Definition | Salmonella enterica subsp. enterica serovar Typhi str. Ty2 chromosome, complete genome. |
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Accession | NC_004631 |
Length | 4,791,961 |
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The map label for this gene is yiiG [H]
Identifier: 29143882
GI number: 29143882
Start: 3680853
End: 3681884
Strand: Direct
Name: yiiG [H]
Synonym: t3581
Alternate gene names: 29143882
Gene position: 3680853-3681884 (Clockwise)
Preceding gene: 29143880
Following gene: 29143884
Centisome position: 76.81
GC content: 44.19
Gene sequence:
>1032_bases ATGAAAAAGGATTTGTTATCATCAATTATTATCGCTATGCTGATGACTGCCGGGCTAAGCGCTTGTGATGAAAAAAAAGC GGACGAACAACCTGTAGCTCAGAGTGCGGATTCATCAGCGAGCAATACACAATCCACATCAGCGGAAAGCGCAGATGCGA ACGATGTTCTTAACCAAAAGCTGAATGTTTACATTGATTGTTATAATAATCTCCAGGCAGATATTTACCGTGCTGTAAAT CGTTATGCTAACACATTCGACGATTTCCGCACCGGTCCTACCGGTAAGGAAGACGATCCCTCTCCGCTGGTTCCTGTGTA TCCTGCATTTATCCAGGACTGCCGGAAAGACATCAAGGCGGCGGCTGAATTAAAGCCGGCGTTTGCCTCTCTGGATAGTG CTGCTCTGGCATTTATTAATGCGGCTGGGCCACTAGCTGAAACAATCAATAGTATGAATAAATACTATGATCAAGATAAC TTCAAGGATGATGCCTTTGCTGGCGCTAAAGCGTTCCATAAAACGTTTATAAAACAGTTCGATGAGTTTGATCCCATTGC GAAAAAATATATCGCCGAGATTACCATTATGAGTAAGCAGCATGCGGCTAATGAAATTAAGGCGACCGAGAAGAAAGAAG GTAAATCCATTAAGTACTATACGCTTTTGACGATGCAGGAAGCCGAGACGCTTAATGACGCTGTAGCTGATGCTTCTTTT GATGTGGCGGCAGTAAGCAAACAGCTCGCTGATTTTGAAGAGCATACTCAGAAGCTAAACGAGAAGATCAACGTTGATAT AGATAAACATCGTAGCTTCCCTGGTTTTATTTCTGAGCTGGAAAAATTCCAGGGCAAGGTGAAAAAACGCATTCGGCGCG TGCGCGATAACGTGGCGTATACCTCGCATGAGCAGGACTACCTCAATAGCGGCAGCGGCGATATGGTAGATGGTTCTTAT AAGGCTGTGGTTAAAGCTTATAACGAGCTCATCGACACCTATAATGGCTATCATCTTGAGCGTGAGTTCTAA
Upstream 100 bases:
>100_bases ATATGGATTAAGTATTTTTTGTGTTGAATAAATCACATACCTGTTTTTTTCATTAAAATGAATCTGTAAATTTCAATGAT ATTATTTATAGGTTATTCTA
Downstream 100 bases:
>100_bases GCTTTTCACGCTGCAAATCGCGTGCATATGACCGCTGAACTGAGCAAATAAGTCGTTACCGACTGTCGAAAGAGCGCCCC AGGGGCGCTTTTTTCGTTCG
Product: lipoprotein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 343; Mature: 343
Protein sequence:
>343_residues MKKDLLSSIIIAMLMTAGLSACDEKKADEQPVAQSADSSASNTQSTSAESADANDVLNQKLNVYIDCYNNLQADIYRAVN RYANTFDDFRTGPTGKEDDPSPLVPVYPAFIQDCRKDIKAAAELKPAFASLDSAALAFINAAGPLAETINSMNKYYDQDN FKDDAFAGAKAFHKTFIKQFDEFDPIAKKYIAEITIMSKQHAANEIKATEKKEGKSIKYYTLLTMQEAETLNDAVADASF DVAAVSKQLADFEEHTQKLNEKINVDIDKHRSFPGFISELEKFQGKVKKRIRRVRDNVAYTSHEQDYLNSGSGDMVDGSY KAVVKAYNELIDTYNGYHLEREF
Sequences:
>Translated_343_residues MKKDLLSSIIIAMLMTAGLSACDEKKADEQPVAQSADSSASNTQSTSAESADANDVLNQKLNVYIDCYNNLQADIYRAVN RYANTFDDFRTGPTGKEDDPSPLVPVYPAFIQDCRKDIKAAAELKPAFASLDSAALAFINAAGPLAETINSMNKYYDQDN FKDDAFAGAKAFHKTFIKQFDEFDPIAKKYIAEITIMSKQHAANEIKATEKKEGKSIKYYTLLTMQEAETLNDAVADASF DVAAVSKQLADFEEHTQKLNEKINVDIDKHRSFPGFISELEKFQGKVKKRIRRVRDNVAYTSHEQDYLNSGSGDMVDGSY KAVVKAYNELIDTYNGYHLEREF >Mature_343_residues MKKDLLSSIIIAMLMTAGLSACDEKKADEQPVAQSADSSASNTQSTSAESADANDVLNQKLNVYIDCYNNLQADIYRAVN RYANTFDDFRTGPTGKEDDPSPLVPVYPAFIQDCRKDIKAAAELKPAFASLDSAALAFINAAGPLAETINSMNKYYDQDN FKDDAFAGAKAFHKTFIKQFDEFDPIAKKYIAEITIMSKQHAANEIKATEKKEGKSIKYYTLLTMQEAETLNDAVADASF DVAAVSKQLADFEEHTQKLNEKINVDIDKHRSFPGFISELEKFQGKVKKRIRRVRDNVAYTSHEQDYLNSGSGDMVDGSY KAVVKAYNELIDTYNGYHLEREF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1790330, Length=357, Percent_Identity=35.0140056022409, Blast_Score=228, Evalue=6e-61,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 38274; Mature: 38274
Theoretical pI: Translated: 4.89; Mature: 4.89
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKDLLSSIIIAMLMTAGLSACDEKKADEQPVAQSADSSASNTQSTSAESADANDVLNQK CCHHHHHHHHHHHHHHHCCHHHHHCCCCCCHHHHCCCCCCCCCCCCCCCCCCHHHHHHCC LNVYIDCYNNLQADIYRAVNRYANTFDDFRTGPTGKEDDPSPLVPVYPAFIQDCRKDIKA CEEEEEEHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH AAELKPAFASLDSAALAFINAAGPLAETINSMNKYYDQDNFKDDAFAGAKAFHKTFIKQF HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHH DEFDPIAKKYIAEITIMSKQHAANEIKATEKKEGKSIKYYTLLTMQEAETLNDAVADASF HCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEHHHHHHHHHHHHCCCC DVAAVSKQLADFEEHTQKLNEKINVDIDKHRSFPGFISELEKFQGKVKKRIRRVRDNVAY HHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCC TSHEQDYLNSGSGDMVDGSYKAVVKAYNELIDTYNGYHLEREF CCCCHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCCEECCCC >Mature Secondary Structure MKKDLLSSIIIAMLMTAGLSACDEKKADEQPVAQSADSSASNTQSTSAESADANDVLNQK CCHHHHHHHHHHHHHHHCCHHHHHCCCCCCHHHHCCCCCCCCCCCCCCCCCCHHHHHHCC LNVYIDCYNNLQADIYRAVNRYANTFDDFRTGPTGKEDDPSPLVPVYPAFIQDCRKDIKA CEEEEEEHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH AAELKPAFASLDSAALAFINAAGPLAETINSMNKYYDQDNFKDDAFAGAKAFHKTFIKQF HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHH DEFDPIAKKYIAEITIMSKQHAANEIKATEKKEGKSIKYYTLLTMQEAETLNDAVADASF HCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEHHHHHHHHHHHHCCCC DVAAVSKQLADFEEHTQKLNEKINVDIDKHRSFPGFISELEKFQGKVKKRIRRVRDNVAY HHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCC TSHEQDYLNSGSGDMVDGSYKAVVKAYNELIDTYNGYHLEREF CCCCHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCCEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8346018; 9278503 [H]