Click here to switch to the map view.

The map label for this gene is yibN [H]

Identifier: 29144096

GI number: 29144096

Start: 3937320

End: 3937751

Strand: Direct

Name: yibN [H]

Synonym: t3816

Alternate gene names: 29144096

Gene position: 3937320-3937751 (Clockwise)

Preceding gene: 29144092

Following gene: 29144097

Centisome position: 82.17

GC content: 49.77

Gene sequence:

>432_bases
ATGCAAGAAATTATGCAATTTGTTGGCCGTCATCCCATACTGAGTATCGCCTGGATTGCGTTACTGGTGGCGGTTTTATT
TACCACGTTCAAAGGTCTGACTTCAAAAGTTAAGGTGATTACACGCGGCGAAGCCACGCGCCTTATCAACAAAGAGGACG
CCGTTGTTGTGGATTTACGTCAACGTGACGATTTCCGTAAAGGCCATATCGCTGGCGCGACCAATTTGCTGCCGAGCGAA
ATCAAAGCCAACAATGTTGGCGAACTGGAAAAGCACAAAGACAAGCCAATTATCGTGGTCGACGGTTCTGGTATGCAGTG
CCAGGAATCCGCTAACGCGCTGACAAAAGCCGGCTTTGAAAAGGTCTTTGTGTTGAAAGAAGGCGTAGCAGGCTGGAGCG
GCGAGAATCTGCCTCTGGTGCGCGGTAAGTGA

Upstream 100 bases:

>100_bases
AAAATGCATTCCAGTGCACGCTCTGGCTGTATTTGCGCCACTGCGCAGGTATACTCCTTTCCTGGTTTTTTAATCACTAC
GTCGGGAGTTGTTACCCCCC

Downstream 100 bases:

>100_bases
TTACCCGTCGTTTTCATGACGCAAGGGGAATGACTTGCCCTTGCGTCGACATGAAATCCATCGGGTAAAAAACAGGAGCG
AAGTCATGGCCAATATTGAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 143; Mature: 143

Protein sequence:

>143_residues
MQEIMQFVGRHPILSIAWIALLVAVLFTTFKGLTSKVKVITRGEATRLINKEDAVVVDLRQRDDFRKGHIAGATNLLPSE
IKANNVGELEKHKDKPIIVVDGSGMQCQESANALTKAGFEKVFVLKEGVAGWSGENLPLVRGK

Sequences:

>Translated_143_residues
MQEIMQFVGRHPILSIAWIALLVAVLFTTFKGLTSKVKVITRGEATRLINKEDAVVVDLRQRDDFRKGHIAGATNLLPSE
IKANNVGELEKHKDKPIIVVDGSGMQCQESANALTKAGFEKVFVLKEGVAGWSGENLPLVRGK
>Mature_143_residues
MQEIMQFVGRHPILSIAWIALLVAVLFTTFKGLTSKVKVITRGEATRLINKEDAVVVDLRQRDDFRKGHIAGATNLLPSE
IKANNVGELEKHKDKPIIVVDGSGMQCQESANALTKAGFEKVFVLKEGVAGWSGENLPLVRGK

Specific function: Unknown

COG id: COG0607

COG function: function code P; Rhodanese-related sulfurtransferase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 rhodanese domain [H]

Homologues:

Organism=Escherichia coli, GI1790040, Length=143, Percent_Identity=93.7062937062937, Blast_Score=275, Evalue=7e-76,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001763 [H]

Pfam domain/function: PF00581 Rhodanese [H]

EC number: NA

Molecular weight: Translated: 15665; Mature: 15665

Theoretical pI: Translated: 10.07; Mature: 10.07

Prosite motif: PS50206 RHODANESE_3

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQEIMQFVGRHPILSIAWIALLVAVLFTTFKGLTSKVKVITRGEATRLINKEDAVVVDLR
CHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCHHHHCCCCCEEEEEEC
QRDDFRKGHIAGATNLLPSEIKANNVGELEKHKDKPIIVVDGSGMQCQESANALTKAGFE
CCCCCCCCCCCCCCCCCCCHHCCCCCCCHHHCCCCCEEEECCCCCCHHHHHHHHHHHCHH
KVFVLKEGVAGWSGENLPLVRGK
EEEEECCCCCCCCCCCCCEECCC
>Mature Secondary Structure
MQEIMQFVGRHPILSIAWIALLVAVLFTTFKGLTSKVKVITRGEATRLINKEDAVVVDLR
CHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCHHHHCCCCCEEEEEEC
QRDDFRKGHIAGATNLLPSEIKANNVGELEKHKDKPIIVVDGSGMQCQESANALTKAGFE
CCCCCCCCCCCCCCCCCCCHHCCCCCCCHHHCCCCCEEEECCCCCCHHHHHHHHHHHCHH
KVFVLKEGVAGWSGENLPLVRGK
EEEEECCCCCCCCCCCCCEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]