| Definition | Salmonella enterica subsp. enterica serovar Typhi str. Ty2 chromosome, complete genome. |
|---|---|
| Accession | NC_004631 |
| Length | 4,791,961 |
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The map label for this gene is udhA [H]
Identifier: 29143805
GI number: 29143805
Start: 3591481
End: 3592881
Strand: Direct
Name: udhA [H]
Synonym: t3499
Alternate gene names: 29143805
Gene position: 3591481-3592881 (Clockwise)
Preceding gene: 29143802
Following gene: 29143810
Centisome position: 74.95
GC content: 52.61
Gene sequence:
>1401_bases ATGCCACATTCCTGGGATTATGATGCAGTCGTCATAGGGTCAGGCCCCGGCGGTGAAGGCGCTGCAATGGGTCTGGTTAA GCAAGGAGCACGCGTCGCGGTGATTGAGCGTTATCATAACGTTGGCGGCGGATGTACCCACTGGGGCACCATTCCATCCA AAGCCCTTCGCCACGCCGTCAGCCGCATTATTGAATTTAATCAAAACCCGCTCTATAGCGACCACTCCCGTCTCCTTCGT TCTTCTTTCGCCGATATCCTTAATCATGCCGATAACGTGATTAATCAACAAACGCGTATGCGTCAGGGGTTTTATGAGCG TAACCACTGTGAAATCTTGCAGGGCAACGCCCATTTTATTGACGAACATACCCTGGCGCTGGAATGCCATGACGGCACGG TTGAAACCCTGACGGCAGAAAAATTTGTTATTGCCTGTGGTTCGCGTCCTTACCATCCCAATGATGTGGATTTCTCGCAT CCGCGCATTTATGACAGCGACTCAATCCTGAGTCTCCACCATGAACCGCGCCACGTTATTATTTACGGCGCAGGCGTTAT CGGCTGCGAATATGCGTCCATATTCCGCGGTATGGATGTGAAAGTGGATCTGATCAACACCCGCGATCGCCTGCTGGCCT TTCTCGATCAGGAGATGTCCGACTCTCTCTCTTACCATTTCTGGAATAGCGGCGTGGTTATTCGCCACAATGAAGAGTAT GAGAAAATCGAAGGCTGCGATGATGGCGTCATCATGCACCTGAAATCCGGCAAAAAACTGAAGGCTGACTGCCTGCTCTA TGCTAATGGCCGTACCGGTAACACCGATTCGCTGGCGCTGGAGAATATTGGTCTGGAAACAGACAGCCGTGGACAGCTCA AAGTCAACAGTATGTACCAGACCGCCCTGCCGCACGTCTATGCGGTGGGCGACGTGATTGGCTATCCCAGTCTGGCCTCC GCCGCCTACGATCAGGGGCGTATTGCAGCGCAGGCGCTGGTGAAAGGCGAAGCGACCGCGCATCTTATCGAAGATATCCC CACCGGGATTTATACCATTCCGGAAATCAGTTCTGTCGGCAAAACCGAGCAGCAGTTAACGGCAATGAAAGTGCCTTACG AAGTGGGCCGCGCGCAGTTTAAGCATCTGGCGCGAGCGCAAATCGTCGGCATGAACGTCGGCACGCTAAAAATTCTCTTT CACCGCGAAACCAAAGAAATTCTGGGGATTCACTGCTTTGGCGAACGCGCCGCCGAAATTATTCATATCGGCCAGGCGAT CATGGAGCAGAAAGGTGGCGGTAACACCATCGAATACTTCGTTAACACCACCTTTAACTACCCAACCATGGCGGAAGCTT ATCGGGTTGCGGCGTTGAACGGCTTAAACCGCCTGTTTTAA
Upstream 100 bases:
>100_bases GTGCTCCGGCTTCGCAAAAAAGCACAACGATAATTGGGTTAAAGCTGGGCAAATGTTATCATCGTGTTTATTTTATGTAT AAAAACAGGTGAGTAATACC
Downstream 100 bases:
>100_bases CGCCTTGTCGAAATGTCCATCCATTGCGCCACGGATGGCCTCTGCCAGTTGCTCATAACGGCTACGCAGCGGCGATCCCG GGCGATAAACCAGCCCCACG
Product: soluble pyridine nucleotide transhydrogenase
Products: NA
Alternate protein names: STH; NAD(P)(+) transhydrogenase [B-specific] [H]
Number of amino acids: Translated: 466; Mature: 465
Protein sequence:
>466_residues MPHSWDYDAVVIGSGPGGEGAAMGLVKQGARVAVIERYHNVGGGCTHWGTIPSKALRHAVSRIIEFNQNPLYSDHSRLLR SSFADILNHADNVINQQTRMRQGFYERNHCEILQGNAHFIDEHTLALECHDGTVETLTAEKFVIACGSRPYHPNDVDFSH PRIYDSDSILSLHHEPRHVIIYGAGVIGCEYASIFRGMDVKVDLINTRDRLLAFLDQEMSDSLSYHFWNSGVVIRHNEEY EKIEGCDDGVIMHLKSGKKLKADCLLYANGRTGNTDSLALENIGLETDSRGQLKVNSMYQTALPHVYAVGDVIGYPSLAS AAYDQGRIAAQALVKGEATAHLIEDIPTGIYTIPEISSVGKTEQQLTAMKVPYEVGRAQFKHLARAQIVGMNVGTLKILF HRETKEILGIHCFGERAAEIIHIGQAIMEQKGGGNTIEYFVNTTFNYPTMAEAYRVAALNGLNRLF
Sequences:
>Translated_466_residues MPHSWDYDAVVIGSGPGGEGAAMGLVKQGARVAVIERYHNVGGGCTHWGTIPSKALRHAVSRIIEFNQNPLYSDHSRLLR SSFADILNHADNVINQQTRMRQGFYERNHCEILQGNAHFIDEHTLALECHDGTVETLTAEKFVIACGSRPYHPNDVDFSH PRIYDSDSILSLHHEPRHVIIYGAGVIGCEYASIFRGMDVKVDLINTRDRLLAFLDQEMSDSLSYHFWNSGVVIRHNEEY EKIEGCDDGVIMHLKSGKKLKADCLLYANGRTGNTDSLALENIGLETDSRGQLKVNSMYQTALPHVYAVGDVIGYPSLAS AAYDQGRIAAQALVKGEATAHLIEDIPTGIYTIPEISSVGKTEQQLTAMKVPYEVGRAQFKHLARAQIVGMNVGTLKILF HRETKEILGIHCFGERAAEIIHIGQAIMEQKGGGNTIEYFVNTTFNYPTMAEAYRVAALNGLNRLF >Mature_465_residues PHSWDYDAVVIGSGPGGEGAAMGLVKQGARVAVIERYHNVGGGCTHWGTIPSKALRHAVSRIIEFNQNPLYSDHSRLLRS SFADILNHADNVINQQTRMRQGFYERNHCEILQGNAHFIDEHTLALECHDGTVETLTAEKFVIACGSRPYHPNDVDFSHP RIYDSDSILSLHHEPRHVIIYGAGVIGCEYASIFRGMDVKVDLINTRDRLLAFLDQEMSDSLSYHFWNSGVVIRHNEEYE KIEGCDDGVIMHLKSGKKLKADCLLYANGRTGNTDSLALENIGLETDSRGQLKVNSMYQTALPHVYAVGDVIGYPSLASA AYDQGRIAAQALVKGEATAHLIEDIPTGIYTIPEISSVGKTEQQLTAMKVPYEVGRAQFKHLARAQIVGMNVGTLKILFH RETKEILGIHCFGERAAEIIHIGQAIMEQKGGGNTIEYFVNTTFNYPTMAEAYRVAALNGLNRLF
Specific function: Conversion of NADPH, generated by peripheral catabolic pathways, to NADH, which can enter the respiratory chain for energy generation [H]
COG id: COG1249
COG function: function code C; Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family [H]
Homologues:
Organism=Homo sapiens, GI91199540, Length=474, Percent_Identity=28.9029535864979, Blast_Score=191, Evalue=1e-48, Organism=Homo sapiens, GI50301238, Length=460, Percent_Identity=26.5217391304348, Blast_Score=132, Evalue=6e-31, Organism=Homo sapiens, GI22035672, Length=491, Percent_Identity=26.4765784114053, Blast_Score=121, Evalue=2e-27, Organism=Homo sapiens, GI148277065, Length=399, Percent_Identity=25.5639097744361, Blast_Score=101, Evalue=1e-21, Organism=Homo sapiens, GI148277071, Length=400, Percent_Identity=25.75, Blast_Score=101, Evalue=1e-21, Organism=Homo sapiens, GI33519430, Length=399, Percent_Identity=25.5639097744361, Blast_Score=101, Evalue=2e-21, Organism=Homo sapiens, GI33519428, Length=399, Percent_Identity=25.5639097744361, Blast_Score=101, Evalue=2e-21, Organism=Homo sapiens, GI33519426, Length=399, Percent_Identity=25.5639097744361, Blast_Score=101, Evalue=2e-21, Organism=Homo sapiens, GI291045266, Length=431, Percent_Identity=23.6658932714617, Blast_Score=96, Evalue=1e-19, Organism=Homo sapiens, GI291045268, Length=350, Percent_Identity=24.8571428571429, Blast_Score=83, Evalue=6e-16, Organism=Homo sapiens, GI65787454, Length=270, Percent_Identity=27.4074074074074, Blast_Score=71, Evalue=2e-12, Organism=Homo sapiens, GI226437568, Length=288, Percent_Identity=26.7361111111111, Blast_Score=71, Evalue=3e-12, Organism=Homo sapiens, GI21389617, Length=288, Percent_Identity=26.7361111111111, Blast_Score=71, Evalue=3e-12, Organism=Escherichia coli, GI87082354, Length=466, Percent_Identity=96.9957081545064, Blast_Score=947, Evalue=0.0, Organism=Escherichia coli, GI1786307, Length=458, Percent_Identity=28.1659388646288, Blast_Score=188, Evalue=5e-49, Organism=Escherichia coli, GI87081717, Length=464, Percent_Identity=27.801724137931, Blast_Score=158, Evalue=9e-40, Organism=Escherichia coli, GI1789915, Length=433, Percent_Identity=27.2517321016166, Blast_Score=141, Evalue=9e-35, Organism=Caenorhabditis elegans, GI32565766, Length=465, Percent_Identity=29.6774193548387, Blast_Score=199, Evalue=3e-51, Organism=Caenorhabditis elegans, GI17557007, Length=470, Percent_Identity=24.8936170212766, Blast_Score=111, Evalue=6e-25, Organism=Caenorhabditis elegans, GI71983419, Length=367, Percent_Identity=26.9754768392371, Blast_Score=105, Evalue=6e-23, Organism=Caenorhabditis elegans, GI71983429, Length=367, Percent_Identity=26.9754768392371, Blast_Score=105, Evalue=7e-23, Organism=Caenorhabditis elegans, GI71982272, Length=344, Percent_Identity=24.1279069767442, Blast_Score=83, Evalue=3e-16, Organism=Caenorhabditis elegans, GI17559934, Length=286, Percent_Identity=24.4755244755245, Blast_Score=69, Evalue=4e-12, Organism=Saccharomyces cerevisiae, GI6321091, Length=482, Percent_Identity=28.2157676348548, Blast_Score=172, Evalue=9e-44, Organism=Saccharomyces cerevisiae, GI6325240, Length=471, Percent_Identity=26.1146496815287, Blast_Score=133, Evalue=5e-32, Organism=Saccharomyces cerevisiae, GI6325166, Length=461, Percent_Identity=24.9457700650759, Blast_Score=133, Evalue=7e-32, Organism=Drosophila melanogaster, GI21358499, Length=471, Percent_Identity=29.9363057324841, Blast_Score=196, Evalue=3e-50, Organism=Drosophila melanogaster, GI24640553, Length=487, Percent_Identity=29.3634496919918, Blast_Score=152, Evalue=5e-37, Organism=Drosophila melanogaster, GI24640549, Length=487, Percent_Identity=29.3634496919918, Blast_Score=152, Evalue=5e-37, Organism=Drosophila melanogaster, GI24640551, Length=487, Percent_Identity=29.3634496919918, Blast_Score=151, Evalue=7e-37, Organism=Drosophila melanogaster, GI17737741, Length=493, Percent_Identity=26.1663286004057, Blast_Score=132, Evalue=7e-31,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR016156 - InterPro: IPR013027 - InterPro: IPR004099 - InterPro: IPR001327 - InterPro: IPR022962 [H]
Pfam domain/function: PF00070 Pyr_redox; PF07992 Pyr_redox_2; PF02852 Pyr_redox_dim [H]
EC number: =1.6.1.1 [H]
Molecular weight: Translated: 51609; Mature: 51478
Theoretical pI: Translated: 6.51; Mature: 6.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPHSWDYDAVVIGSGPGGEGAAMGLVKQGARVAVIERYHNVGGGCTHWGTIPSKALRHAV CCCCCCCCEEEEECCCCCCCHHHHHHHCCCEEEEEHHHHCCCCCCCCCCCCHHHHHHHHH SRIIEFNQNPLYSDHSRLLRSSFADILNHADNVINQQTRMRQGFYERNHCEILQGNAHFI HHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCEEE DEHTLALECHDGTVETLTAEKFVIACGSRPYHPNDVDFSHPRIYDSDSILSLHHEPRHVI ECEEEEEEECCCCEEEEECCEEEEEECCCCCCCCCCCCCCCEEECCCCEEEEECCCCEEE IYGAGVIGCEYASIFRGMDVKVDLINTRDRLLAFLDQEMSDSLSYHFWNSGVVIRHNEEY EEECCCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHCCCEEEEECCCEEEEECCCH EKIEGCDDGVIMHLKSGKKLKADCLLYANGRTGNTDSLALENIGLETDSRGQLKVNSMYQ HHHCCCCCCEEEEECCCCEEEEEEEEEECCCCCCCCCEEEECCCCCCCCCCCEEECCHHH TALPHVYAVGDVIGYPSLASAAYDQGRIAAQALVKGEATAHLIEDIPTGIYTIPEISSVG HHCCHHEEHHHHHCCCCHHHHHHHCCHHHHHHHHCCCHHHHHHHHCCCCEEECCCCHHCC KTEQQLTAMKVPYEVGRAQFKHLARAQIVGMNVGTLKILFHRETKEILGIHCFGERAAEI CCHHHHHHHCCCHHHHHHHHHHHHHHEEEECCCCEEEEEEEECCHHHEEEEECCHHHHHH IHIGQAIMEQKGGGNTIEYFVNTTFNYPTMAEAYRVAALNGLNRLF HHHHHHHHHCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHCC >Mature Secondary Structure PHSWDYDAVVIGSGPGGEGAAMGLVKQGARVAVIERYHNVGGGCTHWGTIPSKALRHAV CCCCCCCEEEEECCCCCCCHHHHHHHCCCEEEEEHHHHCCCCCCCCCCCCHHHHHHHHH SRIIEFNQNPLYSDHSRLLRSSFADILNHADNVINQQTRMRQGFYERNHCEILQGNAHFI HHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCEEE DEHTLALECHDGTVETLTAEKFVIACGSRPYHPNDVDFSHPRIYDSDSILSLHHEPRHVI ECEEEEEEECCCCEEEEECCEEEEEECCCCCCCCCCCCCCCEEECCCCEEEEECCCCEEE IYGAGVIGCEYASIFRGMDVKVDLINTRDRLLAFLDQEMSDSLSYHFWNSGVVIRHNEEY EEECCCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHCCCEEEEECCCEEEEECCCH EKIEGCDDGVIMHLKSGKKLKADCLLYANGRTGNTDSLALENIGLETDSRGQLKVNSMYQ HHHCCCCCCEEEEECCCCEEEEEEEEEECCCCCCCCCEEEECCCCCCCCCCCEEECCHHH TALPHVYAVGDVIGYPSLASAAYDQGRIAAQALVKGEATAHLIEDIPTGIYTIPEISSVG HHCCHHEEHHHHHCCCCHHHHHHHCCHHHHHHHHCCCHHHHHHHHCCCCEEECCCCHHCC KTEQQLTAMKVPYEVGRAQFKHLARAQIVGMNVGTLKILFHRETKEILGIHCFGERAAEI CCHHHHHHHCCCHHHHHHHHHHHHHHEEEECCCCEEEEEEEECCHHHEEEEECCHHHHHH IHIGQAIMEQKGGGNTIEYFVNTTFNYPTMAEAYRVAALNGLNRLF HHHHHHHHHCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA