| Definition | Salmonella enterica subsp. enterica serovar Typhi str. Ty2 chromosome, complete genome. |
|---|---|
| Accession | NC_004631 |
| Length | 4,791,961 |
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The map label for this gene is 29143752
Identifier: 29143752
GI number: 29143752
Start: 3522329
End: 3523237
Strand: Direct
Name: 29143752
Synonym: t3431
Alternate gene names: NA
Gene position: 3522329-3523237 (Clockwise)
Preceding gene: 29143751
Following gene: 29143753
Centisome position: 73.5
GC content: 57.65
Gene sequence:
>909_bases ATGGCAGTGATTGACCTTTCGCAGTTGCCTGCGCCGCAGATTGTGGATGTGCCGGACTTTGATACGTTGCTTGCCGAACG CAAGGCAGAATTTGTGGCGCTTCATCCGAAAGATGAGCAGGAAGCAGTGAGCCGCACACTGGAACTGGAATCTGAACCCG TCACCAAATTGTTGCAGGAGAACGCTTATCGTGAGTTGCTTCTGCGCCAGCGCATTAACGAAGCCGCGCAGGCGGTGATG GCGGCTTATGCCATAGGGAGCGATCTGGACCAGCTCGCTGCCAATTACAACGTGAAACGCCTGACGGTGACGCCTGCTGA TAATGACGCTGTGCCGCCCGTCGCGGCTGTGATGGAAAGTGATGAAGCGTTACGCCTGCGTGTGCCTGCGGCTTTTGAAG GGCTTTCGGTTGCGGGGCCAACTGCCGCTTATGAATTTCATGCCCGAAGCGCCGACGGTCGGGTGGCGGATGCCAGTGCA ACCAGTCCGGCACCTGCAGAGGTGGTGCTGACTGTCCTGAGCCGCGAAGGCGATGGAACAGCAGAAAAAGACCTGCTGGA CGTGGTGGAAAAAGCTCTGAACAGTGAGAACGTCCGCCCGGTGGCTGACCGTCTTACGGTTCGCAGCGCAGAAATCATCC CGTACCGGGTGGAAGCCACTATTTTTCTCTATCCGGGACCGGAAGCAGAGCCGGTAATGGCAGCGGCAAAAGCCAGCCTG CAGAAGTACATCGCCAGTCAGACGCGTCTTGGTCGGGATATTCGCCGTAGCGCCATCTTTGCCGCCCTGCATGTTGAGGG TGTGCAGCGTGTGGAGCTGGCTTCTCCTCTGGCGGATATGGTCCTGAACAAAACACAGGCGGCATCATGTACGCAGTGGA GCGTAACCAACGGAGGAACGGATGAATAG
Upstream 100 bases:
>100_bases ACCATCAACAGCCATTTTGACGGTTCAATGGTGGTGGAGCTGACCGGGCGGCGTAATAACGGTGTACCTGTTTCCCTTTC CGTATCAACAGGAGCAGAGA
Downstream 100 bases:
>100_bases TCTGCTGCCACCGGGTTCAACACCACTGGAGCGCCGATTGGCGCAAACCTGCAGCGGGATTTCTGATCTGCAGGTGCCGC TTCGTGACTTGTGGAATCCG
Product: phage baseplate assembly protein
Products: NA
Alternate protein names: Baseplate Assembly Protein J; Baseplate J-Like Protein; Phage Baseplate Assembly Protein; Phage-Related Baseplate Assembly Protein; Bacteriophage Baseplate Assembly Protein; Bacteriophage Tail Fiber Protein; Phage Protein Gp; Phage Baseplate Assembly Protein J; Pyocin R2_PP Baseplate/Tail Fiber Protein; Bacteriophage Baseplate Assembly Protein J; Phage Baseplate Protein; Phage Baseplate J-Like Protein; Bacteriophage P2 Baseplate Assembly Protein GPJ; Prophage LambdaW5 Baseplate Assembly Protein J; Baseplate Assembly Protein GpJ; Baseplate Assembly Protein J Prophage; Baseplate Assembly-Like Protein; Baseplate Assembly Protein; Bacteriophage Baseplate Protein; Baseplate Protein Putative Phage Associated Protein; Prophage LambdaW1 Baseplate Assembly Protein J; Phage Baseplate Assembly; Phage Baseplate Assembly Protein GpJ; Phage Tail Protein; Prophage; GPJ Of Phage P2-Like; Phage P2 Baseplate Assembly Protein; Phage Baseplate-Like Protein; Phage Tail-Like Protein; Bacteriophage Protein; Phage P2 Baseplate Assembly GpJ-Like Protein; Prophage Baseplate Assembly Protein
Number of amino acids: Translated: 302; Mature: 301
Protein sequence:
>302_residues MAVIDLSQLPAPQIVDVPDFDTLLAERKAEFVALHPKDEQEAVSRTLELESEPVTKLLQENAYRELLLRQRINEAAQAVM AAYAIGSDLDQLAANYNVKRLTVTPADNDAVPPVAAVMESDEALRLRVPAAFEGLSVAGPTAAYEFHARSADGRVADASA TSPAPAEVVLTVLSREGDGTAEKDLLDVVEKALNSENVRPVADRLTVRSAEIIPYRVEATIFLYPGPEAEPVMAAAKASL QKYIASQTRLGRDIRRSAIFAALHVEGVQRVELASPLADMVLNKTQAASCTQWSVTNGGTDE
Sequences:
>Translated_302_residues MAVIDLSQLPAPQIVDVPDFDTLLAERKAEFVALHPKDEQEAVSRTLELESEPVTKLLQENAYRELLLRQRINEAAQAVM AAYAIGSDLDQLAANYNVKRLTVTPADNDAVPPVAAVMESDEALRLRVPAAFEGLSVAGPTAAYEFHARSADGRVADASA TSPAPAEVVLTVLSREGDGTAEKDLLDVVEKALNSENVRPVADRLTVRSAEIIPYRVEATIFLYPGPEAEPVMAAAKASL QKYIASQTRLGRDIRRSAIFAALHVEGVQRVELASPLADMVLNKTQAASCTQWSVTNGGTDE >Mature_301_residues AVIDLSQLPAPQIVDVPDFDTLLAERKAEFVALHPKDEQEAVSRTLELESEPVTKLLQENAYRELLLRQRINEAAQAVMA AYAIGSDLDQLAANYNVKRLTVTPADNDAVPPVAAVMESDEALRLRVPAAFEGLSVAGPTAAYEFHARSADGRVADASAT SPAPAEVVLTVLSREGDGTAEKDLLDVVEKALNSENVRPVADRLTVRSAEIIPYRVEATIFLYPGPEAEPVMAAAKASLQ KYIASQTRLGRDIRRSAIFAALHVEGVQRVELASPLADMVLNKTQAASCTQWSVTNGGTDE
Specific function: Unknown
COG id: COG3948
COG function: function code R; Phage-related baseplate assembly protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32514; Mature: 32383
Theoretical pI: Translated: 4.42; Mature: 4.42
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAVIDLSQLPAPQIVDVPDFDTLLAERKAEFVALHPKDEQEAVSRTLELESEPVTKLLQE CCEEECCCCCCCCEECCCCHHHHHHHCCCCEEEECCCCHHHHHHHHHHCCCHHHHHHHHH NAYRELLLRQRINEAAQAVMAAYAIGSDLDQLAANYNVKRLTVTPADNDAVPPVAAVMES HHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCEEEEEECCCCCCCCCHHHHHHCC DEALRLRVPAAFEGLSVAGPTAAYEFHARSADGRVADASATSPAPAEVVLTVLSREGDGT CCEEEEECCCHHCCCCCCCCCCEEEEECCCCCCCEECCCCCCCCHHHHHHHHHHCCCCCC AEKDLLDVVEKALNSENVRPVADRLTVRSAEIIPYRVEATIFLYPGPEAEPVMAAAKASL HHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCEEEEEEEEEEEEECCCCCCHHHHHHHHHH QKYIASQTRLGRDIRRSAIFAALHVEGVQRVELASPLADMVLNKTQAASCTQWSVTNGGT HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEECCCCCC DE CC >Mature Secondary Structure AVIDLSQLPAPQIVDVPDFDTLLAERKAEFVALHPKDEQEAVSRTLELESEPVTKLLQE CEEECCCCCCCCEECCCCHHHHHHHCCCCEEEECCCCHHHHHHHHHHCCCHHHHHHHHH NAYRELLLRQRINEAAQAVMAAYAIGSDLDQLAANYNVKRLTVTPADNDAVPPVAAVMES HHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCEEEEEECCCCCCCCCHHHHHHCC DEALRLRVPAAFEGLSVAGPTAAYEFHARSADGRVADASATSPAPAEVVLTVLSREGDGT CCEEEEECCCHHCCCCCCCCCCEEEEECCCCCCCEECCCCCCCCHHHHHHHHHHCCCCCC AEKDLLDVVEKALNSENVRPVADRLTVRSAEIIPYRVEATIFLYPGPEAEPVMAAAKASL HHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCEEEEEEEEEEEEECCCCCCHHHHHHHHHH QKYIASQTRLGRDIRRSAIFAALHVEGVQRVELASPLADMVLNKTQAASCTQWSVTNGGT HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEECCCCCC DE CC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA