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The map label for this gene is tnpA [H]

Identifier: 29143766

GI number: 29143766

Start: 3536217

End: 3536675

Strand: Direct

Name: tnpA [H]

Synonym: t3447

Alternate gene names: 29143766

Gene position: 3536217-3536675 (Clockwise)

Preceding gene: 29143765

Following gene: 29143768

Centisome position: 73.79

GC content: 46.62

Gene sequence:

>459_bases
ATGGGGGACGAAAAGAGCTTAGCGCACACCCGATGGAACTGTAAATATCACATAGTTTTCGCGCCAAAATACCGAAGACA
GGCGTTCTACGGAGAGAAGCGTAGAGCGGTAGGCAGCATTTTAAGGAAACTATGTGAGTGGAAAAATGTGAACATTCTGG
AAGCGGAATGCTGTGCAGATCATATCCATATGCTTCTGGAGATCCCGCCGAAGATGAGCGTGTCAGGGTTTATGGGTTAT
CTGAAGGGAAAAAGTAGCCTGATGCTTTATGAGCAGTTTGGCGATTTGAAATTCAAATACAGGAACAGGGAGTTCTGGTG
CAGAGGGTACTACGTCGATACGGTGGGTAAGAACACGGCGAAGATACAGGATTACATAAAGCACCAGCTTGAAGAGGATA
AAATGGGTGAGCAGTTATCGATCCCTTATCCTAGCAGCCCGTTTACGGGCCGTAAGTAA

Upstream 100 bases:

>100_bases
TTCAGCTTTAAGCCAGTTATTAAAACCCCTTTTGATTTGTTAAAACATCTTGCGGTCTGGCAACTGCAAAAGTTCAACAA
GAAATCAAAAGGGGGTCCCA

Downstream 100 bases:

>100_bases
CGAAGTTTGATGCAAATGTCAGATCGTATGCGCCTGTTAGGGCGCGGCTGGTAAGAGAGCCTTACAGGCGCATCAGAAAA
ACCTCCGGCTATGCCGGAGG

Product: transposase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 152; Mature: 151

Protein sequence:

>152_residues
MGDEKSLAHTRWNCKYHIVFAPKYRRQAFYGEKRRAVGSILRKLCEWKNVNILEAECCADHIHMLLEIPPKMSVSGFMGY
LKGKSSLMLYEQFGDLKFKYRNREFWCRGYYVDTVGKNTAKIQDYIKHQLEEDKMGEQLSIPYPSSPFTGRK

Sequences:

>Translated_152_residues
MGDEKSLAHTRWNCKYHIVFAPKYRRQAFYGEKRRAVGSILRKLCEWKNVNILEAECCADHIHMLLEIPPKMSVSGFMGY
LKGKSSLMLYEQFGDLKFKYRNREFWCRGYYVDTVGKNTAKIQDYIKHQLEEDKMGEQLSIPYPSSPFTGRK
>Mature_151_residues
GDEKSLAHTRWNCKYHIVFAPKYRRQAFYGEKRRAVGSILRKLCEWKNVNILEAECCADHIHMLLEIPPKMSVSGFMGYL
KGKSSLMLYEQFGDLKFKYRNREFWCRGYYVDTVGKNTAKIQDYIKHQLEEDKMGEQLSIPYPSSPFTGRK

Specific function: Involved in the transposition of the insertion sequence [H]

COG id: COG1943

COG function: function code L; Transposase and inactivated derivatives

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the transposase 17 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002686 [H]

Pfam domain/function: PF01797 Transposase_17 [H]

EC number: NA

Molecular weight: Translated: 17916; Mature: 17785

Theoretical pI: Translated: 9.61; Mature: 9.61

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.3 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
7.2 %Cys+Met (Translated Protein)
3.3 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
6.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGDEKSLAHTRWNCKYHIVFAPKYRRQAFYGEKRRAVGSILRKLCEWKNVNILEAECCAD
CCCCCCCCEEECCCEEEEEECCCHHHHHHHCHHHHHHHHHHHHHHCCCCCCEEEHHHHHH
HIHMLLEIPPKMSVSGFMGYLKGKSSLMLYEQFGDLKFKYRNREFWCRGYYVDTVGKNTA
HHHHHHHCCCCCCHHHHHHHHCCCCCEEEEECCCCEEEEECCCEEEEEEEEEECCCCCHH
KIQDYIKHQLEEDKMGEQLSIPYPSSPFTGRK
HHHHHHHHHHHHHHCCCEEECCCCCCCCCCCC
>Mature Secondary Structure 
GDEKSLAHTRWNCKYHIVFAPKYRRQAFYGEKRRAVGSILRKLCEWKNVNILEAECCAD
CCCCCCCEEECCCEEEEEECCCHHHHHHHCHHHHHHHHHHHHHHCCCCCCEEEHHHHHH
HIHMLLEIPPKMSVSGFMGYLKGKSSLMLYEQFGDLKFKYRNREFWCRGYYVDTVGKNTA
HHHHHHHCCCCCCHHHHHHHHCCCCCEEEEECCCCEEEEECCCEEEEEEEEEECCCCCHH
KIQDYIKHQLEEDKMGEQLSIPYPSSPFTGRK
HHHHHHHHHHHHHHCCCEEECCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11677608; 12644504 [H]