAAQQRLT
EESDILTALDNHQFAIWLQPQVEMRSGNVLSAEALLRMQQPDGSWELPEGLIERIESCGLMVTVGHWVLEESCRQLAAWQ
ERGVTLPLSVNLSALQLMHPGMVSDLLELLNRYRIQPGTLILEVTESRRIDDPHAAVAILRPLRNAGVRIALDDFGMGYA
GLRQLQHMKSLPVDILKIDKMFVDGLPDDHSMVTAIILMARSLNLQLIAEGVEDEAQRAWLGTGGSQRRARLPVCSARSR
GYL

Sequences:

>Translated_643_residues
MAMVAAVVMVFVFVFCTVLLFHLVQQNRYNTATQLESIARSVREPLSSAILKADLPGAETILESIKPAGVVSRADVVLPN
QFQALRKRFIPERPVPVMVTRLFELPVQISLPVYSLERPANPQPLAYLVLQADSYRMYKFVMSALSTLVTIYLLLSLILT
VAIAWCVNRLIVHPLRKIARELNDIPQQELIGHQLALPRLHQDDEIGMLVRSYNLNQQLMQRQREEQTDNAMRFPVSELP
NKAFLMALLEQVITRQQTTALIIVTCETLRDTAGVLQETQREILLLTLVEKLKSVLAPRMVLTQVSGYDFAIIAHGVKEP
WHAITLGQQILTIINERLPIQGIQLRPSCSIGIAMYYGDLTAEALYGRAVSAAFTARRKGKNQIQFFDPAQMEAAQQRLT
EESDILTALDNHQFAIWLQPQVEMRSGNVLSAEALLRMQQPDGSWELPEGLIERIESCGLMVTVGHWVLEESCRQLAAWQ
ERGVTLPLSVNLSALQLMHPGMVSDLLELLNRYRIQPGTLILEVTESRRIDDPHAAVAILRPLRNAGVRIALDDFGMGYA
GLRQLQHMKSLPVDILKIDKMFVDGLPDDHSMVTAIILMARSLNLQLIAEGVEDEAQRAWLGTGGSQRRARLPVCSARSR
GYL
>Mature_642_residues
AMVAAVVMVFVFVFCTVLLFHLVQQNRYNTATQLESIARSVREPLSSAILKADLPGAETILESIKPAGVVSRADVVLPNQ
FQALRKRFIPERPVPVMVTRLFELPVQISLPVYSLERPANPQPLAYLVLQADSYRMYKFVMSALSTLVTIYLLLSLILTV
AIAWCVNRLIVHPLRKIARELNDIPQQELIGHQLALPRLHQDDEIGMLVRSYNLNQQLMQRQREEQTDNAMRFPVSELPN
KAFLMALLEQVITRQQTTALIIVTCETLRDTAGVLQETQREILLLTLVEKLKSVLAPRMVLTQVSGYDFAIIAHGVKEPW
HAITLGQQILTIINERLPIQGIQLRPSCSIGIAMYYGDLTAEALYGRAVSAAFTARRKGKNQIQFFDPAQMEAAQQRLTE
ESDILTALDNHQFAIWLQPQVEMRSGNVLSAEALLRMQQPDGSWELPEGLIERIESCGLMVTVGHWVLEESCRQLAAWQE
RGVTLPLSVNLSALQLMHPGMVSDLLELLNRYRIQPGTLILEVTESRRIDDPHAAVAILRPLRNAGVRIALDDFGMGYAG
LRQLQHMKSLPVDILKIDKMFVDGLPDDHSMVTAIILMARSLNLQLIAEGVEDEAQRAWLGTGGSQRRARLPVCSARSRG
YL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HAMP domain [H]

Homologues:

Organism=Escherichia coli, GI226510982, Length=612, Percent_Identity=84.9673202614379, Blast_Score=1093, Evalue=0.0,
Organism=Escherichia coli, GI1787541, Length=410, Percent_Identity=31.7073170731707, Blast_Score=175, Evalue=1e-44,
Organism=Escherichia coli, GI87081921, Length=405, Percent_Identity=28.8888888888889, Blast_Score=169, Evalue=7e-43,
Organism=Escherichia coli, GI87081743, Length=218, Percent_Identity=35.7798165137615, Blast_Score=129, Evalue=9e-31,
Organism=Escherichia coli, GI1790496, Length=233, Percent_Identity=34.3347639484979, Blast_Score=123, Evalue=3e-29,
Organism=Escherichia coli, GI87081845, Length=230, Percent_Identity=30.8695652173913, Blast_Score=110, Evalue=2e-25,
Organism=Escherichia coli, GI1786507, Length=217, Percent_Identity=33.6405529953917, Blast_Score=103, Evalue=2e-23,
Organism=Escherichia coli, GI1788849, Length=214, Percent_Identity=31.3084112149533, Blast_Score=96, Evalue=6e-21,
Organism=Escherichia coli, GI87081980, Length=236, Percent_Identity=30.5084745762712, Blast_Score=95, Evalue=1e-20,
Organism=Escherichia coli, GI87082096, Length=228, Percent_Identity=31.140350877193, Blast_Score=91, Evalue=2e-19,
Organism=Escherichia coli, GI1788502, Length=232, Percent_Identity=28.448275862069, Blast_Score=89, Evalue=7e-19,
Organism=Escherichia coli, GI1787055, Length=236, Percent_Identity=25.8474576271186, Blast_Score=77, Evalue=4e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001054
- InterPro:   IPR000160
- InterPro:   IPR001633
- InterPro:   IPR003660 [H]

Pfam domain/function: PF00563 EAL; PF00990 GGDEF; PF00672 HAMP [H]

EC number: NA

Molecular weight: Translated: 72156; Mature: 72024

Theoretical pI: Translated: 7.13; Mature: 7.13

Prosite motif: PS50885 HAMP ; PS50883 EAL ; PS50887 GGDEF

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAMVAAVVMVFVFVFCTVLLFHLVQQNRYNTATQLESIARSVREPLSSAILKADLPGAET
CHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHH
ILESIKPAGVVSRADVVLPNQFQALRKRFIPERPVPVMVTRLFELPVQISLPVYSLERPA
HHHHCCCCCCCCCCCEECCHHHHHHHHHCCCCCCHHHHHHHHHHCCEEEECCCEECCCCC
NPQPLAYLVLQADSYRMYKFVMSALSTLVTIYLLLSLILTVAIAWCVNRLIVHPLRKIAR
CCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ELNDIPQQELIGHQLALPRLHQDDEIGMLVRSYNLNQQLMQRQREEQTDNAMRFPVSELP
HHHCCCHHHHHHHHHCCCCCCCCCCHHHHHHHCCCCHHHHHHHHHHHCCCCEECCHHHCC
NKAFLMALLEQVITRQQTTALIIVTCETLRDTAGVLQETQREILLLTLVEKLKSVLAPRM
CHHHHHHHHHHHHCCCCCCEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHH
VLTQVSGYDFAIIAHGVKEPWHAITLGQQILTIINERLPIQGIQLRPSCSIGIAMYYGDL
HHHHCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCCCEEECCCCCEEEEEEECCH
TAEALYGRAVSAAFTARRKGKNQIQFFDPAQMEAAQQRLTEESDILTALDNHQFAIWLQP
HHHHHHHHHHHHHHHHHHCCCCCEEEECHHHHHHHHHHCCCHHHHHHHCCCCEEEEEECC
QVEMRSGNVLSAEALLRMQQPDGSWELPEGLIERIESCGLMVTVGHWVLEESCRQLAAWQ
CEEECCCCEEEHHHHHHCCCCCCCCCCCHHHHHHHHHCCEEEEHHHHHHHHHHHHHHHHH
ERGVTLPLSVNLSALQLMHPGMVSDLLELLNRYRIQPGTLILEVTESRRIDDPHAAVAIL
HCCCEEEEECCHHHHHHHCCCHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCHHHHHHHH
RPLRNAGVRIALDDFGMGYAGLRQLQHMKSLPVDILKIDKMFVDGLPDDHSMVTAIILMA
HHHHHCCEEEEEECCCCCHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCHHHHHHHHHHH
RSLNLQLIAEGVEDEAQRAWLGTGGSQRRARLPVCSARSRGYL
HCCCHHEECCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
AMVAAVVMVFVFVFCTVLLFHLVQQNRYNTATQLESIARSVREPLSSAILKADLPGAET
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHH
ILESIKPAGVVSRADVVLPNQFQALRKRFIPERPVPVMVTRLFELPVQISLPVYSLERPA
HHHHCCCCCCCCCCCEECCHHHHHHHHHCCCCCCHHHHHHHHHHCCEEEECCCEECCCCC
NPQPLAYLVLQADSYRMYKFVMSALSTLVTIYLLLSLILTVAIAWCVNRLIVHPLRKIAR
CCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ELNDIPQQELIGHQLALPRLHQDDEIGMLVRSYNLNQQLMQRQREEQTDNAMRFPVSELP
HHHCCCHHHHHHHHHCCCCCCCCCCHHHHHHHCCCCHHHHHHHHHHHCCCCEECCHHHCC
NKAFLMALLEQVITRQQTTALIIVTCETLRDTAGVLQETQREILLLTLVEKLKSVLAPRM
CHHHHHHHHHHHHCCCCCCEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHH
VLTQVSGYDFAIIAHGVKEPWHAITLGQQILTIINERLPIQGIQLRPSCSIGIAMYYGDL
HHHHCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCCCEEECCCCCEEEEEEECCH
TAEALYGRAVSAAFTARRKGKNQIQFFDPAQMEAAQQRLTEESDILTALDNHQFAIWLQP
HHHHHHHHHHHHHHHHHHCCCCCEEEECHHHHHHHHHHCCCHHHHHHHCCCCEEEEEECC
QVEMRSGNVLSAEALLRMQQPDGSWELPEGLIERIESCGLMVTVGHWVLEESCRQLAAWQ
CEEECCCCEEEHHHHHHCCCCCCCCCCCHHHHHHHHHCCEEEEHHHHHHHHHHHHHHHHH
ERGVTLPLSVNLSALQLMHPGMVSDLLELLNRYRIQPGTLILEVTESRRIDDPHAAVAIL
HCCCEEEEECCHHHHHHHCCCHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCHHHHHHHH
RPLRNAGVRIALDDFGMGYAGLRQLQHMKSLPVDILKIDKMFVDGLPDDHSMVTAIILMA
HHHHHCCEEEEEECCCCCHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCHHHHHHHHHHH
RSLNLQLIAEGVEDEAQRAWLGTGGSQRRARLPVCSARSRGYL
HCCCHHEECCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8041620; 9278503; 10493123 [H]