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The map label for this gene is waaP [H]

Identifier: 29144077

GI number: 29144077

Start: 3917051

End: 3917848

Strand: Direct

Name: waaP [H]

Synonym: t3797

Alternate gene names: 29144077

Gene position: 3917051-3917848 (Clockwise)

Preceding gene: 29144076

Following gene: 29144078

Centisome position: 81.74

GC content: 45.86

Gene sequence:

>798_bases
ATGGTTGAGCTGAAAGCGCCGTTAACCACACTATGGCGCGGTAAAGATGCTTTTGAGGAAGTGAAAACGTTACAGGGCGA
AGTGTTCAGAGAACTGGAGATGCGTCGAACATTGCGGTTTGAGCTGGACGGCAAAAGCTACTTCCTGAAGTGGCATAAAG
GCACTTCGCTGAAAGAAATTGTGAAGAACCTGATTTCGTTACGTATGCCTGTTCTGGGCGCTGACAGAGAATGGCACGCC
ATTCATCGTCTACATGAGCTGGGCGTTGATACGATGCACGGCGTTGGTTTTGGTGAAAAAGGCGTAAACCCGCTAACCAG
AACATCATTTATTATCACCGAAGATTTAACGCCTACCATTAGCCTTGAAGACTACTGTGTTGACTGGGCTGTTAATCCAC
CGGACGCGCAGGTGAAGTGGATGATTATTAAGCGTGTTGCGACTATGGTACGTAAAATGCACGCCGGGGGAATTAACCAT
CGCGACTGTTATATTTGCCACTTTCTTCTGCATTTACCTTTCACTGGTCGCGAAGAGGATTTAAAAATCTCCGTAATCGA
CCTGCATCGCGCGCAGATACGTCAGCACGTTCCCCTTCGCTGGCGTGACAAAGATTTAATTGGGCTTTATTTTTCTTCAA
TGAATATTGGCCTGACTCAGCGAGATATATTCCGGTTTATGCGTGAGTATTTCTCACTCCCCCTGCGAGAGATTTTGCAA
AAAGACTCGGGGTTGATTCATCAGGCGGATGTTAAAGCCGCTCGAATTAAAGAAAGAACAATAAGAAAAAATCTTTAA

Upstream 100 bases:

>100_bases
TTACGCAGCGCCTGGGCTGAAAATGCGCGGTATTATGCTGATACCCAGGATTTATACAGCTTACCGGAGAAGGCCGCAGA
TATTATCACAGGTGATTTAG

Downstream 100 bases:

>100_bases
ATTATTATACTGACTTATTATTTGATTTGGACTACATGTCATGAAAGTATTAATTATAAATGATACAGGTAACTCTTATC
ATTGGGGATGTTATGGAACA

Product: lipopolysaccharide core biosynthesis protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 265; Mature: 265

Protein sequence:

>265_residues
MVELKAPLTTLWRGKDAFEEVKTLQGEVFRELEMRRTLRFELDGKSYFLKWHKGTSLKEIVKNLISLRMPVLGADREWHA
IHRLHELGVDTMHGVGFGEKGVNPLTRTSFIITEDLTPTISLEDYCVDWAVNPPDAQVKWMIIKRVATMVRKMHAGGINH
RDCYICHFLLHLPFTGREEDLKISVIDLHRAQIRQHVPLRWRDKDLIGLYFSSMNIGLTQRDIFRFMREYFSLPLREILQ
KDSGLIHQADVKAARIKERTIRKNL

Sequences:

>Translated_265_residues
MVELKAPLTTLWRGKDAFEEVKTLQGEVFRELEMRRTLRFELDGKSYFLKWHKGTSLKEIVKNLISLRMPVLGADREWHA
IHRLHELGVDTMHGVGFGEKGVNPLTRTSFIITEDLTPTISLEDYCVDWAVNPPDAQVKWMIIKRVATMVRKMHAGGINH
RDCYICHFLLHLPFTGREEDLKISVIDLHRAQIRQHVPLRWRDKDLIGLYFSSMNIGLTQRDIFRFMREYFSLPLREILQ
KDSGLIHQADVKAARIKERTIRKNL
>Mature_265_residues
MVELKAPLTTLWRGKDAFEEVKTLQGEVFRELEMRRTLRFELDGKSYFLKWHKGTSLKEIVKNLISLRMPVLGADREWHA
IHRLHELGVDTMHGVGFGEKGVNPLTRTSFIITEDLTPTISLEDYCVDWAVNPPDAQVKWMIIKRVATMVRKMHAGGINH
RDCYICHFLLHLPFTGREEDLKISVIDLHRAQIRQHVPLRWRDKDLIGLYFSSMNIGLTQRDIFRFMREYFSLPLREILQ
KDSGLIHQADVKAARIKERTIRKNL

Specific function: Catalyzes the phosphorylation of heptose(I) of the outer membrane lipopolysaccharide core [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the protein kinase superfamily. KdkA/rfaP family [H]

Homologues:

Organism=Escherichia coli, GI1790060, Length=265, Percent_Identity=81.8867924528302, Blast_Score=455, Evalue=1e-129,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011009
- InterPro:   IPR017172
- InterPro:   IPR010440 [H]

Pfam domain/function: PF06293 Kdo [H]

EC number: 2.7.-.-

Molecular weight: Translated: 31041; Mature: 31041

Theoretical pI: Translated: 9.92; Mature: 9.92

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVELKAPLTTLWRGKDAFEEVKTLQGEVFRELEMRRTLRFELDGKSYFLKWHKGTSLKEI
CEECCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHEEEEECCCEEEEEECCCCCHHHH
VKNLISLRMPVLGADREWHAIHRLHELGVDTMHGVGFGEKGVNPLTRTSFIITEDLTPTI
HHHHHHHHCCCCCCCCHHHHHHHHHHHCCHHHCCCCCCCCCCCCCHHCEEEEEECCCCCE
SLEDYCVDWAVNPPDAQVKWMIIKRVATMVRKMHAGGINHRDCYICHFLLHLPFTGREED
EHHHEEEEECCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCCCC
LKISVIDLHRAQIRQHVPLRWRDKDLIGLYFSSMNIGLTQRDIFRFMREYFSLPLREILQ
CEEEEEEHHHHHHHHCCCCEECCCCEEEEEEECCCCCCCHHHHHHHHHHHHCCCHHHHHH
KDSGLIHQADVKAARIKERTIRKNL
HCCCCEEHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MVELKAPLTTLWRGKDAFEEVKTLQGEVFRELEMRRTLRFELDGKSYFLKWHKGTSLKEI
CEECCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHEEEEECCCEEEEEECCCCCHHHH
VKNLISLRMPVLGADREWHAIHRLHELGVDTMHGVGFGEKGVNPLTRTSFIITEDLTPTI
HHHHHHHHCCCCCCCCHHHHHHHHHHHCCHHHCCCCCCCCCCCCCHHCEEEEEECCCCCE
SLEDYCVDWAVNPPDAQVKWMIIKRVATMVRKMHAGGINHRDCYICHFLLHLPFTGREED
EHHHEEEEECCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCCCC
LKISVIDLHRAQIRQHVPLRWRDKDLIGLYFSSMNIGLTQRDIFRFMREYFSLPLREILQ
CEEEEEEHHHHHHHHCCCCEECCCCEEEEEEECCCCCCCHHHHHHHHHHHHCCCHHHHHH
KDSGLIHQADVKAARIKERTIRKNL
HCCCCEEHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9535865; 11677609; 8444813 [H]